UACA (uveal autoantigen with coiled-coil domains and ankyrin repeats) - Rat Genome Database

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Gene: UACA (uveal autoantigen with coiled-coil domains and ankyrin repeats) Sus scrofa
Analyze
Symbol: UACA
Name: uveal autoantigen with coiled-coil domains and ankyrin repeats
RGD ID: 13950405
Description: INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); intrinsic apoptotic signaling pathway in response to oxidative stress (ortholog); negative regulation of inflammatory response (ortholog); ASSOCIATED WITH Bloom syndrome (ortholog); colon cancer (ortholog); COVID-19 (ortholog); FOUND IN apoptosome (ortholog); cytoplasm (ortholog); membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1168,350,557 - 168,530,087 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11168,353,655 - 168,453,175 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21186,635,724 - 186,735,061 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
UACA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1168,350,557 - 168,530,087 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11168,353,655 - 168,453,175 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21186,635,724 - 186,735,061 (-)NCBISscrofa10.2Sscrofa10.2susScr3
UACA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1570,654,554 - 70,763,558 (-)EnsemblGRCh38hg38GRCh38
GRCh381570,654,554 - 70,778,823 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371570,946,893 - 71,055,897 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361568,733,947 - 68,842,904 (-)NCBINCBI36hg18NCBI36
Build 341568,733,947 - 68,842,904NCBI
Celera1547,837,778 - 47,946,745 (-)NCBI
Cytogenetic Map15q23NCBI
HuRef1547,782,261 - 47,891,072 (-)NCBIHuRef
CHM1_11571,065,499 - 71,174,066 (-)NCBICHM1_1
Uaca
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39960,700,488 - 60,787,713 (+)NCBIGRCm39mm39
GRCm39 Ensembl960,701,824 - 60,787,652 (+)Ensembl
GRCm38960,793,206 - 60,880,431 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl960,794,542 - 60,880,370 (+)EnsemblGRCm38mm10GRCm38
MGSCv37960,642,355 - 60,728,177 (+)NCBIGRCm37mm9NCBIm37
MGSCv36960,592,554 - 60,678,376 (+)NCBImm8
Celera958,019,203 - 58,105,030 (+)NCBICelera
Cytogenetic Map9BNCBI
Uaca
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2861,259,415 - 61,347,789 (+)NCBI
Rnor_6.0 Ensembl865,686,648 - 65,774,989 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0865,686,586 - 65,774,940 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0865,436,288 - 65,524,224 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4864,730,633 - 65,118,809 (+)NCBIRGSC3.4rn4RGSC3.4
Celera860,685,577 - 60,772,913 (+)NCBICelera
Cytogenetic Map8q24NCBI
Uaca
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554506,122,439 - 6,197,177 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554506,122,271 - 6,195,345 (+)NCBIChiLan1.0ChiLan1.0
UACA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11568,375,908 - 68,477,574 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1568,375,939 - 68,477,395 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01549,607,308 - 49,711,188 (-)NCBIMhudiblu_PPA_v0panPan3
UACA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13034,376,072 - 34,467,278 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3034,376,077 - 34,467,206 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3034,309,793 - 34,355,595 (-)NCBI
ROS_Cfam_1.03034,575,880 - 34,668,746 (-)NCBI
UMICH_Zoey_3.13034,500,752 - 34,546,442 (-)NCBI
UNSW_CanFamBas_1.03034,562,448 - 34,607,964 (-)NCBI
UU_Cfam_GSD_1.03034,813,893 - 34,859,690 (-)NCBI
Uaca
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640112,364,382 - 112,464,821 (-)NCBI
SpeTri2.0NW_00493647130,213,742 - 30,312,873 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UACA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12612,693,208 - 12,792,900 (+)NCBI
ChlSab1.1 Ensembl2612,749,774 - 12,795,279 (+)Ensembl
Vero_WHO_p1.0NW_023666048128,693,327 - 128,794,723 (-)NCBI
Uaca
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247813,106,658 - 3,189,325 (+)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 1 1 1 3 1 3
Low 10 3 3 4 1 20 1 1
Below cutoff 2

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000005485   ⟹   ENSSSCP00000005348
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1168,355,643 - 168,530,087 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000037935   ⟹   ENSSSCP00000041357
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1168,353,119 - 168,401,289 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000040641   ⟹   ENSSSCP00000039647
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1168,353,659 - 168,453,172 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000042141   ⟹   ENSSSCP00000055448
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1168,353,119 - 168,399,156 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000049297   ⟹   ENSSSCP00000044530
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1168,350,557 - 168,390,126 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000051009   ⟹   ENSSSCP00000038638
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1168,350,557 - 168,401,301 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000058328   ⟹   ENSSSCP00000052194
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1168,353,659 - 168,453,172 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000063140   ⟹   ENSSSCP00000047432
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1168,353,655 - 168,401,291 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000075774   ⟹   ENSSSCP00000064623
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1168,353,658 - 168,401,310 (-)Ensembl
RefSeq Acc Id: XM_003121767   ⟹   XP_003121815
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11168,353,655 - 168,401,349 (-)NCBI
Sequence:
RefSeq Acc Id: XM_003353467   ⟹   XP_003353515
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11168,353,655 - 168,453,175 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005659879   ⟹   XP_005659936
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11168,353,655 - 168,452,894 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013993354   ⟹   XP_013848808
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11168,353,655 - 168,452,495 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021100801   ⟹   XP_020956460
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11168,353,655 - 168,453,175 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021100804   ⟹   XP_020956463
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11168,353,655 - 168,401,310 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021100807   ⟹   XP_020956466
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11168,353,655 - 168,452,495 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021100814   ⟹   XP_020956473
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11168,353,655 - 168,429,849 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_020956460   ⟸   XM_021100801
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_003353515   ⟸   XM_003353467
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005659936   ⟸   XM_005659879
- Peptide Label: isoform X6
- UniProtKB: F1SIT4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020956466   ⟸   XM_021100807
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_013848808   ⟸   XM_013993354
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_020956473   ⟸   XM_021100814
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_003121815   ⟸   XM_003121767
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_020956463   ⟸   XM_021100804
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: ENSSSCP00000005348   ⟸   ENSSSCT00000005485
RefSeq Acc Id: ENSSSCP00000039647   ⟸   ENSSSCT00000040641
RefSeq Acc Id: ENSSSCP00000044530   ⟸   ENSSSCT00000049297
RefSeq Acc Id: ENSSSCP00000052194   ⟸   ENSSSCT00000058328
RefSeq Acc Id: ENSSSCP00000038638   ⟸   ENSSSCT00000051009
RefSeq Acc Id: ENSSSCP00000064623   ⟸   ENSSSCT00000075774
RefSeq Acc Id: ENSSSCP00000055448   ⟸   ENSSSCT00000042141
RefSeq Acc Id: ENSSSCP00000047432   ⟸   ENSSSCT00000063140
RefSeq Acc Id: ENSSSCP00000041357   ⟸   ENSSSCT00000037935
Protein Domains
ANK_REP_REGION


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000004973 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00070005357 UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000005348 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00000038638 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00000039647 UniProtKB/TrEMBL
  ENSSSCP00000041357 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00000044530 UniProtKB/TrEMBL
  ENSSSCP00000047432 UniProtKB/TrEMBL
  ENSSSCP00000052194 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00000055448 UniProtKB/TrEMBL
  ENSSSCP00000064623 UniProtKB/TrEMBL
  ENSSSCP00070009077 UniProtKB/TrEMBL
  ENSSSCP00070009093 UniProtKB/TrEMBL
  ENSSSCP00070009117 UniProtKB/TrEMBL
  ENSSSCP00070009120 UniProtKB/TrEMBL
  ENSSSCP00070009150 UniProtKB/TrEMBL
  ENSSSCP00070009170 UniProtKB/TrEMBL
  ENSSSCP00070009186 UniProtKB/TrEMBL
  ENSSSCP00070009202 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000005485 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00000037935 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00000040641 UniProtKB/TrEMBL
  ENSSSCT00000042141 UniProtKB/TrEMBL
  ENSSSCT00000049297 UniProtKB/TrEMBL
  ENSSSCT00000051009 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00000058328 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00000063140 UniProtKB/TrEMBL
  ENSSSCT00000075774 UniProtKB/TrEMBL
  ENSSSCT00070011027 UniProtKB/TrEMBL
  ENSSSCT00070011046 UniProtKB/TrEMBL
  ENSSSCT00070011074 UniProtKB/TrEMBL
  ENSSSCT00070011077 UniProtKB/TrEMBL
  ENSSSCT00070011107 UniProtKB/TrEMBL
  ENSSSCT00070011128 UniProtKB/TrEMBL
  ENSSSCT00070011145 UniProtKB/TrEMBL
  ENSSSCT00070011160 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_dom UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
  UACA UniProtKB/TrEMBL
KEGG Report ssc:100523347 UniProtKB/TrEMBL
NCBI Gene UACA ENTREZGENE
PANTHER PTHR24173:SF23 UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/TrEMBL
PRINTS ANKYRIN UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
SMART ANK UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/TrEMBL
UniProt A0A287A4D9_PIG UniProtKB/TrEMBL
  A0A287A6Z5_PIG UniProtKB/TrEMBL
  A0A287ABL8_PIG UniProtKB/TrEMBL
  A0A287AKH9_PIG UniProtKB/TrEMBL
  A0A287AU41_PIG UniProtKB/TrEMBL
  A0A287B7Y7_PIG UniProtKB/TrEMBL
  A0A287BH40_PIG UniProtKB/TrEMBL
  A0A481AX85_PIG UniProtKB/TrEMBL
  A0A4X1T0D8_PIG UniProtKB/TrEMBL
  A0A4X1T0I0_PIG UniProtKB/TrEMBL
  A0A4X1T1D6_PIG UniProtKB/TrEMBL
  A0A4X1T1F1_PIG UniProtKB/TrEMBL
  A0A4X1T2X7_PIG UniProtKB/TrEMBL
  A0A4X1T321_PIG UniProtKB/TrEMBL
  A0A4X1T323_PIG UniProtKB/TrEMBL
  A0A4X1T387_PIG UniProtKB/TrEMBL
  A0A5G2R266_PIG UniProtKB/TrEMBL
  F1SIT4 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:94625 ENTREZGENE