POMK (protein O-mannose kinase) - Rat Genome Database
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Gene: POMK (protein O-mannose kinase) Sus scrofa
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Symbol: POMK
Name: protein O-mannose kinase
RGD ID: 13950687
Description: ENCODES a protein that exhibits carbohydrate kinase activity (ortholog); phosphotransferase activity, alcohol group as acceptor (ortholog); INVOLVED IN brain development (ortholog); carbohydrate phosphorylation (ortholog); learning or memory (ortholog); ASSOCIATED WITH congenital muscular dystrophy-dystroglycanopathy type A12 (ortholog); IMMUNODEFICIENCY 15 (ortholog); mucopolysaccharidosis type IIIC (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog)
Type: ncrna
RefSeq Status: MODEL
Also known as: protein-O-mannose kinase; SGK196
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11711,957,615 - 11,978,919 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
POMK
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11711,957,615 - 11,978,919 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
POMK
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl843,093,506 - 43,123,434 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl843,093,498 - 43,131,180 (+)EnsemblGRCh38hg38GRCh38
GRCh38843,093,515 - 43,123,434 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37842,948,649 - 42,978,323 (+)NCBIGRCh37GRCh37hg19GRCh37
GRCh37842,948,658 - 42,978,577 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36843,067,818 - 43,097,480 (+)NCBINCBI36hg18NCBI36
Celera841,897,360 - 41,927,029 (+)NCBI
Cytogenetic Map8p11.21NCBI
HuRef841,471,354 - 41,501,057 (+)NCBIHuRef
CHM1_1842,995,571 - 43,025,246 (+)NCBICHM1_1
Pomk
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39826,470,632 - 26,484,149 (-)NCBIGRCm39mm39
GRCm38825,980,604 - 25,994,121 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl825,980,604 - 25,994,133 (-)EnsemblGRCm38mm10GRCm38
MGSCv37827,091,076 - 27,104,593 (-)NCBIGRCm37mm9NCBIm37
MGSCv36827,446,149 - 27,459,666 (-)NCBImm8
Celera827,450,326 - 27,463,856 (-)NCBICelera
Cytogenetic Map8A2NCBI
Pomk
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21666,085,569 - 66,101,360 (+)NCBI
Rnor_6.0 Ensembl1670,859,280 - 70,869,634 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01670,854,825 - 70,869,653 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01670,523,618 - 70,533,991 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41670,462,989 - 70,473,362 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11670,463,253 - 70,473,628 (+)NCBI
Celera1663,999,019 - 64,009,392 (+)NCBICelera
Cytogenetic Map16q12.4NCBI
Pomk
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545713,309,564 - 13,317,825 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545713,299,176 - 13,318,535 (+)NCBIChiLan1.0ChiLan1.0
POMK
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1839,781,799 - 39,811,239 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl839,790,758 - 39,811,239 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0842,340,500 - 42,371,426 (+)NCBIMhudiblu_PPA_v0panPan3
POMK
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1622,701,736 - 22,719,229 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11622,699,552 - 22,722,773 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Pomk
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936570335,668 - 354,839 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
POMK
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1841,102,872 - 41,137,866 (+)NCBI
ChlSab1.1 Ensembl841,098,891 - 41,131,309 (+)Ensembl
Pomk
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624992196,792 - 222,638 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XR_002339904
RefSeq Status:
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11711,957,845 - 11,978,919 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002339905
RefSeq Status:
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11711,957,814 - 11,978,919 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002339906
RefSeq Status:
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11711,957,873 - 11,978,919 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002339907
RefSeq Status:
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11711,957,615 - 11,978,919 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002339908
RefSeq Status:
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11711,957,854 - 11,978,919 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002339909
RefSeq Status:
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11711,957,814 - 11,978,919 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002339910
RefSeq Status:
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11711,957,854 - 11,978,919 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002339911
RefSeq Status:
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11711,957,869 - 11,978,919 (+)NCBI
Sequence:
Protein Sequences
GenBank Protein JAA74243 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences


Additional Information

Database Acc Id Source(s)
NCBI Gene POMK ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-04-30 POMK  protein O-mannose kinase    protein-O-mannose kinase  Symbol and/or name change 5135510 APPROVED