DDX59 (DEAD-box helicase 59) - Rat Genome Database

Name: DDX59
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: DDX59 (DEAD-box helicase 59) Sus scrofa

Analyze

Symbol:

DDX59

Name:

DEAD-box helicase 59

RGD ID:

13965937

Description:

ENCODES a protein that exhibits ATP binding (inferred); helicase activity (inferred); hydrolase activity (inferred); ASSOCIATED WITH familial adult myoclonic epilepsy 5 (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN cytosol (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

probable ATP-dependent RNA helicase DDX59

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DDX59 (DEAD-box helicase 59)	HGNC	EggNOG, Ensembl, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Ddx59 (DEAD box helicase 59)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ddx59 (DEAD-box helicase 59)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ddx59 (DEAD-box helicase 59)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DDX59 (DEAD-box helicase 59)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	DDX59 (DEAD-box helicase 59)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ddx59 (DEAD-box helicase 59)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DDX59 (DEAD-box helicase 59)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ddx59 (DEAD-box helicase 59)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	23,198,798 - 23,221,067 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	10	23,198,879 - 23,222,530 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	27,675,641 - 27,699,378 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

familial adult myoclonic epilepsy 5 (ISO)

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

Hypokalemic Periodic Paralysis, Type 1 (ISO)

orofaciodigital syndrome V (ISO)

parathyroid carcinoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

cytosol (IEA)

Molecular Function

ATP binding (IEA)

helicase activity (IEA)

hydrolase activity (IEA)

nucleic acid binding (IEA)

nucleotide binding (IEA)

RNA helicase activity (IEA)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:22301074

Genomics

Comparative Map Data

DDX59
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	23,198,798 - 23,221,067 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	10	23,198,879 - 23,222,530 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	27,675,641 - 27,699,378 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DDX59
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	200,640,805 - 200,669,907 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	200,623,896 - 200,669,907 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	200,609,933 - 200,639,035 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	198,859,647 - 198,905,749 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	173,735,739 - 173,761,697 (-)	NCBI		Celera
Cytogenetic Map	1	q32.1	NCBI
HuRef	1	171,779,572 - 171,805,597 (-)	NCBI		HuRef
CHM1_1	1	202,035,807 - 202,061,751 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	199,897,729 - 199,926,835 (-)	NCBI		T2T-CHM13v2.0

Ddx59
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	136,343,009 - 136,384,019 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	136,343,009 - 136,367,896 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	136,415,271 - 136,456,192 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	136,415,271 - 136,440,158 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	138,311,848 - 138,336,728 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	138,231,682 - 138,256,562 (+)	NCBI		MGSCv36	mm8
Celera	1	139,053,386 - 139,076,977 (+)	NCBI		Celera
Cytogenetic Map	1	E4	NCBI
cM Map	1	59.73	NCBI

Ddx59
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	50,427,940 - 50,452,893 (+)	NCBI		GRCr8
mRatBN7.2	13	47,876,258 - 47,901,214 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	47,876,261 - 47,901,214 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	50,484,328 - 50,509,278 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	51,772,422 - 51,797,372 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	49,039,092 - 49,064,038 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	53,299,872 - 53,324,824 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	53,299,872 - 53,324,824 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	58,350,167 - 58,375,119 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	49,463,559 - 49,488,659 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	49,477,638 - 49,502,738 (+)	NCBI
Celera	13	48,187,527 - 48,212,481 (+)	NCBI		Celera
Cytogenetic Map	13	q13	NCBI

Ddx59
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	36,861,259 - 36,885,746 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955406	36,861,420 - 36,885,746 (-)	NCBI	ChiLan1.0	ChiLan1.0

DDX59
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	48,710,017 - 48,756,977 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	48,674,013 - 48,720,484 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	176,227,065 - 176,270,421 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	180,549,382 - 180,574,699 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	180,532,445 - 180,571,460 (-)	Ensembl	panpan1.1		panPan2

DDX59
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	2,448,991 - 2,530,076 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	2,501,195 - 2,530,069 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	2,134,545 - 2,209,019 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	2,096,602 - 2,170,953 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	2,148,048 - 2,176,559 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	2,080,622 - 2,155,112 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	2,182,117 - 2,256,638 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	2,213,129 - 2,287,634 (+)	NCBI		UU_Cfam_GSD_1.0

Ddx59
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	74,422,962 - 74,444,600 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936567	3,658,230 - 3,679,130 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936567	3,657,687 - 3,679,276 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DDX59
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	28,730,217 - 28,755,879 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	28,730,718 - 28,756,034 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	29,527,920 - 29,561,483 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ddx59
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624807	9,951,988 - 9,986,312 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624807	9,951,423 - 9,985,656 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in DDX59
1146 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium
Low	10	4	3	5	2	23	2	3	3
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005653796	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005653797	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005653799	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013978422	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021064498	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021064499	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000073	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK392886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FP312674	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01086083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000031167 ⟹ ENSSSCP00000027958

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	10	23,198,798 - 23,222,125 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000054353 ⟹ ENSSSCP00000039239

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	10	23,198,798 - 23,221,067 (-)	Ensembl

RefSeq Acc Id:

XM_005653796 ⟹ XP_005653853

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	10	23,198,879 - 23,222,529 (-)	NCBI

Sequence:

show sequence

AGCAGGGGGCCAAGAAGGGGGCGTGGCAAACGCTCCCTTCCGCCCGCCCAGCCGAGCCCCGCCT
CCCGCAGTGGCCCCGCCTCCTGCGCGCATCGGCACCTCCCAAAACCAGGAGAAGTGGATTCTGC
GCTCCGCACTGCTCCCCCGGCCGCAGGGCGGGCGTGCGGCCCAGGATCATCAGCCGGAAGCCCG
GTCCAGCGCCTCAAGGGTGGGCCGGCCCCGAGCGGGAGAGGACGTGGCCGCAGTCTGCAATATT
GAAGGATGTTTGTTCCAAGATCCCTGAAAATCAAGCGGAACGCTAGTGATGATGGTAGAAGTTG
TGTGGCCAAGAAAATCAAGCCAGAAGGTGAAAATCCTGGGCTGGACGCTGGCGGGTTTGGTCCA
GCTGTCACCTCAGACCCCAGAGAACCAGCAGCGCATCCGCATCCAGCCGGCCCGGTGGCTGAGG
GGGTTCTGGCTGGACCCGAGCAGGAGGCACAGGACAATCTCCCGGAGGAACCCGTGAAGTCCTT
TTCCAAAACCCAGCGCTGGGCAGAGCCCGGGGAGCCAGTGTGCGTGGTGTGCGGGCGGTTTGGA
GAATACATCTGTGATGAGACGGATGAAGATGTGTGTAGCCTGGAGTGTAAAGCAAAACACCTTC
TGCAGGTTAGGGCAGCCGAGGAGCAGAGAGAGCCACCCCAGGAAGGGAGTTCTGAGCCGGGGGC
TCCATGCCCTGCTTCCTACGTCTACACCGAGCACGCCTTCATCTCGAACCTCCGGGAGGACCAG
ATTGAAAACCTTAGAGGGCAGCTGGGAATCGTGGTGGAAGGGCGAGGTGTCCCCAGGCCCATCA
TTGACTTTGGGCATTGCGGCTTCCCTGAGACCTTAAACTTCAACTTGAAGACCGCAGGCTACGA
AGTTCCCACGCCCATCCAGATGCAGATGATCCCCGTGGGGCTTCTGGGCAGGGACCTCCTGGCC
AGCGCTGACACCGGCTCAGGAAAGACGGCCGCCTTCCTGCTTCCCGTTATCACGCGAGCTCTGG
TTCAGAGCAAAGCACCATCTGCGCTCGTCCTCACGCCCACGAGGGAGCTGGCCATCCAGATAGA
GCGCCAGGCCAAGGAGCTGATGGGCGGTCTGCCCCGCATGAGGACCGCGCTCCTGGTGGGGGGC
CTGCCCGCCCCCCCGCAGCTCCATCGCCTGCGCCAGCGGGTCCAGGTAATCATAGCAACTCCTG
GGCGACTTCTGGATATAATGAAGCAGAGCTCTGTGGATCTGGGCAATATCAAAATTGTAGTAGT
GGATGAAGCTGACACTATGTTAAAGATGGGCTTTCAGGAGCAAGTGCTTGACGTCTTGGAGAAC
GTGCCTCAGGATTGCCAGACCATTTTGGTGTCAGCCACGATTCCAACCCGCATAGAACAGTTGG
CGAGCCGGCTCCTGCACGACCCCGTGAGGGTCCTTGCCGGGGAGAAGAACCTGCCCTGCCCCAG
CGTGCGCCAGATCGTTTTGTGGGTGGAAGAACCAGCCAAAAAGAAAAAGTTATTTGAAATCTTG
AATGATAAGAAGCTCTTTAAGCCTCCAGTGTTAGTATTTGTGGACTGCAAACTAGGAGCAGATC
TGTTGAGCGAGGCAGTTGAGAAGATCACGGGTCTAAAAAGCACATCCATGCACTCGGAGAAGTC
CCAGATAGAAAGGAAAACCATCCTGGAGGGGTTACTTGAAGGCGACTATGACGTCGTTGTGAGC
ACGGGGGTCCTGGGAAGGGGCCTGGACTTGATCAGTGTCAAGCTCGTTGTCAATTTCGACATGC
CTTCGAGTATGGATGAGTACGTGCACCAGGTTGGAAGAGTGGGCAGATTAGGTCAAAATGGAAC
AGCAATTACATTCATCAATAACAACTCCAAGAGACTCTTCTGGGATATTGCAAAACGGGTGAAA
CCCACCGGATCCCTTCTTCCGCCTCAGTTGTTAAATTCCCCCTACCTGCATGAGCAGAAGAGAA
AGGAGCAGCAGAAAGATAAACAGATGCAGAATGACCTGGTTACAGGGGCTAATCTTATGGACAT
TATTAGAAAGCATGATAAAAGTAATTCTCAAAAATGATTTGTGATACCACTTTGCCTAATTTGT
ACTGTGCACCATCAGTGAAATTTCTGTATGTTATTACCATTTGGTTTGAGTTAATGAGACCATG
TACAGGAAACAAAAAGTTAACATGATGTAAACAATTTTAATAGACTGTCACGTTTATACAGCA

hide sequence

RefSeq Acc Id:

XM_005653797 ⟹ XP_005653854

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	10	23,198,879 - 23,222,015 (-)	NCBI

Sequence:

show sequence

GGGGCGACGCCCGTGGGGGAGGGGATAGGACGGGGCGTTGCGGGAACTGGAGCGAGCGGTGGCC
GTCTAGCCCGTGCGGGTTCGGTTCGGTTTCACCGTGAAGCCCTGCGTTCCCGGCTCTTCCTGCT
CGCGTGCGGCTGCCCCTCCCCCACGCCCTTGACCATTTCTGAGCCTTAAGAATATTGAAGGATG
TTTGTTCCAAGATCCCTGAAAATCAAGCGGAACGCTAGTGATGATGGTAGAAGTTGTGTGGCCA
AGAAAATCAAGCCAGAAGGTGAAAATCCTGGGCTGGACGCTGGCGGGTTTGGTCCAGCTGTCAC
CTCAGACCCCAGAGAACCAGCAGCGCATCCGCATCCAGCCGGCCCGGTGGCTGAGGGGGTTCTG
GCTGGACCCGAGCAGGAGGCACAGGACAATCTCCCGGAGGAACCCGTGAAGTCCTTTTCCAAAA
CCCAGCGCTGGGCAGAGCCCGGGGAGCCAGTGTGCGTGGTGTGCGGGCGGTTTGGAGAATACAT
CTGTGATGAGACGGATGAAGATGTGTGTAGCCTGGAGTGTAAAGCAAAACACCTTCTGCAGGTT
AGGGCAGCCGAGGAGCAGAGAGAGCCACCCCAGGAAGGGAGTTCTGAGCCGGGGGCTCCATGCC
CTGCTTCCTACGTCTACACCGAGCACGCCTTCATCTCGAACCTCCGGGAGGACCAGATTGAAAA
CCTTAGAGGGCAGCTGGGAATCGTGGTGGAAGGGCGAGGTGTCCCCAGGCCCATCATTGACTTT
GGGCATTGCGGCTTCCCTGAGACCTTAAACTTCAACTTGAAGACCGCAGGCTACGAAGTTCCCA
CGCCCATCCAGATGCAGATGATCCCCGTGGGGCTTCTGGGCAGGGACCTCCTGGCCAGCGCTGA
CACCGGCTCAGGAAAGACGGCCGCCTTCCTGCTTCCCGTTATCACGCGAGCTCTGGTTCAGAGC
AAAGCACCATCTGCGCTCGTCCTCACGCCCACGAGGGAGCTGGCCATCCAGATAGAGCGCCAGG
CCAAGGAGCTGATGGGCGGTCTGCCCCGCATGAGGACCGCGCTCCTGGTGGGGGGCCTGCCCGC
CCCCCCGCAGCTCCATCGCCTGCGCCAGCGGGTCCAGGTAATCATAGCAACTCCTGGGCGACTT
CTGGATATAATGAAGCAGAGCTCTGTGGATCTGGGCAATATCAAAATTGTAGTAGTGGATGAAG
CTGACACTATGTTAAAGATGGGCTTTCAGGAGCAAGTGCTTGACGTCTTGGAGAACGTGCCTCA
GGATTGCCAGACCATTTTGGTGTCAGCCACGATTCCAACCCGCATAGAACAGTTGGCGAGCCGG
CTCCTGCACGACCCCGTGAGGGTCCTTGCCGGGGAGAAGAACCTGCCCTGCCCCAGCGTGCGCC
AGATCGTTTTGTGGGTGGAAGAACCAGCCAAAAAGAAAAAGTTATTTGAAATCTTGAATGATAA
GAAGCTCTTTAAGCCTCCAGTGTTAGTATTTGTGGACTGCAAACTAGGAGCAGATCTGTTGAGC
GAGGCAGTTGAGAAGATCACGGGTCTAAAAAGCACATCCATGCACTCGGAGAAGTCCCAGATAG
AAAGGAAAACCATCCTGGAGGGGTTACTTGAAGGCGACTATGACGTCGTTGTGAGCACGGGGGT
CCTGGGAAGGGGCCTGGACTTGATCAGTGTCAAGCTCGTTGTCAATTTCGACATGCCTTCGAGT
ATGGATGAGTACGTGCACCAGGTTGGAAGAGTGGGCAGATTAGGTCAAAATGGAACAGCAATTA
CATTCATCAATAACAACTCCAAGAGACTCTTCTGGGATATTGCAAAACGGGTGAAACCCACCGG
ATCCCTTCTTCCGCCTCAGTTGTTAAATTCCCCCTACCTGCATGAGCAGAAGAGAAAGGAGCAG
CAGAAAGATAAACAGATGCAGAATGACCTGGTTACAGGGGCTAATCTTATGGACATTATTAGAA
AGCATGATAAAAGTAATTCTCAAAAATGATTTGTGATACCACTTTGCCTAATTTGTACTGTGCA
CCATCAGTGAAATTTCTGTATGTTATTACCATTTGGTTTGAGTTAATGAGACCATGTACAGGAA
ACAAAAAGTTAACATGATGTAAACAATTTTAATAGACTGTCACGTTTATACAGCA

hide sequence

RefSeq Acc Id:

XM_005653799 ⟹ XP_005653856

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	10	23,198,879 - 23,222,530 (-)	NCBI

Sequence:

show sequence

AAGCAGGGGGCCAAGAAGGGGGCGTGGCAAACGCTCCCTTCCGCCCGCCCAGCCGAGCCCCGCC
TCCCGCAGTGGCCCCGCCTCCTGCGCGCATCGGCACCTCCCAAAACCAGGAGAAGTGGATTCTG
CGCTCCGCACTGCTCCCCCGGCCGCAGGGCGGGCGTGCGGCCCAGGATCATCAGCCGGAAGCCC
GGTCCAGCGCCTCAAGGGTGGGCCGGCCCCGAGCGGGAGAGGACGTGGCCGCAGTCTGCAATAT
TGAAGGATGTTTGTTCCAAGATCCCTGAAAATCAAGCGGAACGCTAGTGATGATGGTAGAAGTT
GTGTGGCCAAGAAAATCAAGCCAGAAGGTGAAAATCCTGGGCTGGACGCTGGCGGGTTTGGTCC
AGCTGTCACCTCAGACCCCAGAGAACCAGCAGCGCATCCGCATCCAGCCGGCCCGGTGGCTGAG
GGGGTTCTGGCTGGACCCGAGCAGGAGGCACAGGACAATCTCCCGGAGGAACCCGTGAAGTCCT
TTTCCAAAACCCAGCGCTGGGCAGAGCCCGGGGAGCCAGTGTGCGTGGTGTGCGGGCGGTTTGG
AGAATACATCTGTGATGAGACGGATGAAGATGTGTGTAGCCTGGAGTGTAAAGCAAAACACCTT
CTGCAGGTTAGGGCAGCCGAGGAGCAGAGAGAGCCACCCCAGGAAGGGAGTTCTGAGCCGGGGG
CTCCATGCCCTGCTTCCTACGTCTACACCGAGCACGCCTTCATCTCGAACCTCCGGGAGGACCA
GATTGAAAACCTTAGAGGGCAGCTGGGAATCGTGGTGGAAGGGCGAGGTGTCCCCAGGCCCATC
ATTGACTTTGGGCATTGCGGCTTCCCTGAGACCTTAAACTTCAACTTGAAGACCGCAGGCTACG
AAGTTCCCACGCCCATCCAGATGCAGATGATCCCCGTGGGGCTTCTGGGCAGGGACCTCCTGGC
CAGCGCTGACACCGGCTCAGGAAAGACGGCCGCCTTCCTGCTTCCCGTTATCACGCGAGCTCTG
GTTCAGGTAATCATAGCAACTCCTGGGCGACTTCTGGATATAATGAAGCAGAGCTCTGTGGATC
TGGGCAATATCAAAATTGTAGTAGTGGATGAAGCTGACACTATGTTAAAGATGGGCTTTCAGGA
GCAAGTGCTTGACGTCTTGGAGAACGTGCCTCAGGATTGCCAGACCATTTTGGTGTCAGCCACG
ATTCCAACCCGCATAGAACAGTTGGCGAGCCGGCTCCTGCACGACCCCGTGAGGGTCCTTGCCG
GGGAGAAGAACCTGCCCTGCCCCAGCGTGCGCCAGATCGTTTTGTGGGTGGAAGAACCAGCCAA
AAAGAAAAAGTTATTTGAAATCTTGAATGATAAGAAGCTCTTTAAGCCTCCAGTGTTAGTATTT
GTGGACTGCAAACTAGGAGCAGATCTGTTGAGCGAGGCAGTTGAGAAGATCACGGGTCTAAAAA
GCACATCCATGCACTCGGAGAAGTCCCAGATAGAAAGGAAAACCATCCTGGAGGGGTTACTTGA
AGGCGACTATGACGTCGTTGTGAGCACGGGGGTCCTGGGAAGGGGCCTGGACTTGATCAGTGTC
AAGCTCGTTGTCAATTTCGACATGCCTTCGAGTATGGATGAGTACGTGCACCAGGTTGGAAGAG
TGGGCAGATTAGGTCAAAATGGAACAGCAATTACATTCATCAATAACAACTCCAAGAGACTCTT
CTGGGATATTGCAAAACGGGTGAAACCCACCGGATCCCTTCTTCCGCCTCAGTTGTTAAATTCC
CCCTACCTGCATGAGCAGAAGAGAAAGGAGCAGCAGAAAGATAAACAGATGCAGAATGACCTGG
TTACAGGGGCTAATCTTATGGACATTATTAGAAAGCATGATAAAAGTAATTCTCAAAAATGATT
TGTGATACCACTTTGCCTAATTTGTACTGTGCACCATCAGTGAAATTTCTGTATGTTATTACCA
TTTGGTTTGAGTTAATGAGACCATGTACAGGAAACAAAAAGTTAACATGATGTAAACAATTTTA
ATAGACTGTCACGTTTATACAGCA

hide sequence

RefSeq Acc Id:

XM_013978422 ⟹ XP_013833876

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	10	23,198,879 - 23,222,015 (-)	NCBI

Sequence:

show sequence

GGGGCGACGCCCGTGGGGGAGGGGATAGGACGGGGCGTTGCGGGAACTGGAGCGAGCGGTGGCC
GTCTAGCCCGTGCGGGTTCGGTTCGGTTTCACCGTGAAGCCCTGCGTTCCCGGCTCTTCCTGCT
CGCGTGCGGCTGCCCCTCCCCCACGCCCTTGACCATTTCTGAGCCTTAAGTGTAATGGAAGAGT
TTACTCCAGAATATCTCTGATGGCTGGTATTTCAGAGCGCAAGTCAGTCAATGAGCAGAGAATA
TTGAAGGATGTTTGTTCCAAGATCCCTGAAAATCAAGCGGAACGCTAGTGATGATGGTAGAAGT
TGTGTGGCCAAGAAAATCAAGCCAGAAGGTGAAAATCCTGGGCTGGACGCTGGCGGGTTTGGTC
CAGCTGTCACCTCAGACCCCAGAGAACCAGCAGCGCATCCGCATCCAGCCGGCCCGGTGGCTGA
GGGGGTTCTGGCTGGACCCGAGCAGGAGGCACAGGACAATCTCCCGGAGGAACCCGTGAAGTCC
TTTTCCAAAACCCAGCGCTGGGCAGAGCCCGGGGAGCCAGTGTGCGTGGTGTGCGGGCGGTTTG
GAGAATACATCTGTGATGAGACGGATGAAGATGTGTGTAGCCTGGAGTGTAAAGCAAAACACCT
TCTGCAGGTTAGGGCAGCCGAGGAGCAGAGAGAGCCACCCCAGGAAGGGAGTTCTGAGCCGGGG
GCTCCATGCCCTGCTTCCTACGTCTACACCGAGCACGCCTTCATCTCGAACCTCCGGGAGGACC
AGATTGAAAACCTTAGAGGGCAGCTGGGAATCGTGGTGGAAGGGCGAGGTGTCCCCAGGCCCAT
CATTGACTTTGGGCATTGCGGCTTCCCTGAGACCTTAAACTTCAACTTGAAGACCGCAGGCTAC
GAAGTTCCCACGCCCATCCAGATGCAGATGATCCCCGTGGGGCTTCTGGGCAGGGACCTCCTGG
CCAGCGCTGACACCGGCTCAGGAAAGACGGCCGCCTTCCTGCTTCCCGTTATCACGCGAGCTCT
GGTTCAGAGCAAAGCACCATCTGCGCTCGTCCTCACGCCCACGAGGGAGCTGGCCATCCAGATA
GAGCGCCAGGCCAAGGAGCTGATGGGCGGTCTGCCCCGCATGAGGACCGCGCTCCTGGTGGGGG
GCCTGCCCGCCCCCCCGCAGCTCCATCGCCTGCGCCAGCGGGTCCAGGTAATCATAGCAACTCC
TGGGCGACTTCTGGATATAATGAAGCAGAGCTCTGTGGATCTGGGCAATATCAAAATTGTAGTA
GTGGATGAAGCTGACACTATGTTAAAGATGGGCTTTCAGGAGCAAGTGCTTGACGTCTTGGAGA
ACGTGCCTCAGGATTGCCAGACCATTTTGGTGTCAGCCACGATTCCAACCCGCATAGAACAGTT
GGCGAGCCGGCTCCTGCACGACCCCGTGAGGGTCCTTGCCGGGGAGAAGAACCTGCCCTGCCCC
AGCGTGCGCCAGATCGTTTTGTGGGTGGAAGAACCAGCCAAAAAGAAAAAGTTATTTGAAATCT
TGAATGATAAGAAGCTCTTTAAGCCTCCAGTGTTAGTATTTGTGGACTGCAAACTAGGAGCAGA
TCTGTTGAGCGAGGCAGTTGAGAAGATCACGGGTCTAAAAAGCACATCCATGCACTCGGAGAAG
TCCCAGATAGAAAGGAAAACCATCCTGGAGGGGTTACTTGAAGGCGACTATGACGTCGTTGTGA
GCACGGGGGTCCTGGGAAGGGGCCTGGACTTGATCAGTGTCAAGCTCGTTGTCAATTTCGACAT
GCCTTCGAGTATGGATGAGTACGTGCACCAGGTTGGAAGAGTGGGCAGATTAGGTCAAAATGGA
ACAGCAATTACATTCATCAATAACAACTCCAAGAGACTCTTCTGGGATATTGCAAAACGGGTGA
AACCCACCGGATCCCTTCTTCCGCCTCAGTTGTTAAATTCCCCCTACCTGCATGAGCAGAAGAG
AAAGGAGCAGCAGAAAGATAAACAGATGCAGAATGACCTGGTTACAGGGGCTAATCTTATGGAC
ATTATTAGAAAGCATGATAAAAGTAATTCTCAAAAATGATTTGTGATACCACTTTGCCTAATTT
GTACTGTGCACCATCAGTGAAATTTCTGTATGTTATTACCATTTGGTTTGAGTTAATGAGACCA
TGTACAGGAAACAAAAAGTTAACATGATGTAAACAATTTTAATAGACTGTCACGTTTATACAGC
A

hide sequence

RefSeq Acc Id:

XM_021064498 ⟹ XP_020920157

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	10	23,198,879 - 23,222,069 (-)	NCBI

Sequence:

show sequence

GCGGTGGGGGGGGGCGACGTCGGGGGGAGGGGGGCTGTGTTGGGGGGAGGGGTGGGGGCGACGC
CCGTGGGGGAGGGGATAGGACGGGGCGTTGCGGGAACTGGAGCGAGCGGTGGCCGTCTAGCCCG
TGCGGGTTCGGTTCGGTTTCACCGTGAAGCCCTGCGTTCCCGGCTCTTCCTGCTCGCGTGCGGC
TGCCCCTCCCCCACGCCCTTGACCATTTCTGAGCCTTAAGGTTGTAACTCTCCACTGTCACGTA
CATTTTTGTTGGAATCTTTCCGGAAAAATGGAATCTGGCAATGTATCCCAAGGAAATATTGGGA
GAAAAGTGTTTATTAGCATATTTGGCAGTCCCCAAATTAGCTTCAAAGCCTGTTTCCCAATCGA
GGTCATTTTGCAAAAACTTGTTTTTGCTGTAAATGAGAAGAGCCTTGGTTGGGAGCTGGTACCG
GTGCCTGGTTCTGCCTCCAAGAGGCTGTGAGCTCCAAGTCACTTAGCTTCTGGGGGCTCAGCCC
GTGATGAAACAAGATAAAACATGCGTGTGCGTGTGTGGGGTGACGCTACGCTATGGCACAGGCG
CTCAGGGCTGAGCTTGGCACCTCTGTCCACTGTCCAGGTGTTACTTACTGTGGCTGCTGGTAAA
GACTCCCCTTGTGCAATAGCCCTCTTTGTGTTTCCATTTTTGACAGTGTAATGGAAGAGTTTAC
TCCAGAATATCTCTGATGGCTGGTATTTCAGAGCGCAAGTCAGTCAATGAGCAGAGAATATTGA
AGGATGTTTGTTCCAAGATCCCTGAAAATCAAGCGGAACGCTAGTGATGATGGTAGAAGTTGTG
TGGCCAAGAAAATCAAGCCAGAAGGTGAAAATCCTGGGCTGGACGCTGGCGGGTTTGGTCCAGC
TGTCACCTCAGACCCCAGAGAACCAGCAGCGCATCCGCATCCAGCCGGCCCGGTGGCTGAGGGG
GTTCTGGCTGGACCCGAGCAGGAGGCACAGGACAATCTCCCGGAGGAACCCGTGAAGTCCTTTT
CCAAAACCCAGCGCTGGGCAGAGCCCGGGGAGCCAGTGTGCGTGGTGTGCGGGCGGTTTGGAGA
ATACATCTGTGATGAGACGGATGAAGATGTGTGTAGCCTGGAGTGTAAAGCAAAACACCTTCTG
CAGGTTAGGGCAGCCGAGGAGCAGAGAGAGCCACCCCAGGAAGGGAGTTCTGAGCCGGGGGCTC
CATGCCCTGCTTCCTACGTCTACACCGAGCACGCCTTCATCTCGAACCTCCGGGAGGACCAGAT
TGAAAACCTTAGAGGGCAGCTGGGAATCGTGGTGGAAGGGCGAGGTGTCCCCAGGCCCATCATT
GACTTTGGGCATTGCGGCTTCCCTGAGACCTTAAACTTCAACTTGAAGACCGCAGGCTACGAAG
TTCCCACGCCCATCCAGATGCAGATGATCCCCGTGGGGCTTCTGGGCAGGGACCTCCTGGCCAG
CGCTGACACCGGCTCAGGAAAGACGGCCGCCTTCCTGCTTCCCGTTATCACGCGAGCTCTGGTT
CAGAGCAAAGCACCATCTGCGCTCGTCCTCACGCCCACGAGGGAGCTGGCCATCCAGATAGAGC
GCCAGGCCAAGGAGCTGATGGGCGGTCTGCCCCGCATGAGGACCGCGCTCCTGGTGGGGGGCCT
GCCCGCCCCCCCGCAGCTCCATCGCCTGCGCCAGCGGGTCCAGGTAATCATAGCAACTCCTGGG
CGACTTCTGGATATAATGAAGCAGAGCTCTGTGGATCTGGGCAATATCAAAATTGTAGTAGTGG
ATGAAGCTGACACTATGTTAAAGATGGGCTTTCAGGAGCAAGTGCTTGACGTCTTGGAGAACGT
GCCTCAGGATTGCCAGACCATTTTGGTGTCAGCCACGATTCCAACCCGCATAGAACAGTTGGCG
AGCCGGCTCCTGCACGACCCCGTGAGGGTCCTTGCCGGGGAGAAGAACCTGCCCTGCCCCAGCG
TGCGCCAGATCGTTTTGTGGGTGGAAGAACCAGCCAAAAAGAAAAAGTTATTTGAAATCTTGAA
TGATAAGAAGCTCTTTAAGCCTCCAGTGTTAGTATTTGTGGACTGCAAACTAGGAGCAGATCTG
TTGAGCGAGGCAGTTGAGAAGATCACGGGTCTAAAAAGCACATCCATGCACTCGGAGAAGTCCC
AGATAGAAAGGAAAACCATCCTGGAGGGGTTACTTGAAGGCGACTATGACGTCGTTGTGAGCAC
GGGGGTCCTGGGAAGGGGCCTGGACTTGATCAGTGTCAAGCTCGTTGTCAATTTCGACATGCCT
TCGAGTATGGATGAGTACGTGCACCAGGTTGGAAGAGTGGGCAGATTAGGTCAAAATGGAACAG
CAATTACATTCATCAATAACAACTCCAAGAGACTCTTCTGGGATATTGCAAAACGGGTGAAACC
CACCGGATCCCTTCTTCCGCCTCAGTTGTTAAATTCCCCCTACCTGCATGAGCAGAAGAGAAAG
GAGCAGCAGAAAGATAAACAGATGCAGAATGACCTGGTTACAGGGGCTAATCTTATGGACATTA
TTAGAAAGCATGATAAAAGTAATTCTCAAAAATGATTTGTGATACCACTTTGCCTAATTTGTAC
TGTGCACCATCAGTGAAATTTCTGTATGTTATTACCATTTGGTTTGAGTTAATGAGACCATGTA
CAGGAAACAAAAAGTTAACATGATGTAAACAATTTTAATAGACTGTCACGTTTATACAGCA

hide sequence

RefSeq Acc Id:

XM_021064499 ⟹ XP_020920158

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	10	23,198,879 - 23,221,081 (-)	NCBI

Sequence:

show sequence

CAGAATATTGAAGGATGTTTGTTCCAAGATCCCTGAAAATCAAGCGGAACGCTAGTGATGATGG
TAGAAGTTGTGTGGCCAAGAAAATCAAGCCAGAAGGTGAAAATCCTGGGCTGGACGCTGGCGGG
TTTGGTCCAGCTGTCACCTCAGACCCCAGAGAACCAGCAGCGCATCCGCATCCAGCCGGCCCGG
TGGCTGAGGGGGTTCTGGCTGGACCCGAGCAGGAGGCACAGGACAATCTCCCGGAGGAACCCGT
GAAGTCCTTTTCCAAAACCCAGCGCTGGGCAGAGCCCGGGGAGCCAGTGTGCGTGGTGTGCGGG
CGGTTTGGAGAATACATCTGTGATGAGACGGATGAAGATGTGTGTAGCCTGGAGTGTAAAGCAA
AACACCTTCTGCAGGTTAGGGCAGCCGAGGAGCAGAGAGAGCCACCCCAGGAAGGGAGTTCTGA
GCCGGGGGCTCCATGCCCTGCTTCCTACGTCTACACCGAGCACGCCTTCATCTCGAACCTCCGG
GAGGACCAGATTGAAAACCTTAGAGGGCAGCTGGGAATCGTGGTGGAAGGGCGAGGTGTCCCCA
GGCCCATCATTGACTTTGGGCATTGCGGCTTCCCTGAGACCTTAAACTTCAACTTGAAGACCGC
AGGCTACGAAGTTCCCACGCCCATCCAGATGCAGATGATCCCCGTGGGGCTTCTGGGCAGGGAC
CTCCTGGCCAGCGCTGACACCGGCTCAGGAAAGACGGCCGCCTTCCTGCTTCCCGTTATCACGC
GAGCTCTGGTTCAGAGCAAAGCACCATCTGCGCTCGTCCTCACGCCCACGAGGGAGCTGGCCAT
CCAGATAGAGCGCCAGGCCAAGGAGCTGATGGGCGGTCTGCCCCGCATGAGGACCGCGCTCCTG
GTGGGGGGCCTGCCCGCCCCCCCGCAGCTCCATCGCCTGCGCCAGCGGGTCCAGGTAATCATAG
CAACTCCTGGGCGACTTCTGGATATAATGAAGCAGAGCTCTGTGGATCTGGGCAATATCAAAAT
TGTAGTAGTGGATGAAGCTGACACTATGTTAAAGATGGGCTTTCAGGAGCAAGTGCTTGACGTC
TTGGAGAACGTGCCTCAGGATTGCCAGACCATTTTGGTGTCAGCCACGATTCCAACCCGCATAG
AACAGTTGGCGAGCCGGCTCCTGCACGACCCCGTGAGGGTCCTTGCCGGGGAGAAGAACCTGCC
CTGCCCCAGCGTGCGCCAGATCGTTTTGTGGGTGGAAGAACCAGCCAAAAAGAAAAAGTTATTT
GAAATCTTGAATGATAAGAAGCTCTTTAAGCCTCCAGTGTTAGTATTTGTGGACTGCAAACTAG
GAGCAGATCTGTTGAGCGAGGCAGTTGAGAAGATCACGGGTCTAAAAAGCACATCCATGCACTC
GGAGAAGTCCCAGATAGAAAGGAAAACCATCCTGGAGGGGTTACTTGAAGGCGACTATGACGTC
GTTGTGAGCACGGGGGTCCTGGGAAGGGGCCTGGACTTGATCAGTGTCAAGCTCGTTGTCAATT
TCGACATGCCTTCGAGTATGGATGAGTACGTGCACCAGGTTGGAAGAGTGGGCAGATTAGGTCA
AAATGGAACAGCAATTACATTCATCAATAACAACTCCAAGAGACTCTTCTGGGATATTGCAAAA
CGGGTGAAACCCACCGGATCCCTTCTTCCGCCTCAGTTGTTAAATTCCCCCTACCTGCATGAGC
AGAAGAGAAAGGAGCAGCAGAAAGATAAACAGATGCAGAATGACCTGGTTACAGGGGCTAATCT
TATGGACATTATTAGAAAGCATGATAAAAGTAATTCTCAAAAATGATTTGTGATACCACTTTGC
CTAATTTGTACTGTGCACCATCAGTGAAATTTCTGTATGTTATTACCATTTGGTTTGAGTTAAT
GAGACCATGTACAGGAAACAAAAAGTTAACATGATGTAAACAATTTTAATAGACTGTCACGTTT
ATACAGCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005653853	(Get FASTA)	NCBI Sequence Viewer
	XP_005653854	(Get FASTA)	NCBI Sequence Viewer
	XP_005653856	(Get FASTA)	NCBI Sequence Viewer
	XP_013833876	(Get FASTA)	NCBI Sequence Viewer
	XP_020920157	(Get FASTA)	NCBI Sequence Viewer
	XP_020920158	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000039239
	ENSSSCP00000039239.2
	ENSSSCP00005021268.1
	ENSSSCP00015007088.1
	ENSSSCP00030036664.1
	ENSSSCP00030036683.1
	ENSSSCP00040027756.1
	ENSSSCP00040027806.1
	ENSSSCP00040027849.1
	ENSSSCP00045031484.1
	ENSSSCP00045031580.1
	ENSSSCP00050012155.1
	ENSSSCP00055025910.1
	ENSSSCP00055026003.1
	ENSSSCP00055026051.1
	ENSSSCP00060020813.1
	ENSSSCP00065039280.1
	ENSSSCP00070003279.1
	ENSSSCP00070003290.1

RefSeq Acc Id:	XP_005653856 ⟸ XM_005653799
- Peptide Label:	isoform X2
- UniProtKB:	A0A287BS13 (UniProtKB/TrEMBL), A0A8D1LQR6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFVPRSLKIKRNASDDGRSCVAKKIKPEGENPGLDAGGFGPAVTSDPREPAAHPHPAGPVAEGV LAGPEQEAQDNLPEEPVKSFSKTQRWAEPGEPVCVVCGRFGEYICDETDEDVCSLECKAKHLLQ VRAAEEQREPPQEGSSEPGAPCPASYVYTEHAFISNLREDQIENLRGQLGIVVEGRGVPRPIID FGHCGFPETLNFNLKTAGYEVPTPIQMQMIPVGLLGRDLLASADTGSGKTAAFLLPVITRALVQ VIIATPGRLLDIMKQSSVDLGNIKIVVVDEADTMLKMGFQEQVLDVLENVPQDCQTILVSATIP TRIEQLASRLLHDPVRVLAGEKNLPCPSVRQIVLWVEEPAKKKKLFEILNDKKLFKPPVLVFVD CKLGADLLSEAVEKITGLKSTSMHSEKSQIERKTILEGLLEGDYDVVVSTGVLGRGLDLISVKL VVNFDMPSSMDEYVHQVGRVGRLGQNGTAITFINNNSKRLFWDIAKRVKPTGSLLPPQLLNSPY LHEQKRKEQQKDKQMQNDLVTGANLMDIIRKHDKSNSQK hide sequence

RefSeq Acc Id:	XP_005653853 ⟸ XM_005653796
- Peptide Label:	isoform X1
- UniProtKB:	A0A4X1SMN0 (UniProtKB/TrEMBL), A0A8D0J9R3 (UniProtKB/TrEMBL), A0A8D1LQR6 (UniProtKB/TrEMBL), A0A8D2CEF3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFVPRSLKIKRNASDDGRSCVAKKIKPEGENPGLDAGGFGPAVTSDPREPAAHPHPAGPVAEGV LAGPEQEAQDNLPEEPVKSFSKTQRWAEPGEPVCVVCGRFGEYICDETDEDVCSLECKAKHLLQ VRAAEEQREPPQEGSSEPGAPCPASYVYTEHAFISNLREDQIENLRGQLGIVVEGRGVPRPIID FGHCGFPETLNFNLKTAGYEVPTPIQMQMIPVGLLGRDLLASADTGSGKTAAFLLPVITRALVQ SKAPSALVLTPTRELAIQIERQAKELMGGLPRMRTALLVGGLPAPPQLHRLRQRVQVIIATPGR LLDIMKQSSVDLGNIKIVVVDEADTMLKMGFQEQVLDVLENVPQDCQTILVSATIPTRIEQLAS RLLHDPVRVLAGEKNLPCPSVRQIVLWVEEPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLL SEAVEKITGLKSTSMHSEKSQIERKTILEGLLEGDYDVVVSTGVLGRGLDLISVKLVVNFDMPS SMDEYVHQVGRVGRLGQNGTAITFINNNSKRLFWDIAKRVKPTGSLLPPQLLNSPYLHEQKRKE QQKDKQMQNDLVTGANLMDIIRKHDKSNSQK hide sequence

RefSeq Acc Id:	XP_020920157 ⟸ XM_021064498
- Peptide Label:	isoform X1
- UniProtKB:	A0A4X1SMN0 (UniProtKB/TrEMBL), A0A8D0J9R3 (UniProtKB/TrEMBL), A0A8D1LQR6 (UniProtKB/TrEMBL), A0A8D2CEF3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFVPRSLKIKRNASDDGRSCVAKKIKPEGENPGLDAGGFGPAVTSDPREPAAHPHPAGPVAEGV LAGPEQEAQDNLPEEPVKSFSKTQRWAEPGEPVCVVCGRFGEYICDETDEDVCSLECKAKHLLQ VRAAEEQREPPQEGSSEPGAPCPASYVYTEHAFISNLREDQIENLRGQLGIVVEGRGVPRPIID FGHCGFPETLNFNLKTAGYEVPTPIQMQMIPVGLLGRDLLASADTGSGKTAAFLLPVITRALVQ SKAPSALVLTPTRELAIQIERQAKELMGGLPRMRTALLVGGLPAPPQLHRLRQRVQVIIATPGR LLDIMKQSSVDLGNIKIVVVDEADTMLKMGFQEQVLDVLENVPQDCQTILVSATIPTRIEQLAS RLLHDPVRVLAGEKNLPCPSVRQIVLWVEEPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLL SEAVEKITGLKSTSMHSEKSQIERKTILEGLLEGDYDVVVSTGVLGRGLDLISVKLVVNFDMPS SMDEYVHQVGRVGRLGQNGTAITFINNNSKRLFWDIAKRVKPTGSLLPPQLLNSPYLHEQKRKE QQKDKQMQNDLVTGANLMDIIRKHDKSNSQK hide sequence

RefSeq Acc Id:	XP_005653854 ⟸ XM_005653797
- Peptide Label:	isoform X1
- UniProtKB:	A0A4X1SMN0 (UniProtKB/TrEMBL), A0A8D0J9R3 (UniProtKB/TrEMBL), A0A8D1LQR6 (UniProtKB/TrEMBL), A0A8D2CEF3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFVPRSLKIKRNASDDGRSCVAKKIKPEGENPGLDAGGFGPAVTSDPREPAAHPHPAGPVAEGV LAGPEQEAQDNLPEEPVKSFSKTQRWAEPGEPVCVVCGRFGEYICDETDEDVCSLECKAKHLLQ VRAAEEQREPPQEGSSEPGAPCPASYVYTEHAFISNLREDQIENLRGQLGIVVEGRGVPRPIID FGHCGFPETLNFNLKTAGYEVPTPIQMQMIPVGLLGRDLLASADTGSGKTAAFLLPVITRALVQ SKAPSALVLTPTRELAIQIERQAKELMGGLPRMRTALLVGGLPAPPQLHRLRQRVQVIIATPGR LLDIMKQSSVDLGNIKIVVVDEADTMLKMGFQEQVLDVLENVPQDCQTILVSATIPTRIEQLAS RLLHDPVRVLAGEKNLPCPSVRQIVLWVEEPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLL SEAVEKITGLKSTSMHSEKSQIERKTILEGLLEGDYDVVVSTGVLGRGLDLISVKLVVNFDMPS SMDEYVHQVGRVGRLGQNGTAITFINNNSKRLFWDIAKRVKPTGSLLPPQLLNSPYLHEQKRKE QQKDKQMQNDLVTGANLMDIIRKHDKSNSQK hide sequence

RefSeq Acc Id:	XP_013833876 ⟸ XM_013978422
- Peptide Label:	isoform X1
- UniProtKB:	A0A4X1SMN0 (UniProtKB/TrEMBL), A0A8D0J9R3 (UniProtKB/TrEMBL), A0A8D1LQR6 (UniProtKB/TrEMBL), A0A8D2CEF3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFVPRSLKIKRNASDDGRSCVAKKIKPEGENPGLDAGGFGPAVTSDPREPAAHPHPAGPVAEGV LAGPEQEAQDNLPEEPVKSFSKTQRWAEPGEPVCVVCGRFGEYICDETDEDVCSLECKAKHLLQ VRAAEEQREPPQEGSSEPGAPCPASYVYTEHAFISNLREDQIENLRGQLGIVVEGRGVPRPIID FGHCGFPETLNFNLKTAGYEVPTPIQMQMIPVGLLGRDLLASADTGSGKTAAFLLPVITRALVQ SKAPSALVLTPTRELAIQIERQAKELMGGLPRMRTALLVGGLPAPPQLHRLRQRVQVIIATPGR LLDIMKQSSVDLGNIKIVVVDEADTMLKMGFQEQVLDVLENVPQDCQTILVSATIPTRIEQLAS RLLHDPVRVLAGEKNLPCPSVRQIVLWVEEPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLL SEAVEKITGLKSTSMHSEKSQIERKTILEGLLEGDYDVVVSTGVLGRGLDLISVKLVVNFDMPS SMDEYVHQVGRVGRLGQNGTAITFINNNSKRLFWDIAKRVKPTGSLLPPQLLNSPYLHEQKRKE QQKDKQMQNDLVTGANLMDIIRKHDKSNSQK hide sequence

RefSeq Acc Id:	XP_020920158 ⟸ XM_021064499
- Peptide Label:	isoform X1
- UniProtKB:	A0A4X1SMN0 (UniProtKB/TrEMBL), A0A8D0J9R3 (UniProtKB/TrEMBL), A0A8D1LQR6 (UniProtKB/TrEMBL), A0A8D2CEF3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFVPRSLKIKRNASDDGRSCVAKKIKPEGENPGLDAGGFGPAVTSDPREPAAHPHPAGPVAEGV LAGPEQEAQDNLPEEPVKSFSKTQRWAEPGEPVCVVCGRFGEYICDETDEDVCSLECKAKHLLQ VRAAEEQREPPQEGSSEPGAPCPASYVYTEHAFISNLREDQIENLRGQLGIVVEGRGVPRPIID FGHCGFPETLNFNLKTAGYEVPTPIQMQMIPVGLLGRDLLASADTGSGKTAAFLLPVITRALVQ SKAPSALVLTPTRELAIQIERQAKELMGGLPRMRTALLVGGLPAPPQLHRLRQRVQVIIATPGR LLDIMKQSSVDLGNIKIVVVDEADTMLKMGFQEQVLDVLENVPQDCQTILVSATIPTRIEQLAS RLLHDPVRVLAGEKNLPCPSVRQIVLWVEEPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLL SEAVEKITGLKSTSMHSEKSQIERKTILEGLLEGDYDVVVSTGVLGRGLDLISVKLVVNFDMPS SMDEYVHQVGRVGRLGQNGTAITFINNNSKRLFWDIAKRVKPTGSLLPPQLLNSPYLHEQKRKE QQKDKQMQNDLVTGANLMDIIRKHDKSNSQK hide sequence

RefSeq Acc Id:

ENSSSCP00000039239 ⟸ ENSSSCT00000054353

RefSeq Acc Id:

ENSSSCP00000027958 ⟸ ENSSSCT00000031167

Protein Domains

DEAD-box RNA helicase Q Helicase ATP-binding Helicase C-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000024444	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005022122	UniProtKB/TrEMBL
	ENSSSCG00015013529	UniProtKB/TrEMBL
	ENSSSCG00030057418	UniProtKB/TrEMBL
	ENSSSCG00040048641	UniProtKB/TrEMBL
	ENSSSCG00045026623	UniProtKB/TrEMBL
	ENSSSCG00050021748	UniProtKB/TrEMBL
	ENSSSCG00055016471	UniProtKB/TrEMBL
	ENSSSCG00060035867	UniProtKB/TrEMBL
	ENSSSCG00065065440	UniProtKB/TrEMBL
	ENSSSCG00070002123	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000054353	ENTREZGENE
	ENSSSCT00000054353.3	UniProtKB/TrEMBL
	ENSSSCT00005034979.1	UniProtKB/TrEMBL
	ENSSSCT00015017919.1	UniProtKB/TrEMBL
	ENSSSCT00030080059.1	UniProtKB/TrEMBL
	ENSSSCT00030080093.1	UniProtKB/TrEMBL
	ENSSSCT00040065541.1	UniProtKB/TrEMBL
	ENSSSCT00040065659.1	UniProtKB/TrEMBL
	ENSSSCT00040065736.1	UniProtKB/TrEMBL
	ENSSSCT00045045380.1	UniProtKB/TrEMBL
	ENSSSCT00045045518.1	UniProtKB/TrEMBL
	ENSSSCT00050029326.1	UniProtKB/TrEMBL
	ENSSSCT00055032518.1	UniProtKB/TrEMBL
	ENSSSCT00055032647.1	UniProtKB/TrEMBL
	ENSSSCT00055032703.1	UniProtKB/TrEMBL
	ENSSSCT00060048604.1	UniProtKB/TrEMBL
	ENSSSCT00065089811.1	UniProtKB/TrEMBL
	ENSSSCT00070003957.1	UniProtKB/TrEMBL
	ENSSSCT00070003969.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.60.220	UniProtKB/TrEMBL
	3.40.50.300	UniProtKB/TrEMBL
InterPro	DEAD/DEAH_box_helicase_dom	UniProtKB/TrEMBL
	Helicase_ATP-bd	UniProtKB/TrEMBL
	Helicase_C	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	RNA_helicase_DEAD_Q_motif	UniProtKB/TrEMBL
	Znf_HIT	UniProtKB/TrEMBL
KEGG Report	ssc:100621580	UniProtKB/TrEMBL
NCBI Gene	DDX59	ENTREZGENE
PANTHER	ATP-DEPENDENT RNA HELICASE RHLE	UniProtKB/TrEMBL
	ATP-DEPENDENT RNA HELICASE RHLE-RELATED	UniProtKB/TrEMBL
Pfam	DEAD	UniProtKB/TrEMBL
	Helicase_C	UniProtKB/TrEMBL
	zf-HIT	UniProtKB/TrEMBL
PROSITE	HELICASE_ATP_BIND_1	UniProtKB/TrEMBL
	HELICASE_CTER	UniProtKB/TrEMBL
	Q_MOTIF	UniProtKB/TrEMBL
SMART	DEXDc	UniProtKB/TrEMBL
	HELICc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
UniProt	A0A287A5L9_PIG	UniProtKB/TrEMBL
	A0A287BS13	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1SMN0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0J9R3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0XI33_PIG	UniProtKB/TrEMBL
	A0A8D0XJU1_PIG	UniProtKB/TrEMBL
	A0A8D1EZS5_PIG	UniProtKB/TrEMBL
	A0A8D1EZS7_PIG	UniProtKB/TrEMBL
	A0A8D1I9E0_PIG	UniProtKB/TrEMBL
	A0A8D1KD98_PIG	UniProtKB/TrEMBL
	A0A8D1LQR6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1QRP5_PIG	UniProtKB/TrEMBL
	A0A8D2CEF3	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:96077	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM