LOC106504899 (olfactory receptor 8B3-like) - Rat Genome Database

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Pathways
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Gene: LOC106504899 (olfactory receptor 8B3-like) Sus scrofa
Analyze
Symbol: LOC106504899
Name: olfactory receptor 8B3-like
RGD ID: 13951746
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); odorant binding (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1950,880,852 - 50,881,787 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2956,151,588 - 56,152,669 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in LOC106504899
136 total Variants

Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_013979507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_013979507   ⟹   XP_013834961
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1950,880,852 - 50,881,787 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013834961 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000066454.1
  ENSSSCP00000080963
  ENSSSCP00000080963.1
  ENSSSCP00035017733.1
  ENSSSCP00070033557.1
Reference Protein Sequences
RefSeq Acc Id: XP_013834961   ⟸   XM_013979507
- UniProtKB: A0A4X1UVV6 (UniProtKB/TrEMBL),   A0A8W4FP53 (UniProtKB/TrEMBL),   A0A8D0ZGC0 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000054087 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00000057813 UniProtKB/TrEMBL
  ENSSSCG00035033391 UniProtKB/TrEMBL
  ENSSSCG00070020192 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000091060.1 UniProtKB/TrEMBL
  ENSSSCT00000104947 ENTREZGENE
  ENSSSCT00000104947.1 UniProtKB/TrEMBL
  ENSSSCT00035044253.1 UniProtKB/TrEMBL
  ENSSSCT00070040053.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report ssc:106504899 UniProtKB/TrEMBL
  ssc:106504905 UniProtKB/TrEMBL
NCBI Gene LOC106504899 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A4X1UVV6 ENTREZGENE, UniProtKB/TrEMBL
  A0A5G2QWZ0_PIG UniProtKB/TrEMBL
  A0A8D0ZGC0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8W4FP53 ENTREZGENE, UniProtKB/TrEMBL