ZNF697 (zinc finger protein 697) - Rat Genome Database

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Gene: ZNF697 (zinc finger protein 697) Sus scrofa
Analyze
Symbol: ZNF697
Name: zinc finger protein 697
RGD ID: 13953461
Description: ASSOCIATED WITH genetic disease (ortholog); Hajdu-Cheney syndrome (ortholog); PHGDH deficiency (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4101,521,763 - 101,552,753 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14101,520,252 - 101,552,266 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24111,510,612 - 111,542,617 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ZNF697
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4101,521,763 - 101,552,753 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14101,520,252 - 101,552,266 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24111,510,612 - 111,542,617 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF697
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381119,619,377 - 119,648,266 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1119,619,377 - 119,648,266 (-)EnsemblGRCh38hg38GRCh38
GRCh371120,162,000 - 120,190,889 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361119,963,523 - 119,991,913 (-)NCBINCBI36Build 36hg18NCBI36
Celera1118,392,735 - 118,421,117 (-)NCBICelera
Cytogenetic Map1p12NCBI
HuRef1118,020,283 - 118,048,676 (-)NCBIHuRef
CHM1_11120,277,510 - 120,305,895 (-)NCBICHM1_1
T2T-CHM13v2.01119,632,580 - 119,661,937 (-)NCBIT2T-CHM13v2.0
Zfp697
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39398,289,278 - 98,508,893 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl398,289,777 - 98,661,128 (+)EnsemblGRCm39 Ensembl
GRCm38398,381,962 - 98,431,951 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl398,382,461 - 98,753,812 (+)EnsemblGRCm38mm10GRCm38
MGSCv37398,186,404 - 98,235,872 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36398,467,953 - 98,517,112 (+)NCBIMGSCv36mm8
Celera399,781,228 - 99,830,126 (+)NCBICelera
Cytogenetic Map3F2.2NCBI
cM Map342.75NCBI
Zfp697
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82188,659,294 - 188,692,611 (+)NCBIGRCr8
mRatBN7.22185,970,562 - 186,003,884 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2185,970,576 - 186,001,041 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2193,645,104 - 193,649,320 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02191,454,366 - 191,458,555 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02186,277,676 - 186,281,890 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02200,546,954 - 200,579,926 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2200,572,502 - 200,576,694 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl2200,603,426 - 200,607,618 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02220,022,472 - 220,055,448 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42193,237,465 - 193,241,657 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12193,193,065 - 193,204,413 (+)NCBI
Celera2178,458,701 - 178,491,677 (+)NCBICelera
Cytogenetic Map2q34NCBI
Znf697
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543522,660,234 - 22,680,527 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543522,660,287 - 22,693,591 (-)NCBIChiLan1.0ChiLan1.0
ZNF697
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21112,221,428 - 112,271,929 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11111,845,481 - 111,874,830 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0182,898,848 - 82,927,622 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11117,896,368 - 117,925,169 (+)NCBIpanpan1.1PanPan1.1panPan2
ZNF697
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11756,573,771 - 56,604,278 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1756,576,916 - 56,578,898 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1756,575,930 - 56,603,907 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1756,222,503 - 56,252,762 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01757,446,411 - 57,476,689 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1757,448,570 - 57,476,557 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11756,482,658 - 56,512,932 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01756,515,338 - 56,544,766 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01757,104,049 - 57,134,523 (-)NCBIUU_Cfam_GSD_1.0
Znf697
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505810,131,161 - 10,160,482 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366274,328,407 - 4,334,969 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366274,330,997 - 4,357,575 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF697
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12014,144,704 - 14,173,417 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2014,144,990 - 14,170,099 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603816,776,024 - 16,804,909 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf697
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477215,135,564 - 15,142,086 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477215,135,558 - 15,171,490 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ZNF697
853 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium
Low 5 3 3 3 2 23 2 2 3
Below cutoff 5 1 2 1

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000007359   ⟹   ENSSSCP00000007164
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl4101,521,766 - 101,548,728 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000106737   ⟹   ENSSSCP00000077361
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl4101,521,763 - 101,552,753 (+)Ensembl
RefSeq Acc Id: XM_003355228   ⟹   XP_003355276
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.14101,520,256 - 101,552,266 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013988103   ⟹   XP_013843557
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.14101,520,256 - 101,552,266 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013988104   ⟹   XP_013843558
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.14101,520,252 - 101,552,266 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003355276 (Get FASTA)   NCBI Sequence Viewer  
  XP_013843557 (Get FASTA)   NCBI Sequence Viewer  
  XP_013843558 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000077361
  ENSSSCP00000077361.1
Reference Protein Sequences
RefSeq Acc Id: XP_013843558   ⟸   XM_013988104
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_003355276   ⟸   XM_003355228
- Peptide Label: isoform X1
- UniProtKB: A0A480QPH8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013843557   ⟸   XM_013988103
- Peptide Label: isoform X1
- UniProtKB: A0A480QPH8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000007164   ⟸   ENSSSCT00000007359
RefSeq Acc Id: ENSSSCP00000077361   ⟸   ENSSSCT00000106737
Protein Domains
C2H2-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000006718 Ensembl
  ENSSSCG00000063017 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000106737 ENTREZGENE
  ENSSSCT00000106737.1 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
KEGG Report ssc:100154558 UniProtKB/TrEMBL
NCBI Gene ZNF697 ENTREZGENE
PANTHER REDUCED EXPRESSION 2-RELATED UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 200 UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/TrEMBL
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt A0A480QPH8 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:95294 ENTREZGENE