Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: COL4A1 (collagen type IV alpha 1 chain) Sus scrofa
Analyze
Symbol: COL4A1
Name: collagen type IV alpha 1 chain
RGD ID: 13971977
Description: ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); extracellular matrix structural constituent conferring tensile strength (ortholog); platelet-derived growth factor binding (ortholog); INVOLVED IN basement membrane organization (ortholog); blood vessel morphogenesis (ortholog); brain development (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH anterior segment dysgenesis (ortholog); Axenfeld-Rieger syndrome (ortholog); Brain Small Vessel Disease 2 (ortholog); FOUND IN basement membrane (ortholog); collagen type IV trimer (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOW QUALITY PROTEIN: collagen alpha-1(IV) chain
Orthologs:
Homo sapiens (human) : COL4A1 (collagen type IV alpha 1 chain)  HGNC  Alliance
Mus musculus (house mouse) : Col4a1 (collagen, type IV, alpha 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Col4a1 (collagen type IV alpha 1 chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col4a1 (collagen type IV alpha 1 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL4A1 (collagen type IV alpha 1 chain)
Canis lupus familiaris (dog) : COL4A1 (collagen type IV alpha 1 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col4a1 (collagen type IV alpha 1 chain)
Chlorocebus sabaeus (African green monkey) : COL4A1 (collagen type IV alpha 1 chain)
Heterocephalus glaber (naked mole-rat) : Col4a1 (collagen type IV alpha 1 chain)
more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11176,858,332 - 76,997,409 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21184,372,388 - 84,460,293 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene Ontology Annotations
Molecular Pathway Annotations

Genomics

Comparative Map Data

Expression


Sequence

Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
 
More on COL4A1
NCBI Gene
Ensembl Gene
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 13971977
Created: 2019-01-29
Species: Sus scrofa
Last Modified: 2020-06-26
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.