LDLR (low density lipoprotein receptor)

	Submit Data \| Help \| Video Tutorials \| News \| Publications \| FTP Download \| REST API \| Citing RGD \| Contact
	Search RGD Grant Resources Citing RGD About Us Contact Us Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References FTP Download Submit Data OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease Find Models new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive Pathways Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
	Advanced Search (OLGA)

Gene: LDLR (low density lipoprotein receptor) Sus scrofa

Analyze

Symbol:

LDLR

Name:

low density lipoprotein receptor

RGD ID:

13943666

Description:

ENCODES a protein that exhibits amyloid-beta binding (ortholog); identical protein binding (ortholog); low-density lipoprotein particle binding (ortholog); INVOLVED IN transcytosis; aging (ortholog); amyloid-beta clearance (ortholog); PARTICIPATES IN atherosclerosis pathway; ASSOCIATED WITH Alcoholic Fatty Liver (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Animal Toxoplasmosis (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog); INTERACTS WITH ezetimibe; simvastatin

Type:

protein-coding

RefSeq Status:

VALIDATED

Also known as:

LDL receptor; low-density lipoprotein receptor

RGD Orthologs

Human

Mouse

Rat

Chinchilla

Bonobo

Dog

Squirrel

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	69,828,332 - 69,864,823 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	69,828,348 - 69,864,823 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	70,193,426 - 70,206,818 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Alcoholic Fatty Liver (ISO)

Alzheimer's disease (ISO)

amyotrophic lateral sclerosis type 1 (ISO)

Animal Toxoplasmosis (ISO)

aortic dissection (ISO)

arteriosclerosis (ISO)

atherosclerosis (ISO)

carotid artery dissection (ISO)

Carotid Artery Dissection, Internal (ISO)

carotid artery occlusion (ISO)

coronary artery disease (ISO)

Coronary Disease (ISO)

COVID-19 (ISO)

Dyslipidemias (ISO)

Experimental Diabetes Mellitus (ISO)

familial hypercholesterolemia (IEA,ISO)

familial hyperlipidemia (ISO)

fatty liver disease (ISO)

genetic disease (ISO)

hepatitis C (ISO)

Hypercholesterolemia (ISO)

Hyperlipoproteinemia Type II (ISO)

hyperlipoproteinemia type III (ISO)

Hyperplasia (ISO)

Hypertriglyceridemia (ISO)

kidney disease (ISO)

migraine without aura (ISO)

non-alcoholic fatty liver disease (ISO)

obesity (ISO)

Q fever (ISO)

Reperfusion Injury (ISO)

Smith-Lemli-Opitz syndrome (ISO)

Stroke (ISO)

systemic lupus erythematosus (ISO)

xanthomatosis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

ezetimibe (EXP)

simvastatin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

aging (ISO)

amyloid-beta clearance (ISO)

amyloid-beta clearance by cellular catabolic process (IEA,ISO)

artery morphogenesis (IEA,ISO)

cellular response to fatty acid (IEA,ISO)

cellular response to low-density lipoprotein particle stimulus (ISO)

cholesterol homeostasis (IEA,ISO)

cholesterol import (IEA,ISO)

cholesterol metabolic process (IEA,ISO)

cholesterol transport (ISO)

endocytosis (IEA,ISO)

high-density lipoprotein particle clearance (IEA,ISO)

intestinal cholesterol absorption (ISO)

lipid metabolic process (ISO)

lipid transport (IEA)

lipoprotein catabolic process (IEA,ISO)

lipoprotein metabolic process (ISO)

long-term memory (IEA,ISO)

low-density lipoprotein particle clearance (IEA,ISO)

negative regulation of amyloid fibril formation (IEA,ISO)

negative regulation of astrocyte activation (IEA,ISO)

negative regulation of gene expression (IEA,ISO)

negative regulation of microglial cell activation (IEA,ISO)

negative regulation of protein metabolic process (ISO)

phagocytosis (IEA,ISO)

phospholipid transport (IEA,ISO)

plasma lipoprotein particle clearance (ISO)

positive regulation of gene expression (IEA,ISO)

positive regulation of inflammatory response (IEA,ISO)

positive regulation of lysosomal protein catabolic process (IEA,ISO)

positive regulation of triglyceride biosynthetic process (IEA,ISO)

positive regulation of triglyceride catabolic process (ISO)

receptor-mediated endocytosis (IEA,ISO)

receptor-mediated endocytosis involved in cholesterol transport (ISO)

regulation of cholesterol metabolic process (IEA,ISO)

regulation of phosphatidylcholine catabolic process (IEA,ISO)

regulation of protein metabolic process (ISO)

response to caloric restriction (IEA,ISO)

response to estradiol (ISO)

response to estrogen (ISO)

response to ethanol (ISO)

response to glucagon (ISO)

response to hormone (ISO)

response to hypoxia (ISO)

transcytosis (IMP)

Cellular Component

apical part of cell (IEA,ISO)

basolateral plasma membrane (IEA,ISO)

caveola (ISO)

cell surface (IEA,ISO,ISS)

clathrin-coated pit (IEA)

early endosome (IEA,ISO,ISS)

endosome (ISO)

external side of plasma membrane (ISO)

Golgi apparatus (ISS)

integral component of membrane (IEA)

late endosome (IEA,ISO,ISS)

low-density lipoprotein particle (IEA)

lysosome (IEA,ISO,ISS)

PCSK9-LDLR complex (ISO)

plasma membrane (ISO)

receptor complex (ISO)

recycling endosome membrane (ISO)

somatodendritic compartment (IEA,ISO)

sorting endosome (IEA,ISO)

Molecular Function

amyloid-beta binding (IEA,ISO)

calcium ion binding (IEA)

identical protein binding (ISO)

low-density lipoprotein particle binding (IEA,ISO)

low-density lipoprotein particle receptor activity (IEA,ISO)

protease binding (ISO)

protein binding (ISO)

very-low-density lipoprotein particle receptor activity (IEA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

atherosclerosis pathway (ISO)

References

Additional References at PubMed

PMID:8344216	PMID:9556295	PMID:10064736	PMID:14681463	PMID:15140193	PMID:16303770	PMID:19544207	PMID:24954195

Genomics

Comparative Map Data

LDLR
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	69,828,332 - 69,864,823 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	69,828,348 - 69,864,823 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	70,193,426 - 70,206,818 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LDLR
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	19	11,089,362 - 11,133,816 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38.p13 Ensembl	19	11,089,462 - 11,133,820 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	19	11,089,432 - 11,133,820 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	19	11,200,139 - 11,244,496 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	11,061,132 - 11,105,490 (+)	NCBI	NCBI36		hg18	NCBI36
Build 34	19	11,061,131 - 11,105,490	NCBI
Celera	19	11,094,887 - 11,139,322 (+)	NCBI
Cytogenetic Map	19	p13.2	NCBI
HuRef	19	10,777,128 - 10,820,847 (+)	NCBI		HuRef
CHM1_1	19	11,201,264 - 11,245,760 (+)	NCBI		CHM1_1

Ldlr
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	21,634,872 - 21,661,215 (+)	NCBI	GRCm39		mm39
GRCm39 Ensembl	9	21,634,779 - 21,661,215 (+)	Ensembl
GRCm38	9	21,723,576 - 21,749,919 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	21,723,483 - 21,749,919 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	21,528,038 - 21,554,363 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	9	21,474,180 - 21,498,819 (+)	NCBI			mm8
Celera	9	18,993,187 - 19,019,513 (+)	NCBI		Celera
Cytogenetic Map	9	A3	NCBI
cM Map	9	7.87	NCBI

Ldlr
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	8	20,270,020 - 20,292,981 (+)	NCBI
Rnor_6.0 Ensembl	8	22,750,336 - 22,774,903 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	8	22,750,425 - 22,773,305 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	8	22,804,325 - 22,827,199 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	20,824,040 - 20,846,920 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	8	20,824,039 - 20,846,920 (+)	NCBI
Celera	8	21,660,761 - 21,683,616 (+)	NCBI		Celera
RH 3.4 Map	8	178.16	RGD
RH 3.4 Map	8	178.16	RGD
Cytogenetic Map	8	q13	NCBI

Ldlr
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955495	2,114,434 - 2,138,056 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955495	2,114,702 - 2,135,584 (+)	NCBI	ChiLan1.0	ChiLan1.0

LDLR
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	19	11,357,311 - 11,402,736 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	11,357,311 - 11,396,791 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	19	10,640,225 - 10,683,728 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

LDLR
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	20	50,048,736 - 50,152,355 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	20	50,115,175 - 50,152,443 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Ldlr
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936659	1,259,405 - 1,300,545 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LDLR
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	10,062,204 - 10,091,780 (+)	NCBI
ChlSab1.1 Ensembl	6	10,062,790 - 10,091,377 (+)	Ensembl

Ldlr
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624828	2,999,122 - 3,021,893 (+)	NCBI

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium	7	1		4		4		1	3
Low	3	3	3	1	2	19	2	2
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001206354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021080444	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021080449	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021080452	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021080457	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF022657	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF065990	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF067952	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF118147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK235468	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK236400	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK348654	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK395849	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FP102365	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FS668646	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01044454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KF717533	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	S64272	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSSSCT00000029210 ⟹ ENSSSCP00000021308

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	69,828,332 - 69,864,819 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000033970 ⟹ ENSSSCP00000030589

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	69,828,383 - 69,864,812 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000068362 ⟹ ENSSSCP00000071214

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	69,840,686 - 69,864,818 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000069615 ⟹ ENSSSCP00000070721

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	69,833,839 - 69,864,820 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000070645 ⟹ ENSSSCP00000070219

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	69,834,083 - 69,864,820 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000081506 ⟹ ENSSSCP00000060758

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	69,829,528 - 69,864,819 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000091324 ⟹ ENSSSCP00000059974

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	69,831,308 - 69,864,823 (+)	Ensembl

RefSeq Acc Id:

NM_001206354 ⟹ NP_001193283

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	69,828,383 - 69,863,876 (+)	NCBI

Sequence:

show sequence

CTCTACGAGAAACCTCACATTGAAATGCTGCAAATGACTGGGGCCCCGCGTGCAGTCGCGTCCG
GGCCGCGCGAAGCCCGGATTTCAAGAGCGCACACAGTGAACAGGAGCCCGGGCCAGGGAGCTGC
AGGCGGAGGCTGGAAGCATGAAGTCCACGGGCTGGGTCCTGCGATGGGCTGTCGCCTTGCTCAT
TGCTGCGGTGGCAGCTGCAGTGGAAGAGAAATGTGGGAGAAACGAGTTCCAGTGCCGAGACGGG
AAATGCATCTCCTACAAGTGGATTTGTGATGGGAACACCGAGTGCAAGGACGGGTCCGATGAGT
CCCTGGAGACGTGCATGTCTGTCACCTGCAAGATAGGGGACTTTAGCTGTGGGGGCCGTGTCAA
CCGCTGCATTCCTGAGTCTTGGAGGTGTGACGGTCAGCAGGACTGCGAGAATGGCTCAGATGAG
GAAGGCTGTTCCCCCAAGACGTGCTCCCAAGATGAGTTCCGCTGCCAGGACGGCAAGTGCATCG
CCCCAAAGTTTGTCTGTGACTCGGACCGGGACTGCCTGGACGGCTCGGATGAAGCATCCTGCCC
CACACCCACCTGTGGCCCCGCCAGCTTCCAGTGCAACAGCTCCACCTGCATCCCTGAGCTGTGG
GCCTGTGATGGTGATCCTGACTGCGAGGACGGCTCAGACGAGTGGCCACAGCACTGCAGGAGCC
ACAGCTCATCACTCCCCGAGAGGAGCAACAACCCCTGCTCAGCCCTCGAGTTCCACTGCCACAG
TGGCGAGTGCATCCACTCCAGCTGGCGCTGCGACGGAGACACTGACTGCAAGGACAAGTCTGAC
GAGGAGAACTGCGATGTGGCCACGTGCCGGCCTGACGAGTTCCAGTGCTCAGACGGGACCTGCA
TCCATGGTAGCCGGCAGTGCGACAGGGAATATGACTGCAAGGACATGAGCGACGAGCAGGGCTG
TGTCAATGCGACTCTGTGCGAGGGGCCCAACAAGTTCAAGTGTCAAAGCGGCGAGTGCATCTCC
TTGGACAAAGTGTGCAACTCAGTCAGGGACTGCCGGGACTGGTCAGACGAGCCCCTCAAGGAGT
GTGGGACCAACGAGTGTCTGGACAACAAGGGTGGCTGCTCCCATATCTGCAATGACCTCAAGAT
CGGCTATGAGTGCCTCTGTCCCGAGGGCTTCCAGCTGGTGGATAAGCACAGATGCGAAGATATC
GACGAGTGTCAGGACCCAGACGCCTGCAGCCAGATCTGCGTGAACCTCGAGGGCAGCTACAAGT
GCCAGTGTGAGGAGGGCTTCCAGCTGGAGCCTCTCACCAAGGCCTGCAAGGCCATAGGCACCAT
CGCCTACCTCTTCTTCACCAACCGCCACGAGGTGAGGAAGATGACCCTGGACCGTAGTGAGTAC
ACCAGCCTCATCCCCAACCTGAAGAACGTGGTCGCTCTGGACACTGAGGTGGCCAGCAATAGAA
TCTACTGGTCTGACCTGTCTCAGAGGAAGATCTACAGTACCCAGATCGACAGGGCCCCCAGCTT
TTCCTCCTATGACACCATTATTGGCGAAGATCTCCAGGCCCCCGATGGGCTGGCGGTGGACTGG
ATCCACAGCAACATATACTGGACTGACTCCATCCTGGGCACTGTCTCCGTGGCTGACACCAAGG
GCGTGAAGAGGAAGACTCTCTTCCAAGAGAAAGGCTCCAAGCCACGGGCCATTGTGGTGGACCC
TGTCCATGGCTTCATGTACTGGACTGATTGGGGAACCCCCGCCAAGATCAAGAAGGGCGGCCTG
AACGGAGTGGACGTCTACTCGCTGGTGACGGAGGACATCCAGTGGCCCAATGGCATCACCCTGG
ATCTTTCTGGCGGCCGCCTTTACTGGGTCGACTCCAAGCTCCACTCCATCTCCAGCATCGATGT
CAACGGGGGGAACCGGAAGACCGTCCTGGAGGACAAGACGAAGCTGGCGCACCCCTTCTCCTTG
GCCATTTTTGAGGATAAAGTATTTTGGACAGATATAATCAACGAAGCCATTTTCAGTGCCAACC
GCCTCACAGGCTCGGACATACATTTGATGGCAGAAAACCTGTTGTCTCCAGAGGACATTGTCCT
TTTCCACAACCTCACACAGCCGAGAGGGGTGAACTGGTGTGAAAGGACCGCCCTCCAAAACGGT
GGCTGCCAGTACCTGTGTCTGCCAGCTCCACAGATCAACCCACGCTCGCCGAAGTTCACCTGTG
CCTGCCCGGATGGCATGCTGTTGGCCAAGGACATGAGGAGCTGTCTCACAGAGACTGAACCTGC
AGGAACCACCCAGGGACCTTCCATGGTCAACTCGACAGCTGTGGGGCCAAAGCACACCGCCAGC
TCTGAGCTCACCACAGCCGAGTCAGTGACGATGTCCCAACATGCCCTGGGCGACGTTGCTGGCC
GAGGAGTCACTGAGAAGCCCCAGAGCGTGGGTGCTCTGTACATTGTCCTCCCCATTGCACTGCT
CATCCTCCTCTTCTTCGGAACCTTCCTCCTCTGGAAGAACTGGAGGCTTAAGAGCATCAACAGC
ATTAACTTCGACAACCCTGTGTACCAGAAGACCACGGAAGACGAGGTCCACATCTGCCGCAGCC
AGGACGGCTACACCTACCCCTCGAGACAGATGGTCAGCTTGGAGGATGACGTGGCGTGAGCTGC
TGCCTTGAGCCCTGTCCCACCTCAGAAGCTGCTGCTGGCCACTCACCGGCAGGAAGAACACTTT
CTCCTTGGACCCCTGAACTGCCCAAAACCCTTCCTGAGACTGAGGCGCCAAAAGCACTGTTGGT
GGTTACAGCCCTGGTGCCATCTGCTTGTCTGTCAGAGTTTTGTTTTATATATTTATTGTCTGGG
AGGCAGAACAGGCTTCTGATGGCGCCTGGGCTGGGAATGGGTTAGGGTGGCTTTTTTTCTTCCT
TTCTTTCTTGACATGTGAAGAAGAGGAGCAAGGTGGATGAGCTGGGACGCCTGAGCTTTTCTCC
CCCTTGGCATGCACCGCCTGAGAGACTTAGGGACTGATGGATGGAGGGATACAGAAGGAGAGGG
TTAGGGGCTCTGAACACAGCAGGGCAGGTGATGCCCACAGGGTCCCCGGGGAGTTCCCGAGCCC
CACACTCAGGACTGAATGTGTTTACCTCTGCCTGGTGAACCTGCTGGGGCGGCCAGAGTTGGCT
TTTGCTCTGCTACCCCCAGGTCAGGATCAGATGAGGGTTTCCAAGCTGGGTTTGCCCTCTCCAT
AAGCCAGGGAGGGGCCTCTGGCAATGGCTGAATCTAGCCTTCTTGGGGGCTGCACCCACTGAGA
CCCATTCATTCACCAAAACCCCAGCCACAACCCCAGGGAAAGCTCAAGCCGCTCGTCGCTCTTA
ATATGTATTAAGTGCCTG

hide sequence

RefSeq Acc Id:

XM_021080444 ⟹ XP_020936103

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	69,836,634 - 69,864,823 (+)	NCBI

Sequence:

show sequence

TACTGTCTTCTGTTCTTTTTGGTGGGGTGGGGCTTGCCTGTGGCATATAGAAGTTCTTGGGCCA
GGGATCAAACCCAGGCCACAGTTGCAACCCAAGGTGCTACAGTGCTAATGCAAGATCCTTGACC
TGCTGTGCCATAGGGGAAATTCCAAGATGTACTGTCTTCTGGAAGGTTCTGCATTCTGTACTGT
AAGGTTCTCCCAGGAATGGAAGATATGGACATGTACTTTCTGCCTCATTCATGAAGCTTTCATT
CATTGCCCTTGTGCAAGAAGAGCTGATGGCGAAATTTTGCACAAACCATTAAACTACTTTTTGG
TGGAAGAGAAATGTGGGAGAAACGAGTTCCAGTGCCGAGACGGGAAATGCATCTCCTACAAGTG
GATTTGTGATGGGAACACCGAGTGCAAGGACGGGTCCGATGAGTCCCTGGAGACGTGCATGTCT
GTCACCTGCAAGATAGGGGACTTTAGCTGTGGGGGCCGTGTCAACCGCTGCATTCCTGAGTCTT
GGAGGTGTGACGGTCAGCAGGACTGCGAGAATGGCTCAGATGAGGAAGGCTGTTCCCCCAAGAC
GTGCTCCCAAGATGAGTTCCGCTGCCAGGACGGCAAGTGCATCGCCCCAAAGTTTGTCTGTGAC
TCGGACCGGGACTGCCTGGACGGCTCGGATGAAGCATCCTGCCCCACACCCACCTGTGGCCCCG
CCAGCTTCCAGTGCAACAGCTCCACCTGCATCCCTGAGCTGTGGGCCTGTGATGGTGATCCTGA
CTGCGAGGACGGCTCAGACGAGTGGCCACAGCACTGCAGGAGCCACAGCTCATCACTCCCCGAG
AGGAGCAACAACCCCTGCTCAGCCCTCGAGTTCCACTGCCACAGTGGCGAGTGCATCCACTCCA
GCTGGCGCTGCGACGGAGACACTGACTGCAAGGACAAGTCTGACGAGGAGAACTGCGATGTGGC
CACGTGCCGGCCTGACGAGTTCCAGTGCTCAGACGGGACCTGCATCCATGGTAGCCGGCAGTGC
GACAGGGAATATGACTGCAAGGACCTGAGCGACGAGCAGGGCTGTGTCAATGTGACTCTGTGCG
AGGGGCCCAACAAGTTCAAGTGTCAAAGCGGCGAGTGCATCTCCTTGGACAAAGTGTGCAACTC
AGTCAGGGACTGCCGGGACTGGTCAGACGAGCCCCTCAAGGAGTGTGGGACCAACGAGTGTCTG
GACAACAAGGGTGGCTGCTCCCATATCTGCAATGACCTCAAGATCGGCTATGAGTGCCTCTGTC
CCGAGGGCTTCCAGCTGGTGGATAAGCACAGATGCGAAGATATCGACGAGTGTCAGGACCCAGA
CGCCTGCAGCCAGATCTGCGTGAACCTCGAGGGCAGCTACAAGTGCCAGTGTGAGGAGGGCTTC
CAGCTGGAGCCTCTCACCAAGGCCTGCAAGGCCATAGGCACCATCGCCTACCTCTTCTTCACCA
ACCGCCACGAGGTGAGGAAGATGACCCTGGACCGTAGTGAGTACACCAGCCTCATCCCCAACCT
GAAGAACGTGGTCGCTCTGGACACTGAGGTGGCCAGCAACAGAATCTACTGGTCTGATCTGTCT
CAGAGGAAGATCTACAGTACCCAGATCAACAGGGCCCCCAGCTTTTCCTCCTATGACACCATTA
TTGGCGAAGATCTCCAGGCCCCCGATGGGCTGGCGGTGGACTGGATCCACAGCAACATATACTG
GACTGACTCCATCCTGGGCACTGTCTCCGTGGCTGACACCAAGGGCGTGAAGAGGAAGACTCTC
TTCCAAGAGAAAGGCTCCAAGCCACGGGCCATTGTGGTGGACCCTGTCCATGGCTTCATGTACT
GGACTGATTGGGGAACCCCCGCCAAGATCAAGAAGGGCGGCCTGAACGGAGTGGACGTCTACTC
GCTGGTGACGGAGGACATCCAGTGGCCCAATGGCATCACCCTGGATCTTTCTGGCGGCCGCCTT
TACTGGGTCGACTCCAAGCTCCACTCCATCTCCAGCATCGATGTCAACGGGGGGAACCGGAAGA
CCGTCCTGGAGGACAAGACGAAGCTGGCGCACCCCTTCTCCTTGGCCATTTTTGAGGATAAAGT
ATTTTGGACAGATGTAATCAACGAAGCCATTTTCAGTGCCAACCGCCTCACAGGCTCGGACATA
CATTTGATGGCAGAAAACCTGTTGTCTCCAGAGGACATTGTCCTTTTCCACAACCTCACACAGC
CGAGAGGTAAAGATGGGGTGGTCACCCCCACTGCCAGTGCCCTGGAATTTTCTAGAAATTTTCT
GATCTCGTTCTTGCCCTGTCTCCCTGCCTTTTCCACCTCAGGGGTGAACTGGTGTGAAAGGACC
GCCCTCCAAAACGGTGGCTGCCAGTACCTGTGTCTGCCAGCTCCACAGATCAACCCACGCTCGC
CGAAGTTCACCTGTGCCTGCCCGGATGGCATGCTGTTGGCCAAGGACATGAGGAGCTGTCTCAC
AGAGACTGAACCTGCAGGAACCACCCAGGGACCTTCCATGGTCAACTCGACAGCTGTGGGGCCA
AAGCACACCGCCAGCTCTGAGCTCACCACAGCCGAGTCAGTGACGATGTCCCAACATGCCCTGG
GCGACGTTGCTGGCCGAGGAGTCACTGAGAAGCCCCAGAGCGTGGGTGCTCTGTACATTGTCCT
CCCCATTGCACTGCTCATCCTCCTCTTCTTCGGAACCTTCCTCCTCTGGAAGAACTGGAGGCTT
AAGAGCATCAACAGCATTAACTTCGACAACCCTGTGTACCAGAAGACCACGGAAGACGAGGTCC
ACATCTGCCGCAGCCAGGACGGCTACACCTACCCCTCGAGACAGATGGTCAGCCTGGAAGATGA
CGTGGCGTGAGCTGCTGCCTTGAGCCCTGTCCCACCTCAGAAGCTGCTGCTGGCCACTCACCGG
CAGGAAGAACACTTTCTCCTTGGACCCCTGAACTGCCCAAAACCCTTCCTGAGACTGAGGCGCC
AAAAGCACTGTTGGTGGTTACAGCCCTGGTGCCATCTGCTTGTCTGTCAGAGTTTTGTTTTATA
TATTTATTGTCTGGGAGGCAGAACAGGCTTCTGATGGCGCCTGGGCTGGGAATGGGTTAGGGTG
GCTTTTTTTCTTCCTTTCTTTCTTGACATGTGAAGAAGAGGAGCAAGGTGGATGAGCTGGGACG
CCTGAGCTTTTCTCCCCCTTGACATGCACCGCCTGAGAGACTTAGGGACTGATGGATGGAGGGA
TACAGAAGGAGAGGGTTAGGGGCTCTGAACACAGCAGGGCAGGTGATGCCCACAGGGTCCCCGG
GGAGTTCCCGAGCCCCACACTCAGGACTGAATGTGTTTACCTCTGCCTGGTGAACCTGCTGGGG
CGGCCAGAGTTGGCTTTTGCTCTGCTACCCCCAGGTCAGGATCAGATGAGGGTTTCCAAGCTGG
GTTTGCCCTCTCCATAAGCCAGGGAGGGGCCTCTGGCAATGGCTGAATCTAGCCTTCTTGGGGG
CTGCACCCACTGAGACCCATTCATTCACCAAAACCCCAGCCACAACCCCAGGGAAAGCTCAAGC
CGCTCGTCGCTCTTAATATGTATTAAGTGCCTGAGACCCCGTTACCTTGTGCGTCAAGACAAGC
AGCTCCGACCTCTAACTGTGTCCTTCCATCCGGGTGTGGGTGTCTGGACCCCAGCCCCGCCTCT
TGCACTTTTCAGTTCAGGGTTATACACTGTGTAAAGTCCACATTCTATTATTTTGCACTGCTTT
CCGTTCTGGTTGGGACGGGCTCCTAGGCCAGAGAGGCTCCGGGCGGATGACGGTGCAGACCCAG
CCTCTCTCCGAGGGCATAATGAGAGGTGCATGCAGAGGAAAGGGGCAGCTTGACCATGATTTCA
AAGTCAAGATCTCAACTATGTATCCCCCAAACATTTCCACTTCTGTGCCCCTGAGCCATCCACT
TCCCCGACAAGCTGGTCCATGATGAAATGTGCTTGTTGGTCCGCCCTGTAAGACTTGCTCTAGG
CTCAGGCATTTGAGGGGACCTATTAAAGAAGAATGCTTCCTGAAATTGCCACACATGTCGTGGC
ATTTAGAACCCCTGTGCTGGGGGACGGCCTCTAAGGGGGTTAACTTTCATTGCACAACGGAGGA
ACGTGGTGCCCCACTCTGCAGGAGACTGTGAATGCCTTTTCTCTTTCTGAAGCATGTAAATAAC
CCCCATGCAGACAGTGGGGGCTTTTTGTTATGTTTGCACTTTGTATATTTGTTGAAACACTTAC
TTGCCTATATATATGAAAAAGATCTATTTATTTTTGCAAACCCTGGTTGCTGCATTGGGGGGAA
CTGTCTCTGAGACGCCTTATCTTTCTGTACAAAGATTATTCGCGTGCTGTGCGCAATGCTCTTC
AGGAGAATCAGGTCTGGGTTGTATATATGGGTTGCTTTGTGGGGAGGGTATTGGGTTTTAAACC
ACTGTATAAAGAATGTTTTTATAGCCTACACGTCTTACTGTGATCAGTTAAATTTCTTAAATAA
AGTATTTGGTTAAATGTGAA

hide sequence

RefSeq Acc Id:

XM_021080449 ⟹ XP_020936108

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	69,836,637 - 69,864,823 (+)	NCBI

Sequence:

show sequence

TGTCTTCTGTTCTTTTTGGTGGGGTGGGGCTTGCCTGTGGCATATAGAAGTTCTTGGGCCAGGG
ATCAAACCCAGGCCACAGTTGCAACCCAAGGTGCTACAGTGCTAATGCAAGATCCTTGACCTGC
TGTGCCATAGGGGAAATTCCAAGATGTACTGTCTTCTGGAAGGTTCTGCATTCTGTACTGTAAG
GTTCTCCCAGGAATGGAAGATATGGACATGTACTTTCTGCCTCATTCATGAAGCTTTCATTCAT
TGCCCTTGTGCAAGAAGAGCTGATGGCGAAATTTTGCACAAACCATTAAACTACTTTTTGGTGG
AAGAGAAATGTGGGAGAAACGAGTTCCAGTGCCGAGACGGGAAATGCATCTCCTACAAGTGGAT
TTGTGATGGGAACACCGAGTGCAAGGACGGGTCCGATGAGTCCCTGGAGACGTGCATGTCTGTC
ACCTGCAAGATAGGGGACTTTAGCTGTGGGGGCCGTGTCAACCGCTGCATTCCTGAGTCTTGGA
GGTGTGACGGTCAGCAGGACTGCGAGAATGGCTCAGATGAGGAAGGCTGTTCCCCCAAGACGTG
CTCCCAAGATGAGTTCCGCTGCCAGGACGGCAAGTGCATCGCCCCAAAGTTTGTCTGTGACTCG
GACCGGGACTGCCTGGACGGCTCGGATGAAGCATCCTGCCCCACACCCACCTGTGGCCCCGCCA
GCTTCCAGTGCAACAGCTCCACCTGCATCCCTGAGCTGTGGGCCTGTGATGGTGATCCTGACTG
CGAGGACGGCTCAGACGAGTGGCCACAGCACTGCAGGAGCCACAGCTCATCACTCCCCGAGAGG
AGCAACAACCCCTGCTCAGCCCTCGAGTTCCACTGCCACAGTGGCGAGTGCATCCACTCCAGCT
GGCGCTGCGACGGAGACACTGACTGCAAGGACAAGTCTGACGAGGAGAACTGCGATGTGGCCAC
GTGCCGGCCTGACGAGTTCCAGTGCTCAGACGGGACCTGCATCCATGGTAGCCGGCAGTGCGAC
AGGGAATATGACTGCAAGGACCTGAGCGACGAGCAGGGCTGTGTCAATGTGACTCTGTGCGAGG
GGCCCAACAAGTTCAAGTGTCAAAGCGGCGAGTGCATCTCCTTGGACAAAGTGTGCAACTCAGT
CAGGGACTGCCGGGACTGGTCAGACGAGCCCCTCAAGGAGTGTGGGACCAACGAGTGTCTGGAC
AACAAGGGTGGCTGCTCCCATATCTGCAATGACCTCAAGATCGGCTATGAGTGCCTCTGTCCCG
AGGGCTTCCAGCTGGTGGATAAGCACAGATGCGAAGATATCGACGAGTGTCAGGACCCAGACGC
CTGCAGCCAGATCTGCGTGAACCTCGAGGGCAGCTACAAGTGCCAGTGTGAGGAGGGCTTCCAG
CTGGAGCCTCTCACCAAGGCCTGCAAGGCCATAGGCACCATCGCCTACCTCTTCTTCACCAACC
GCCACGAGGTGAGGAAGATGACCCTGGACCGTAGTGAGTACACCAGCCTCATCCCCAACCTGAA
GAACGTGGTCGCTCTGGACACTGAGGTGGCCAGCAACAGAATCTACTGGTCTGATCTGTCTCAG
AGGAAGATCTACAGTACCCAGATCAACAGGGCCCCCAGCTTTTCCTCCTATGACACCATTATTG
GCGAAGATCTCCAGGCCCCCGATGGGCTGGCGGTGGACTGGATCCACAGCAACATATACTGGAC
TGACTCCATCCTGGGCACTGTCTCCGTGGCTGACACCAAGGGCGTGAAGAGGAAGACTCTCTTC
CAAGAGAAAGGCTCCAAGCCACGGGCCATTGTGGTGGACCCTGTCCATGGCTTCATGTACTGGA
CTGATTGGGGAACCCCCGCCAAGATCAAGAAGGGCGGCCTGAACGGAGTGGACGTCTACTCGCT
GGTGACGGAGGACATCCAGTGGCCCAATGGCATCACCCTGGATCTTTCTGGCGGCCGCCTTTAC
TGGGTCGACTCCAAGCTCCACTCCATCTCCAGCATCGATGTCAACGGGGGGAACCGGAAGACCG
TCCTGGAGGACAAGACGAAGCTGGCGCACCCCTTCTCCTTGGCCATTTTTGAGGATAAAGTATT
TTGGACAGATGTAATCAACGAAGCCATTTTCAGTGCCAACCGCCTCACAGGCTCGGACATACAT
TTGATGGCAGAAAACCTGTTGTCTCCAGAGGACATTGTCCTTTTCCACAACCTCACACAGCCGA
GAGGGGTGAACTGGTGTGAAAGGACCGCCCTCCAAAACGGTGGCTGCCAGTACCTGTGTCTGCC
AGCTCCACAGATCAACCCACGCTCGCCGAAGTTCACCTGTGCCTGCCCGGATGGCATGCTGTTG
GCCAAGGACATGAGGAGCTGTCTCACAGAGACTGAACCTGCAGGAACCACCCAGGGACCTTCCA
TGGTCAACTCGACAGCTGTGGGGCCAAAGCACACCGCCAGCTCTGAGCTCACCACAGCCGAGTC
AGTGACGATGTCCCAACATGCCCTGGGCGACGTTGCTGGCCGAGGAGTCACTGAGAAGCCCCAG
AGCGTGGGTGCTCTGTACATTGTCCTCCCCATTGCACTGCTCATCCTCCTCTTCTTCGGAACCT
TCCTCCTCTGGAAGAACTGGAGGCTTAAGAGCATCAACAGCATTAACTTCGACAACCCTGTGTA
CCAGAAGACCACGGAAGACGAGGTCCACATCTGCCGCAGCCAGGACGGCTACACCTACCCCTCG
AGACAGATGGTCAGCCTGGAAGATGACGTGGCGTGAGCTGCTGCCTTGAGCCCTGTCCCACCTC
AGAAGCTGCTGCTGGCCACTCACCGGCAGGAAGAACACTTTCTCCTTGGACCCCTGAACTGCCC
AAAACCCTTCCTGAGACTGAGGCGCCAAAAGCACTGTTGGTGGTTACAGCCCTGGTGCCATCTG
CTTGTCTGTCAGAGTTTTGTTTTATATATTTATTGTCTGGGAGGCAGAACAGGCTTCTGATGGC
GCCTGGGCTGGGAATGGGTTAGGGTGGCTTTTTTTCTTCCTTTCTTTCTTGACATGTGAAGAAG
AGGAGCAAGGTGGATGAGCTGGGACGCCTGAGCTTTTCTCCCCCTTGACATGCACCGCCTGAGA
GACTTAGGGACTGATGGATGGAGGGATACAGAAGGAGAGGGTTAGGGGCTCTGAACACAGCAGG
GCAGGTGATGCCCACAGGGTCCCCGGGGAGTTCCCGAGCCCCACACTCAGGACTGAATGTGTTT
ACCTCTGCCTGGTGAACCTGCTGGGGCGGCCAGAGTTGGCTTTTGCTCTGCTACCCCCAGGTCA
GGATCAGATGAGGGTTTCCAAGCTGGGTTTGCCCTCTCCATAAGCCAGGGAGGGGCCTCTGGCA
ATGGCTGAATCTAGCCTTCTTGGGGGCTGCACCCACTGAGACCCATTCATTCACCAAAACCCCA
GCCACAACCCCAGGGAAAGCTCAAGCCGCTCGTCGCTCTTAATATGTATTAAGTGCCTGAGACC
CCGTTACCTTGTGCGTCAAGACAAGCAGCTCCGACCTCTAACTGTGTCCTTCCATCCGGGTGTG
GGTGTCTGGACCCCAGCCCCGCCTCTTGCACTTTTCAGTTCAGGGTTATACACTGTGTAAAGTC
CACATTCTATTATTTTGCACTGCTTTCCGTTCTGGTTGGGACGGGCTCCTAGGCCAGAGAGGCT
CCGGGCGGATGACGGTGCAGACCCAGCCTCTCTCCGAGGGCATAATGAGAGGTGCATGCAGAGG
AAAGGGGCAGCTTGACCATGATTTCAAAGTCAAGATCTCAACTATGTATCCCCCAAACATTTCC
ACTTCTGTGCCCCTGAGCCATCCACTTCCCCGACAAGCTGGTCCATGATGAAATGTGCTTGTTG
GTCCGCCCTGTAAGACTTGCTCTAGGCTCAGGCATTTGAGGGGACCTATTAAAGAAGAATGCTT
CCTGAAATTGCCACACATGTCGTGGCATTTAGAACCCCTGTGCTGGGGGACGGCCTCTAAGGGG
GTTAACTTTCATTGCACAACGGAGGAACGTGGTGCCCCACTCTGCAGGAGACTGTGAATGCCTT
TTCTCTTTCTGAAGCATGTAAATAACCCCCATGCAGACAGTGGGGGCTTTTTGTTATGTTTGCA
CTTTGTATATTTGTTGAAACACTTACTTGCCTATATATATGAAAAAGATCTATTTATTTTTGCA
AACCCTGGTTGCTGCATTGGGGGGAACTGTCTCTGAGACGCCTTATCTTTCTGTACAAAGATTA
TTCGCGTGCTGTGCGCAATGCTCTTCAGGAGAATCAGGTCTGGGTTGTATATATGGGTTGCTTT
GTGGGGAGGGTATTGGGTTTTAAACCACTGTATAAAGAATGTTTTTATAGCCTACACGTCTTAC
TGTGATCAGTTAAATTTCTTAAATAAAGTATTTGGTTAAATGTGAA

hide sequence

RefSeq Acc Id:

XM_021080452 ⟹ XP_020936111

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	69,828,348 - 69,864,823 (+)	NCBI

Sequence:

show sequence

AAGATATTTGAAAATCACCCCATGCAAACTCCTCCCTCTACGAGAAACCTCACATTGAAATGCT
GCAAATGACTGGGGCCCCGCGTGCAGTCGCGTCCGGGCCGCGCGAAGCCCGGATTTCAAGAGCG
CACACAGTGAACAGGAGCCCGGGCCAGGGAGCTGCAGGCGGAGGCTGGAAGCATGAAGTCCACG
GGCTGGGTCCTGCGATGGGCTGTCGCCTTGCTCATTGCTGCGGTGGCAGCTGCAGTGGAAGAGA
AATGTGGGAGAAACGAGTTCCAGTGCCGAGACGGGAAATGCATCTCCTACAAGTGGATTTGTGA
TGGGAACACCGAGTGCAAGGACGGGTCCGATGAGTCCCTGGAGACGTGCATGTCTGTCACCTGC
AAGATAGGGGACTTTAGCTGTGGGGGCCGTGTCAACCGCTGCATTCCTGAGTCTTGGAGGTGTG
ACGGTCAGCAGGACTGCGAGAATGGCTCAGATGAGGAAGGCTGTTCCCCCAAGACGTGCTCCCA
AGATGAGTTCCGCTGCCAGGACGGCAAGTGCATCGCCCCAAAGTTTGTCTGTGACTCGGACCGG
GACTGCCTGGACGGCTCGGATGAAGCATCCTGCCCCACACCCACCTGTGGCCCCGCCAGCTTCC
AGTGCAACAGCTCCACCTGCATCCCTGAGCTGTGGGCCTGTGATGGTGATCCTGACTGCGAGGA
CGGCTCAGACGAGTGGCCACAGCACTGCAGGAGCCACAGCTCATCACTCCCCGAGAGGAGCAAC
AACCCCTGCTCAGCCCTCGAGTTCCACTGCCACAGTGGCGAGTGCATCCACTCCAGCTGGCGCT
GCGACGGAGACACTGACTGCAAGGACAAGTCTGACGAGGAGAACTGCGATGTGGCCACGTGCCG
GCCTGACGAGTTCCAGTGCTCAGACGGGACCTGCATCCATGGTAGCCGGCAGTGCGACAGGGAA
TATGACTGCAAGGACCTGAGCGACGAGCAGGGCTGTGTCAATGTGACTCTGTGCGAGGGGCCCA
ACAAGTTCAAGTGTCAAAGCGGCGAGTGCATCTCCTTGGACAAAGTGTGCAACTCAGTCAGGGA
CTGCCGGGACTGGTCAGACGAGCCCCTCAAGGAGTGTGGGACCAACGAGTGTCTGGACAACAAG
GGTGGCTGCTCCCATATCTGCAATGACCTCAAGATCGGCTATGAGTGCCTCTGTCCCGAGGGCT
TCCAGCTGGTGGATAAGCACAGATGCGAAGATATCGACGAGTGTCAGGACCCAGACGCCTGCAG
CCAGATCTGCGTGAACCTCGAGGGCAGCTACAAGTGCCAGTGTGAGGAGGGCTTCCAGCTGGAG
CCTCTCACCAAGGCCTGCAAGGCCATAGGCACCATCGCCTACCTCTTCTTCACCAACCGCCACG
AGGTGAGGAAGATGACCCTGGACCGTAGTGAGTACACCAGCCTCATCCCCAACCTGAAGAACGT
GGTCGCTCTGGACACTGAGGTGGCCAGCAACAGAATCTACTGGTCTGATCTGTCTCAGAGGAAG
ATCTACAGTACCCAGATCAACAGGGCCCCCAGCTTTTCCTCCTATGACACCATTATTGGCGAAG
ATCTCCAGGCCCCCGATGGGCTGGCGGTGGACTGGATCCACAGCAACATATACTGGACTGACTC
CATCCTGGGCACTGTCTCCGTGGCTGACACCAAGGGCGTGAAGAGGAAGACTCTCTTCCAAGAG
AAAGGCTCCAAGCCACGGGCCATTGTGGTGGACCCTGTCCATGGCTTCATGTACTGGACTGATT
GGGGAACCCCCGCCAAGATCAAGAAGGGCGGCCTGAACGGAGTGGACGTCTACTCGCTGGTGAC
GGAGGACATCCAGTGGCCCAATGGCATCACCCTGGATCTTTCTGGCGGCCGCCTTTACTGGGTC
GACTCCAAGCTCCACTCCATCTCCAGCATCGATGTCAACGGGGGGAACCGGAAGACCGTCCTGG
AGGACAAGACGAAGCTGGCGCACCCCTTCTCCTTGGCCATTTTTGAGGATAAAGTATTTTGGAC
AGATGTAATCAACGAAGCCATTTTCAGTGCCAACCGCCTCACAGGCTCGGACATACATTTGATG
GCAGAAAACCTGTTGTCTCCAGAGGACATTGTCCTTTTCCACAACCTCACACAGCCGAGAGGTA
AAGATGGGGTGGTCACCCCCACTGCCAGTGCCCTGGAATTTTCTAGAAATTTTCTGATCTCGTT
CTTGCCCTGTCTCCCTGCCTTTTCCACCTCAGGGGTGAACTGGTGTGAAAGGACCGCCCTCCAA
AACGGTGGCTGCCAGTACCTGTGTCTGCCAGCTCCACAGATCAACCCACGCTCGCCGAAGTTCA
CCTGTGCCTGCCCGGATGGCATGCTGTTGGCCAAGGACATGAGGAGCTGTCTCACAGAGACTGA
ACCTGCAGGAACCACCCAGGGACCTTCCATGGTCAACTCGACAGCTGTGGGGCCAAAGCACACC
GCCAGCTCTGAGCTCACCACAGCCGAGTCAGTGACGATGTCCCAACATGCCCTGGGCGACGTTG
CTGGCCGAGGAGTCACTGAGAAGCCCCAGAGCGTGGGTGCTCTGTACATTGTCCTCCCCATTGC
ACTGCTCATCCTCCTCTTCTTCGGAACCTTCCTCCTCTGGAAGAACTGGAGGCTTAAGAGCATC
AACAGCATTAACTTCGACAACCCTGTGTACCAGAAGACCACGGAAGACGAGGTCCACATCTGCC
GCAGCCAGGACGGCTACACCTACCCCTCGAGACAGATGGTCAGCCTGGAAGATGACGTGGCGTG
AGCTGCTGCCTTGAGCCCTGTCCCACCTCAGAAGCTGCTGCTGGCCACTCACCGGCAGGAAGAA
CACTTTCTCCTTGGACCCCTGAACTGCCCAAAACCCTTCCTGAGACTGAGGCGCCAAAAGCACT
GTTGGTGGTTACAGCCCTGGTGCCATCTGCTTGTCTGTCAGAGTTTTGTTTTATATATTTATTG
TCTGGGAGGCAGAACAGGCTTCTGATGGCGCCTGGGCTGGGAATGGGTTAGGGTGGCTTTTTTT
CTTCCTTTCTTTCTTGACATGTGAAGAAGAGGAGCAAGGTGGATGAGCTGGGACGCCTGAGCTT
TTCTCCCCCTTGACATGCACCGCCTGAGAGACTTAGGGACTGATGGATGGAGGGATACAGAAGG
AGAGGGTTAGGGGCTCTGAACACAGCAGGGCAGGTGATGCCCACAGGGTCCCCGGGGAGTTCCC
GAGCCCCACACTCAGGACTGAATGTGTTTACCTCTGCCTGGTGAACCTGCTGGGGCGGCCAGAG
TTGGCTTTTGCTCTGCTACCCCCAGGTCAGGATCAGATGAGGGTTTCCAAGCTGGGTTTGCCCT
CTCCATAAGCCAGGGAGGGGCCTCTGGCAATGGCTGAATCTAGCCTTCTTGGGGGCTGCACCCA
CTGAGACCCATTCATTCACCAAAACCCCAGCCACAACCCCAGGGAAAGCTCAAGCCGCTCGTCG
CTCTTAATATGTATTAAGTGCCTGAGACCCCGTTACCTTGTGCGTCAAGACAAGCAGCTCCGAC
CTCTAACTGTGTCCTTCCATCCGGGTGTGGGTGTCTGGACCCCAGCCCCGCCTCTTGCACTTTT
CAGTTCAGGGTTATACACTGTGTAAAGTCCACATTCTATTATTTTGCACTGCTTTCCGTTCTGG
TTGGGACGGGCTCCTAGGCCAGAGAGGCTCCGGGCGGATGACGGTGCAGACCCAGCCTCTCTCC
GAGGGCATAATGAGAGGTGCATGCAGAGGAAAGGGGCAGCTTGACCATGATTTCAAAGTCAAGA
TCTCAACTATGTATCCCCCAAACATTTCCACTTCTGTGCCCCTGAGCCATCCACTTCCCCGACA
AGCTGGTCCATGATGAAATGTGCTTGTTGGTCCGCCCTGTAAGACTTGCTCTAGGCTCAGGCAT
TTGAGGGGACCTATTAAAGAAGAATGCTTCCTGAAATTGCCACACATGTCGTGGCATTTAGAAC
CCCTGTGCTGGGGGACGGCCTCTAAGGGGGTTAACTTTCATTGCACAACGGAGGAACGTGGTGC
CCCACTCTGCAGGAGACTGTGAATGCCTTTTCTCTTTCTGAAGCATGTAAATAACCCCCATGCA
GACAGTGGGGGCTTTTTGTTATGTTTGCACTTTGTATATTTGTTGAAACACTTACTTGCCTATA
TATATGAAAAAGATCTATTTATTTTTGCAAACCCTGGTTGCTGCATTGGGGGGAACTGTCTCTG
AGACGCCTTATCTTTCTGTACAAAGATTATTCGCGTGCTGTGCGCAATGCTCTTCAGGAGAATC
AGGTCTGGGTTGTATATATGGGTTGCTTTGTGGGGAGGGTATTGGGTTTTAAACCACTGTATAA
AGAATGTTTTTATAGCCTACACGTCTTACTGTGATCAGTTAAATTTCTTAAATAAAGTATTTGG
TTAAATGTGAA

hide sequence

RefSeq Acc Id:

XM_021080457 ⟹ XP_020936116

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	69,835,066 - 69,864,823 (+)	NCBI

Sequence:

show sequence

GTTCCCAGGCTAGGGGTCAAATCAGATCTGTAGCTGCTGGCCTACACCACAGCCACAGCAAGGC
CAGATCCGAGCAGGGTCTGCGACCTACACCACAGCTCACAGCAACCCCGGATCCTTAACCCACT
GAGCAAGGACAGGGATGGAGCCTACGTCCTCATGGATGCTCGTGAAATTCGTGAACCACTGAGC
CACGGTGGGAACTTCCGCTTGTATTTTTTGTAAGATTCCAAATATAAGTAATACTAGGTTATTT
TTCTTTCTCTGTCTGGCTTACTTAGTATATAATCCCTAGATCCATCCTTGTTGCTGCAAATGGC
ATTGTTTCATTCTTTTTTATGGCCAAGTACCAAGGGCAAGGTTAATTGCCACAGGAAGCCACAT
TTCAAAGAGCGACCTTGATCATTTTGATTTTTTTTTTTGTTCTTTTTTTCTTTACTCAACCTTC
CATCATATCTGATGAGGTCTGTTTTTATCTTGTACGTTGAGGGTGGGAGGGGCAAAATGCTCAT
TTCTCGGAATAAACTTGTTAACGTTGCCATCTAAGTGTGTGCCCTGAAGTTTGCACATTTATAT
CTACTTGCAGCTCATTAGCAGTAATACAGAGAAGAAGGAGGAGAATAGATCCTTCAAAAGAGTC
TTTAGTAGTCTCAAGGCTAAAGAATTACTATGAATGGAGGATTTCCCTGGTGGCTCTGTTGGTT
AAGGCAACAGTGTCACTGCTGTAGCTCTGGTTACTGCTGTGGCTTGGGTTCATTCCCTGGCCCG
GAAACTTCTACATGCTATGTATGTGGTTAAAAAAAAATTATGTAATGGAAATTCTTTTTTTTTT
TTTTTTTCCCAACAAAAATTTTAATTTGGGAGTTTTTGTTCCGTCAGGACAAACTGACATTGTC
TCCGTGAGAATGTGGGTTGGATCCCTGGCCTGGCTCAGTGATTTAAGGATTTGGCATTGCCCTG
GCTATGGCATAGCCTGAAGCTGTGGCTCCAGTTTGACTCCTAGACTGGGAAATTCCCTATGTGG
CAGTGGAAGAGAAATGTGGGAGAAACGAGTTCCAGTGCCGAGACGGGAAATGCATCTCCTACAA
GTGGATTTGTGATGGGAACACCGAGTGCAAGGACGGGTCCGATGAGTCCCTGGAGACGTGCATG
TCTGTCACCTGCAAGATAGGGGACTTTAGCTGTGGGGGCCGTGTCAACCGCTGCATTCCTGAGT
CTTGGAGGTGTGACGGTCAGCAGGACTGCGAGAATGGCTCAGATGAGGAAGGCTGTTCCCCCAA
GACGTGCTCCCAAGATGAGTTCCGCTGCCAGGACGGCAAGTGCATCGCCCCAAAGTTTGTCTGT
GACTCGGACCGGGACTGCCTGGACGGCTCGGATGAAGCATCCTGCCCCACACCCACCTGTGGCC
CCGCCAGCTTCCAGTGCAACAGCTCCACCTGCATCCCTGAGCTGTGGGCCTGTGATGGTGATCC
TGACTGCGAGGACGGCTCAGACGAGTGGCCACAGCACTGCAGGAGCCACAGCTCATCACTCCCC
GAGAGGAGCAACAACCCCTGCTCAGCCCTCGAGTTCCACTGCCACAGTGGCGAGTGCATCCACT
CCAGCTGGCGCTGCGACGGAGACACTGACTGCAAGGACAAGTCTGACGAGGAGAACTGCGATGT
GGCCACGTGCCGGCCTGACGAGTTCCAGTGCTCAGACGGGACCTGCATCCATGGTAGCCGGCAG
TGCGACAGGGAATATGACTGCAAGGACCTGAGCGACGAGCAGGGCTGTGTCAATGTGACTCTGT
GCGAGGGGCCCAACAAGTTCAAGTGTCAAAGCGGCGAGTGCATCTCCTTGGACAAAGTGTGCAA
CTCAGTCAGGGACTGCCGGGACTGGTCAGACGAGCCCCTCAAGGAGTGTGGGACCAACGAGTGT
CTGGACAACAAGGGTGGCTGCTCCCATATCTGCAATGACCTCAAGATCGGCTATGAGTGCCTCT
GTCCCGAGGGCTTCCAGCTGGTGGATAAGCACAGATGCGAAGATATCGACGAGTGTCAGGACCC
AGACGCCTGCAGCCAGATCTGCGTGAACCTCGAGGGCAGCTACAAGTGCCAGTGTGAGGAGGGC
TTCCAGCTGGAGCCTCTCACCAAGGCCTGCAAGGCCATAGGCACCATCGCCTACCTCTTCTTCA
CCAACCGCCACGAGGTGAGGAAGATGACCCTGGACCGTAGTGAGTACACCAGCCTCATCCCCAA
CCTGAAGAACGTGGTCGCTCTGGACACTGAGGTGGCCAGCAACAGAATCTACTGGTCTGATCTG
TCTCAGAGGAAGATCTACAGTACCCAGATCAACAGGGCCCCCAGCTTTTCCTCCTATGACACCA
TTATTGGCGAAGATCTCCAGGCCCCCGATGGGCTGGCGGTGGACTGGATCCACAGCAACATATA
CTGGACTGACTCCATCCTGGGCACTGTCTCCGTGGCTGACACCAAGGGCGTGAAGAGGAAGACT
CTCTTCCAAGAGAAAGGCTCCAAGCCACGGGCCATTGTGGTGGACCCTGTCCATGGCTTCATGT
ACTGGACTGATTGGGGAACCCCCGCCAAGATCAAGAAGGGCGGCCTGAACGGAGTGGACGTCTA
CTCGCTGGTGACGGAGGACATCCAGTGGCCCAATGGCATCACCCTGGATCTTTCTGGCGGCCGC
CTTTACTGGGTCGACTCCAAGCTCCACTCCATCTCCAGCATCGATGTCAACGGGGGGAACCGGA
AGACCGTCCTGGAGGACAAGACGAAGCTGGCGCACCCCTTCTCCTTGGCCATTTTTGAGGATAA
AGTATTTTGGACAGATGTAATCAACGAAGCCATTTTCAGTGCCAACCGCCTCACAGGCTCGGAC
ATACATTTGATGGCAGAAAACCTGTTGTCTCCAGAGGACATTGTCCTTTTCCACAACCTCACAC
AGCCGAGAGGGGTGAACTGGTGTGAAAGGACCGCCCTCCAAAACGGTGGCTGCCAGTACCTGTG
TCTGCCAGCTCCACAGATCAACCCACGCTCGCCGAAGTTCACCTGTGCCTGCCCGGATGGCATG
CTGTTGGCCAAGGACATGAGGAGCTGTCTCACAGAGACTGAACCTGCAGGAACCACCCAGGGAC
CTTCCATGGTCAACTCGACAGCTGTGGGGCCAAAGCACACCGCCAGCTCTGAGCTCACCACAGC
CGAGTCAGTGACGATGTCCCAACATGCCCTGGGCGACGTTGCTGGCCGAGGAGTCACTGAGAAG
CCCCAGAGCGTGGGTGCTCTGTACATTGTCCTCCCCATTGCACTGCTCATCCTCCTCTTCTTCG
GAACCTTCCTCCTCTGGAAGAACTGGAGGCTTAAGAGCATCAACAGCATTAACTTCGACAACCC
TGTGTACCAGAAGACCACGGAAGACGAGGTCCACATCTGCCGCAGCCAGGACGGCTACACCTAC
CCCTCGAGACAGATGGTCAGCCTGGAAGATGACGTGGCGTGAGCTGCTGCCTTGAGCCCTGTCC
CACCTCAGAAGCTGCTGCTGGCCACTCACCGGCAGGAAGAACACTTTCTCCTTGGACCCCTGAA
CTGCCCAAAACCCTTCCTGAGACTGAGGCGCCAAAAGCACTGTTGGTGGTTACAGCCCTGGTGC
CATCTGCTTGTCTGTCAGAGTTTTGTTTTATATATTTATTGTCTGGGAGGCAGAACAGGCTTCT
GATGGCGCCTGGGCTGGGAATGGGTTAGGGTGGCTTTTTTTCTTCCTTTCTTTCTTGACATGTG
AAGAAGAGGAGCAAGGTGGATGAGCTGGGACGCCTGAGCTTTTCTCCCCCTTGACATGCACCGC
CTGAGAGACTTAGGGACTGATGGATGGAGGGATACAGAAGGAGAGGGTTAGGGGCTCTGAACAC
AGCAGGGCAGGTGATGCCCACAGGGTCCCCGGGGAGTTCCCGAGCCCCACACTCAGGACTGAAT
GTGTTTACCTCTGCCTGGTGAACCTGCTGGGGCGGCCAGAGTTGGCTTTTGCTCTGCTACCCCC
AGGTCAGGATCAGATGAGGGTTTCCAAGCTGGGTTTGCCCTCTCCATAAGCCAGGGAGGGGCCT
CTGGCAATGGCTGAATCTAGCCTTCTTGGGGGCTGCACCCACTGAGACCCATTCATTCACCAAA
ACCCCAGCCACAACCCCAGGGAAAGCTCAAGCCGCTCGTCGCTCTTAATATGTATTAAGTGCCT
GAGACCCCGTTACCTTGTGCGTCAAGACAAGCAGCTCCGACCTCTAACTGTGTCCTTCCATCCG
GGTGTGGGTGTCTGGACCCCAGCCCCGCCTCTTGCACTTTTCAGTTCAGGGTTATACACTGTGT
AAAGTCCACATTCTATTATTTTGCACTGCTTTCCGTTCTGGTTGGGACGGGCTCCTAGGCCAGA
GAGGCTCCGGGCGGATGACGGTGCAGACCCAGCCTCTCTCCGAGGGCATAATGAGAGGTGCATG
CAGAGGAAAGGGGCAGCTTGACCATGATTTCAAAGTCAAGATCTCAACTATGTATCCCCCAAAC
ATTTCCACTTCTGTGCCCCTGAGCCATCCACTTCCCCGACAAGCTGGTCCATGATGAAATGTGC
TTGTTGGTCCGCCCTGTAAGACTTGCTCTAGGCTCAGGCATTTGAGGGGACCTATTAAAGAAGA
ATGCTTCCTGAAATTGCCACACATGTCGTGGCATTTAGAACCCCTGTGCTGGGGGACGGCCTCT
AAGGGGGTTAACTTTCATTGCACAACGGAGGAACGTGGTGCCCCACTCTGCAGGAGACTGTGAA
TGCCTTTTCTCTTTCTGAAGCATGTAAATAACCCCCATGCAGACAGTGGGGGCTTTTTGTTATG
TTTGCACTTTGTATATTTGTTGAAACACTTACTTGCCTATATATATGAAAAAGATCTATTTATT
TTTGCAAACCCTGGTTGCTGCATTGGGGGGAACTGTCTCTGAGACGCCTTATCTTTCTGTACAA
AGATTATTCGCGTGCTGTGCGCAATGCTCTTCAGGAGAATCAGGTCTGGGTTGTATATATGGGT
TGCTTTGTGGGGAGGGTATTGGGTTTTAAACCACTGTATAAAGAATGTTTTTATAGCCTACACG
TCTTACTGTGATCAGTTAAATTTCTTAAATAAAGTATTTGGTTAAATGTGAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001193283	(Get FASTA)	NCBI Sequence Viewer
	XP_020936103	(Get FASTA)	NCBI Sequence Viewer
	XP_020936108	(Get FASTA)	NCBI Sequence Viewer
	XP_020936111	(Get FASTA)	NCBI Sequence Viewer
	XP_020936116	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAB27716	(Get FASTA)	NCBI Sequence Viewer
	AAC17444	(Get FASTA)	NCBI Sequence Viewer
	AAC39254	(Get FASTA)	NCBI Sequence Viewer
	AAD03485	(Get FASTA)	NCBI Sequence Viewer
	AAD13300	(Get FASTA)	NCBI Sequence Viewer
	AHF51842	(Get FASTA)	NCBI Sequence Viewer
	Q28832	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

XP_020936111 ⟸ XM_021080452

- Peptide Label:

isoform X3

- Sequence:

show sequence

MKSTGWVLRWAVALLIAAVAAAVEEKCGRNEFQCRDGKCISYKWICDGNTECKDGSDESLETCM
SVTCKIGDFSCGGRVNRCIPESWRCDGQQDCENGSDEEGCSPKTCSQDEFRCQDGKCIAPKFVC
DSDRDCLDGSDEASCPTPTCGPASFQCNSSTCIPELWACDGDPDCEDGSDEWPQHCRSHSSSLP
ERSNNPCSALEFHCHSGECIHSSWRCDGDTDCKDKSDEENCDVATCRPDEFQCSDGTCIHGSRQ
CDREYDCKDLSDEQGCVNVTLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKECGTNEC
LDNKGGCSHICNDLKIGYECLCPEGFQLVDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEG
FQLEPLTKACKAIGTIAYLFFTNRHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDL
SQRKIYSTQINRAPSFSSYDTIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKT
LFQEKGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGR
LYWVDSKLHSISSIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTDVINEAIFSANRLTGSD
IHLMAENLLSPEDIVLFHNLTQPRGKDGVVTPTASALEFSRNFLISFLPCLPAFSTSGVNWCER
TALQNGGCQYLCLPAPQINPRSPKFTCACPDGMLLAKDMRSCLTETEPAGTTQGPSMVNSTAVG
PKHTASSELTTAESVTMSQHALGDVAGRGVTEKPQSVGALYIVLPIALLILLFFGTFLLWKNWR
LKSINSINFDNPVYQKTTEDEVHICRSQDGYTYPSRQMVSLEDDVA

hide sequence

RefSeq Acc Id:	NP_001193283 ⟸ NM_001206354
- Peptide Label:	precursor
- UniProtKB:	Q28832 (UniProtKB/Swiss-Prot), W0G5E7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKSTGWVLRWAVALLIAAVAAAVEEKCGRNEFQCRDGKCISYKWICDGNTECKDGSDESLETCM SVTCKIGDFSCGGRVNRCIPESWRCDGQQDCENGSDEEGCSPKTCSQDEFRCQDGKCIAPKFVC DSDRDCLDGSDEASCPTPTCGPASFQCNSSTCIPELWACDGDPDCEDGSDEWPQHCRSHSSSLP ERSNNPCSALEFHCHSGECIHSSWRCDGDTDCKDKSDEENCDVATCRPDEFQCSDGTCIHGSRQ CDREYDCKDMSDEQGCVNATLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKECGTNEC LDNKGGCSHICNDLKIGYECLCPEGFQLVDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEG FQLEPLTKACKAIGTIAYLFFTNRHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDL SQRKIYSTQIDRAPSFSSYDTIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKT LFQEKGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGR LYWVDSKLHSISSIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTDIINEAIFSANRLTGSD IHLMAENLLSPEDIVLFHNLTQPRGVNWCERTALQNGGCQYLCLPAPQINPRSPKFTCACPDGM LLAKDMRSCLTETEPAGTTQGPSMVNSTAVGPKHTASSELTTAESVTMSQHALGDVAGRGVTEK PQSVGALYIVLPIALLILLFFGTFLLWKNWRLKSINSINFDNPVYQKTTEDEVHICRSQDGYTY PSRQMVSLEDDVA hide sequence

RefSeq Acc Id:

XP_020936116 ⟸ XM_021080457

- Peptide Label:

isoform X4

- Sequence:

show sequence

MSVTCKIGDFSCGGRVNRCIPESWRCDGQQDCENGSDEEGCSPKTCSQDEFRCQDGKCIAPKFV
CDSDRDCLDGSDEASCPTPTCGPASFQCNSSTCIPELWACDGDPDCEDGSDEWPQHCRSHSSSL
PERSNNPCSALEFHCHSGECIHSSWRCDGDTDCKDKSDEENCDVATCRPDEFQCSDGTCIHGSR
QCDREYDCKDLSDEQGCVNVTLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKECGTNE
CLDNKGGCSHICNDLKIGYECLCPEGFQLVDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEE
GFQLEPLTKACKAIGTIAYLFFTNRHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSD
LSQRKIYSTQINRAPSFSSYDTIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRK
TLFQEKGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGG
RLYWVDSKLHSISSIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTDVINEAIFSANRLTGS
DIHLMAENLLSPEDIVLFHNLTQPRGVNWCERTALQNGGCQYLCLPAPQINPRSPKFTCACPDG
MLLAKDMRSCLTETEPAGTTQGPSMVNSTAVGPKHTASSELTTAESVTMSQHALGDVAGRGVTE
KPQSVGALYIVLPIALLILLFFGTFLLWKNWRLKSINSINFDNPVYQKTTEDEVHICRSQDGYT
YPSRQMVSLEDDVA

hide sequence

RefSeq Acc Id:

XP_020936103 ⟸ XM_021080444

- Peptide Label:

isoform X1

- Sequence:

show sequence

MYCLLEGSAFCTVRFSQEWKIWTCTFCLIHEAFIHCPCARRADGEILHKPLNYFLVEEKCGRNE
FQCRDGKCISYKWICDGNTECKDGSDESLETCMSVTCKIGDFSCGGRVNRCIPESWRCDGQQDC
ENGSDEEGCSPKTCSQDEFRCQDGKCIAPKFVCDSDRDCLDGSDEASCPTPTCGPASFQCNSST
CIPELWACDGDPDCEDGSDEWPQHCRSHSSSLPERSNNPCSALEFHCHSGECIHSSWRCDGDTD
CKDKSDEENCDVATCRPDEFQCSDGTCIHGSRQCDREYDCKDLSDEQGCVNVTLCEGPNKFKCQ
SGECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLVDK
HRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEPLTKACKAIGTIAYLFFTNRHEVRKMT
LDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQINRAPSFSSYDTIIGEDLQAPD
GLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFQEKGSKPRAIVVDPVHGFMYWTDWGTPAK
IKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTVLEDKTKL
AHPFSLAIFEDKVFWTDVINEAIFSANRLTGSDIHLMAENLLSPEDIVLFHNLTQPRGKDGVVT
PTASALEFSRNFLISFLPCLPAFSTSGVNWCERTALQNGGCQYLCLPAPQINPRSPKFTCACPD
GMLLAKDMRSCLTETEPAGTTQGPSMVNSTAVGPKHTASSELTTAESVTMSQHALGDVAGRGVT
EKPQSVGALYIVLPIALLILLFFGTFLLWKNWRLKSINSINFDNPVYQKTTEDEVHICRSQDGY
TYPSRQMVSLEDDVA

hide sequence

RefSeq Acc Id:

XP_020936108 ⟸ XM_021080449

- Peptide Label:

isoform X2

- Sequence:

show sequence

MYCLLEGSAFCTVRFSQEWKIWTCTFCLIHEAFIHCPCARRADGEILHKPLNYFLVEEKCGRNE
FQCRDGKCISYKWICDGNTECKDGSDESLETCMSVTCKIGDFSCGGRVNRCIPESWRCDGQQDC
ENGSDEEGCSPKTCSQDEFRCQDGKCIAPKFVCDSDRDCLDGSDEASCPTPTCGPASFQCNSST
CIPELWACDGDPDCEDGSDEWPQHCRSHSSSLPERSNNPCSALEFHCHSGECIHSSWRCDGDTD
CKDKSDEENCDVATCRPDEFQCSDGTCIHGSRQCDREYDCKDLSDEQGCVNVTLCEGPNKFKCQ
SGECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLVDK
HRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEPLTKACKAIGTIAYLFFTNRHEVRKMT
LDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQINRAPSFSSYDTIIGEDLQAPD
GLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFQEKGSKPRAIVVDPVHGFMYWTDWGTPAK
IKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTVLEDKTKL
AHPFSLAIFEDKVFWTDVINEAIFSANRLTGSDIHLMAENLLSPEDIVLFHNLTQPRGVNWCER
TALQNGGCQYLCLPAPQINPRSPKFTCACPDGMLLAKDMRSCLTETEPAGTTQGPSMVNSTAVG
PKHTASSELTTAESVTMSQHALGDVAGRGVTEKPQSVGALYIVLPIALLILLFFGTFLLWKNWR
LKSINSINFDNPVYQKTTEDEVHICRSQDGYTYPSRQMVSLEDDVA

hide sequence

RefSeq Acc Id:

ENSSSCP00000071214 ⟸ ENSSSCT00000068362

RefSeq Acc Id:

ENSSSCP00000021308 ⟸ ENSSSCT00000029210

RefSeq Acc Id:

ENSSSCP00000070721 ⟸ ENSSSCT00000069615

RefSeq Acc Id:

ENSSSCP00000070219 ⟸ ENSSSCT00000070645

RefSeq Acc Id:

ENSSSCP00000059974 ⟸ ENSSSCT00000091324

RefSeq Acc Id:

ENSSSCP00000060758 ⟸ ENSSSCT00000081506

RefSeq Acc Id:

ENSSSCP00000030589 ⟸ ENSSSCT00000033970

Protein Domains

EGF-like EGF_CA LDL-receptor class A

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000028512	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00070024677	UniProtKB/TrEMBL
Ensembl Protein	ENSSSCP00000021308	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCP00000030589	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCP00000059974	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCP00000060758	UniProtKB/TrEMBL
	ENSSSCP00000070219	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCP00000070721	UniProtKB/TrEMBL
	ENSSSCP00000071214	UniProtKB/TrEMBL
	ENSSSCP00070041856	UniProtKB/TrEMBL
	ENSSSCP00070041860	UniProtKB/TrEMBL
	ENSSSCP00070041866	UniProtKB/TrEMBL
	ENSSSCP00070041872	UniProtKB/TrEMBL
	ENSSSCP00070041874	UniProtKB/TrEMBL
	ENSSSCP00070041875	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000029210	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCT00000033970	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCT00000068362	UniProtKB/TrEMBL
	ENSSSCT00000069615	UniProtKB/TrEMBL
	ENSSSCT00000070645	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCT00000081506	UniProtKB/TrEMBL
	ENSSSCT00000091324	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCT00070049559	UniProtKB/TrEMBL
	ENSSSCT00070049564	UniProtKB/TrEMBL
	ENSSSCT00070049575	UniProtKB/TrEMBL
	ENSSSCT00070049584	UniProtKB/TrEMBL
	ENSSSCT00070049586	UniProtKB/TrEMBL
	ENSSSCT00070049589	UniProtKB/TrEMBL
Gene3D-CATH	2.120.10.30	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	4.10.400.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	6-blade_b-propeller_TolB-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	EGF-like_Ca-bd_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	EGF-like_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	EGF-type_Asp/Asn_hydroxyl_site	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	EGF_Ca-bd_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Growth_fac_rcpt_cys_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	LDL_receptor-like_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	LDLR_class-A_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	LDLR_classB_rpt	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	LDrepeatLR_classA_rpt	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	ssc:396801	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene	LDLR	ENTREZGENE
Pfam	EGF_CA	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ldl_recept_a	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ldl_recept_b	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS	LDLRECEPTOR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	ASX_HYDROXYL	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	EGF_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	EGF_3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	EGF_CA	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	LDLRA_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	LDLRA_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	LDLRB	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	EGF	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	EGF_CA	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	LDLa	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SM00135	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF57184	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF57424	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A4X1VEW9_PIG	UniProtKB/TrEMBL
	A0A4X1VEX7_PIG	UniProtKB/TrEMBL
	A0A4X1VIY7_PIG	UniProtKB/TrEMBL
	A0A4X1VIZ9_PIG	UniProtKB/TrEMBL
	A0A4X1VK98_PIG	UniProtKB/TrEMBL
	A0A4X1VLQ0_PIG	UniProtKB/TrEMBL
	A0A5G2Q7C7_PIG	UniProtKB/TrEMBL
	A0A5G2QFD9_PIG	UniProtKB/TrEMBL
	A0A5G2R284_PIG	UniProtKB/TrEMBL
	A0A5G2RGB0_PIG	UniProtKB/TrEMBL
	A0A5G2RHC2_PIG	UniProtKB/TrEMBL
	I3LB89_PIG	UniProtKB/TrEMBL
	K7GRR0_PIG	UniProtKB/TrEMBL
	LDLR_PIG	UniProtKB/Swiss-Prot, ENTREZGENE
	W0G5E7	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	O62817	UniProtKB/Swiss-Prot
	O77619	UniProtKB/Swiss-Prot
	Q9TV95	UniProtKB/Swiss-Prot
VGNC ID	VGNC:89671	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIA

Imported Disease Annotations - OMIM

RGD Manual Annotations