TDH (L-threonine 3-dehydrogenase)

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Gene: TDH (L-threonine 3-dehydrogenase) Sus scrofa

Analyze

Symbol:

TDH

Name:

L-threonine 3-dehydrogenase

RGD ID:

13937475

Description:

ENCODES a protein that exhibits identical protein binding (ortholog); L-threonine 3-dehydrogenase activity (ortholog); INVOLVED IN threonine catabolic process (ortholog); FOUND IN mitochondrion (inferred)

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Also known as:

L-threonine 3-dehydrogenase, mitochondrial

RGD Orthologs

Human

Mouse

Rat

Dog

Alliance Genes

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	14	14,577,009 - 14,597,695 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

L-threonine catabolic process to glycine (IEA)

threonine catabolic process (IBA,ISO,ISS)

Cellular Component

mitochondrion (IEA)

Molecular Function

catalytic activity (IEA)

identical protein binding (ISO,ISS)

L-threonine 3-dehydrogenase activity (IBA,ISO,ISS)

References

Additional References at PubMed

PMID:12097150	PMID:14681463

Genomics

Comparative Map Data

TDH
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	14	14,577,009 - 14,597,695 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

TDH
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	8	11,339,637 - 11,368,452 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	8	11,339,637 - 11,368,452 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	8	11,197,146 - 11,225,961 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	11,234,556 - 11,263,371 (+)	NCBI	NCBI36		hg18	NCBI36
Celera	8	10,325,172 - 10,353,989 (+)	NCBI
Cytogenetic Map	8	p23.1	NCBI
HuRef	8	10,127,309 - 10,156,094 (+)	NCBI		HuRef
CHM1_1	8	11,262,440 - 11,291,368 (+)	NCBI		CHM1_1

Tdh
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	63,729,796 - 63,746,541 (-)	NCBI	GRCm39		mm39
GRCm38	14	63,492,347 - 63,509,092 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	63,492,347 - 63,509,092 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	64,111,184 - 64,127,929 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	14	62,446,457 - 62,463,202 (-)	NCBI			mm8
Celera	14	61,261,977 - 61,278,715 (-)	NCBI		Celera
Cytogenetic Map	14	D1	NCBI

Tdh
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	15	37,739,823 - 37,753,365 (-)	NCBI
Rnor_6.0 Ensembl	15	46,667,926 - 46,681,467 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	15	46,667,926 - 46,682,752 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	15	50,429,955 - 50,443,496 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	15	42,758,308 - 42,771,849 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	15	42,774,121 - 42,787,473 (-)	NCBI
Celera	15	37,422,646 - 37,436,207 (-)	NCBI		Celera
Cytogenetic Map	15	p12	NCBI

LOC477365
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	25	26,541,717 - 26,560,366 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	endocrine system	nervous system
High
Medium
Low		3	12
Below cutoff	1		7

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_214004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005658621	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021072090	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021072091	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021072092	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021072093	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK233173	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK236583	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK400666	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY095535	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

NM_214004 ⟹ NP_999169

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	14,585,838 - 14,595,322 (+)	NCBI

Sequence:

show sequence

ATGCCCGTTGTGAAGATGCTGAAGCAGGTTGCCAGCCGGACGCTGGGGAGCCCGGCCTGTGGCT
GCCAGCCACCCACCCTGCCCCGCCGGTTTCTGGGCACCTCCCCTCGGCAGATTCCAGCAGACGC
CAACTTCCACTCCACCTCCTTCTCTGAAGCAAACCAGCCACGTGTCTTAATTACAGGGGGCCTT
GGCCAGCTTGGAGTGGGGCTTGCTAGCCTTTTGAGGAAACGGTTTGGGAAGGACAACGTGATTC
TATCTGACATTCGGAAGCCCCCCGAGCACGTCTTCCTCAGTGGCCCCTTTATTTATTCCGACAT
CCTGGATTACAAGAACCTTCGGGAGATCGTGGTGAACAACCGCGTCACCTGGCTGTTTCATTAC
AGTGCCCTGCTCAGTGCGGTGGGCGAAGCAAATGTGTCCCTGGCCAGAGCCGTGAACATCACTG
GGTTGCACAATGTCCTGGATGTTGCCGCGGAACATGGTCTGCGACTGTTCGTGCCCAGCACCAT
CGGGGCTTTTGGACCCACTTCTCCTCGGAACCCAACTCCCGATCTCTGCATCCAGAGACCCAGG
ACCATCTACGGGGTGTCCAAGGTCCACGCAGAGCTCATGGGAGAGTATTATTATTACCGGTATG
GGTTAGACTTCCGATGCCTGAGATATCCTGGGATCATTTCTGCCGACTCCCAGCCCGGAGGAGG
AACGACTGACTACGCGGTGCAGATCTTCCAGGACGCCGTCAAGAACGGCAGATTTGAATGCAAC
CTGAACCCTGGCACGAAGCTCCCCATGATGTACATCGATGACTGCCTGCGGGCCACCCTGGAGG
TCATGGAGGCGCCGGCGGAGGCCCTCTCCCTGAGGACCTACAACGTCAATGCCATGAGCTTCAC
CCCCGCCGAGCTGGCCCAGGAGGTCCTCAAGCACATCCCGGAGTTCCAGATCACCTACAATGTG
GACTCTGTCCGGCAGGCCATAGCGGATAGTTGGCCAATGAACTTTGACGATAGCACCGCTCGGA
GGGACTGGGGGTGGAAACACGATTTTGACCTCCCGGAGCTGGTGACGACGATGTTGAACTTCCA
TGGTGCCCATAGCAGAGTCGCCCAAGCTAACTGA

hide sequence

RefSeq Acc Id:

XM_005658621 ⟹ XP_005658678

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	14,585,560 - 14,597,695 (+)	NCBI

Sequence:

show sequence

CTCTGGCCAGCCTTTGTTTGTCTGCACTTTGCACGAGCAGCGTTTCTCCCCATTCACTGGGCTG
GGCTCATAATCAGCTCTTGACTGGCTCCCTAGCGGCTGTTGGCAGAGACCATGCCCGTTGTGAA
GATGCTGAAGCAGGTTGCCAGCCGGACGCTGGGGAGCCCGGCCTGTGGCTGCCAGCCACCCACC
CTGCCCCGCCGGTTTCTGGGCACCTCCCCTCGGCAGATTCCAGCAGACGCCAACTTCCACTCCA
CCTCCTTCTCTGAAGCAAACCAGCCACGTGTCTTAATTACAGGGGGCCTTGGCCAGCTTGGAGT
GGGGCTTGCTAGCCTTTTGAGGAAACGGTTTGGGAAGGACAACGTGATTCTATCTGACATTCGG
AAGCCCCCCGAGCACGTCTTCCTCAGTGGCCCCTTTATTTATTCCGACATCCTGGATTACAAGA
ACCTTCGGGAGATCGTGGTGAACAACCGCGTCACCTGGCTGTTTCATTACAGTGCCCTGCTCAG
TGCGGTGGGCGAAGCAAATGTGTCCCTGGCCAGAGCCGTGAACATCACTGGGTTGCACAATGTC
CTGGATGTTGCCGCGGAGCATGGTCTGCGACTGTTCGTGCCCAGCACCATCGGGGCTTTTGGAC
CCACTTCTCCTCGGAACCCAACTCCCGATCTCTGCATCCAGAGACCCAGGACCATCTACGGGGT
GTCCAAGGTCCACGCAGAGCTCATGGGAGAGTATTATTATTACCGGTATGGGTTAGACTTCCGA
TGCCTGAGATATCCTGGGATCATTTCTGCCGACTCCCAGCCCGGAGGAGGAACGACTGACTACG
CGGTGCAGATCTTCCAGGACGCCGTCAAGAACGGCAGATTTGAATGCAACCTGAACCCTGGCAC
GAAGCTCCCCATGATGTACATCGATGACTGCCTGCGGGCCACCCTGGAGGTCATGGAGGCGCCG
GCGGAGGCCCTCTCCCTGAGGACCTACAACGTCAATGCCATGAGCTTCACCCCCGCCGAGCTGG
CCCAGGAGGTCCTCAAGCACATCCCGGAGTTCCAGATCACCTACAATGTGGACTCTGTCCGGCA
GGCCATAGCGGATAGTTGGCCAATGAACTTTGACGATAGCACCGCTCGGAGGGACTGGGGGTGG
AAACACGATTTTGACCTCCCGGAGCTGGTGACGACGATGTTGAACTTCCATGGTGCCCATAGCA
GAGTCGCCCAAGCTAACTGAAGCGCCGGAGGAAGCGTTCGTGAGTCCTGGGCGGCCGTCCAGGG
AAAACTGGAACCTCCCAACCCCCCAAGGTTCCAGAGCCCAAGGAATCTAGATGATATGGAGTTG
AAGGATTGATTGGACTAAATTTTCGCAGCTCATATTGAACTGCCAGATGGAAAATTGAGTTGGC
TTTAGCATTTTCTCAATGCCGTAGGTTTGGTGGTAGGACTTCTGAATTTTTGCTATTTGCCTAA
ATGTGTCCTAACACACATATCACAGAAGGCATCAGTCATAATAGTTTCCATGTCCTTAATTACG
ATGAAGTGACCATTTCTGGGAATGTGGAAGTATGTGACATTTGTATTAAACTTAATTTAAATAT
CACTCCTAAGATTCCATTTTTCTCTTGGCTAAGACCAAAGATTATATTCTAAAGACTATCAAAG
ATGATCTCCTACATGAATTCTTTACTATGCCATCAGAACATAAGAAAATGCCCAATGTATTAAT
CCCATGCCACTATATTCAAGCGATTTTAACCTGTCCAAAATTGTCACTCTAGAGTTCCCATGGT
GGCTCAGCAAGTTAAGAACCCAACATAGGTCCGTGAGGATGCAAGTTGGATCCCTGACCTTTCT
CAGTGGGTTAAGGACCCAGGAAATTAGGAATATCAAGAGATGGAGTTCACTTGTGGCATAGCAG
GTTAAGGACCCAGGCTTGTCTGAACTGGAGTGGCCCCACTCACTGCTGTGGCATAGGTTCCATT
CCTGTCCTGGGAACTTCCACATGCTGTGGGCATGAGCAAAAACAAAATAGCAGCCACTGGTCAA
GTGGAGCACCTCTTTCTTTGATTGCCTCCTGCTGGTGATCTGAGCAGCAGTGACTGGGACCGTG
ATCACTTACCTATAACGCCAGCCTCCCAGGGAACTTGCCTAAATACACAGGTTTCTGGGCCCCA
CCCCTTCAGGTGAACTCTGTTGGTGGGGATGGGACTCTCCAAGGACCACCAGTTATTCTCTTCC
ACACCCTCCTAGTATAGACCAATTCCAAGCATGATTTTCTTTCTTTCTTTCTTTTCTTTTTTTT
TTCTTTTGGTCTTTTTTAGGGCCACACTCACAGCATATGGAGATTCCCAGGTTAGGGGTTGAAT
TGGAGCGGCAGTTGCTGGCCTATACCACAGCCACAGCAGTGCCAGATCCGAGCTGCGTCTGTGA
CCTACACCACAGCTCACAGCAACCCCGGATCCTTAACCTGGTAAGCGAGGCCAGGGATTGAACC
TGTGTCCTCATGGATACTAGTCAGATTTGTTTCCGCTGAGCCAATGAAGAGAACTCCTCAAGCA
TGATTTTCTAAAAAGAACTTCCTTGCCTAGCCTTTTTGCACATTCTTAGATGAGCCTTCAGAAG
AGGTGCTGTAACCCTCTGAAGCAAGTACTATGTAAGTAGATACAGATGTACTTTTTTTCCAGCT
TCCCTGGGATGTGCTGCCTGTGAAATCACTGGAAAGTACAACTCCAGATTAATCTTGGGTCTCG
TGGACAGCAGCTGTCAAGGATTAAAAGGCATTTTTATTGTCTGTTTAATGACAGTCTTATGTAT
TTGGAATTTTCGCTGCTAGGTAGAAACATGAATTTTGGGGGGGAGGCATACCTGGATTTGAACT
TCTAGATAATCATTTAATTATTATGTTGATATAGTTTTTTTCCCTACTTAATATGATTAAGCTT
ACATTTGTACATTTTATTTGCCAAAATTAGTCTTTTTTTTTTTTTTTTTGGCTGCACCCATGCA
TGTGGAAGTTTTCAGGCCAGGAATCTAATCCAAGCTGCAGCTGTGACCCATGCCACAGCTGCAG
CAAGACTGGATCCTTAACCTACTGTGTCAGGCCAGGGATTGAAACGGTGCAGAGGTAGAGACAA
CACCAGATCCTTAACCCCTCTGTGCCACAGCAGGAACTCCCCAAACACCTAGACTTAAGATTTT
TTTTTTTTTTTACAACTTTATTGAGATAAGTTTCACATACTATAAGATTTACTCATTTAAAGTT
TACAGTTTGGTGATTTTTCAGTTTGTTGAGATTTGTGTAACCATTACTATAACTTTAGGCCATT
TCAGCATCCTTCCTCAAAGAAACTCTCCTCAGCCAAGGCAACCACTGATTTTCTTTCTGTGTCT
ATGAATTGGCCTGTTCTAGACATTTCATGTAAGCGGAATCATACGCTATGAGTGGCTTCTTTAG
CATAATATTTTCAAAGGTCATCCACGTCAGTACTCCGTGTCATTGCTGAATAGCGTTCCATTAT
GTATACACATTCCGTTTGTCCATTCATCAGTTGCGGGCTGTTTAGGTGGTTTGTACTTTTTGAT
TATTAGGAATAAATGCTGTTATGAA

hide sequence

RefSeq Acc Id:

XM_021072090 ⟹ XP_020927749

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	14,577,045 - 14,597,695 (+)	NCBI

Sequence:

show sequence

CTTTGCGCGCTCGGCGCTTTCGGACTCTTGGCCACGTGCAGCTCCGGCTTCCGCGCCGCGGCGC
AGCAGACTCTCTGGGCGGCTGTATTGGAAGCCTCTTCAACCTTTAAAAGGAAAAAAAGCCCCCA
AACTTCTTTACCTGTGGCCATCGTTACTTTGCTTTGGGGAGTTGAGAATTGTCTTTTGGCTGTT
GGCAGAGACCATGCCCGTTGTGAAGATGCTGAAGCAGGTTGCCAGCCGGACGCTGGGGAGCCCG
GCCTGTGGCTGCCAGCCACCCACCCTGCCCCGCCGGTTTCTGGGCACCTCCCCTCGGCAGATTC
CAGCAGACGCCAACTTCCACTCCACCTCCTTCTCTGAAGCAAACCAGCCACGTGTCTTAATTAC
AGGGGGCCTTGGCCAGCTTGGAGTGGGGCTTGCTAGCCTTTTGAGGAAACGGTTTGGGAAGGAC
AACGTGATTCTATCTGACATTCGGAAGCCCCCCGAGCACGTCTTCCTCAGTGGCCCCTTTATTT
ATTCCGACATCCTGGATTACAAGAACCTTCGGGAGATCGTGGTGAACAACCGCGTCACCTGGCT
GTTTCATTACAGTGCCCTGCTCAGTGCGGTGGGCGAAGCAAATGTGTCCCTGGCCAGAGCCGTG
AACATCACTGGGTTGCACAATGTCCTGGATGTTGCCGCGGAGCATGGTCTGCGACTGTTCGTGC
CCAGCACCATCGGGGCTTTTGGACCCACTTCTCCTCGGAACCCAACTCCCGATCTCTGCATCCA
GAGACCCAGGACCATCTACGGGGTGTCCAAGGTCCACGCAGAGCTCATGGGAGAGTATTATTAT
TACCGGTATGGGTTAGACTTCCGATGCCTGAGATATCCTGGGATCATTTCTGCCGACTCCCAGC
CCGGAGGAGGAACGACTGACTACGCGGTGCAGATCTTCCAGGACGCCGTCAAGAACGGCAGATT
TGAATGCAACCTGAACCCTGGCACGAAGCTCCCCATGATGTACATCGATGACTGCCTGCGGGCC
ACCCTGGAGGTCATGGAGGCGCCGGCGGAGGCCCTCTCCCTGAGGACCTACAACGTCAATGCCA
TGAGCTTCACCCCCGCCGAGCTGGCCCAGGAGGTCCTCAAGCACATCCCGGAGTTCCAGATCAC
CTACAATGTGGACTCTGTCCGGCAGGCCATAGCGGATAGTTGGCCAATGAACTTTGACGATAGC
ACCGCTCGGAGGGACTGGGGGTGGAAACACGATTTTGACCTCCCGGAGCTGGTGACGACGATGT
TGAACTTCCATGGTGCCCATAGCAGAGTCGCCCAAGCTAACTGAAGCGCCGGAGGAAGCGTTCG
TGAGTCCTGGGCGGCCGTCCAGGGAAAACTGGAACCTCCCAACCCCCCAAGGTTCCAGAGCCCA
AGGAATCTAGATGATATGGAGTTGAAGGATTGATTGGACTAAATTTTCGCAGCTCATATTGAAC
TGCCAGATGGAAAATTGAGTTGGCTTTAGCATTTTCTCAATGCCGTAGGTTTGGTGGTAGGACT
TCTGAATTTTTGCTATTTGCCTAAATGTGTCCTAACACACATATCACAGAAGGCATCAGTCATA
ATAGTTTCCATGTCCTTAATTACGATGAAGTGACCATTTCTGGGAATGTGGAAGTATGTGACAT
TTGTATTAAACTTAATTTAAATATCACTCCTAAGATTCCATTTTTCTCTTGGCTAAGACCAAAG
ATTATATTCTAAAGACTATCAAAGATGATCTCCTACATGAATTCTTTACTATGCCATCAGAACA
TAAGAAAATGCCCAATGTATTAATCCCATGCCACTATATTCAAGCGATTTTAACCTGTCCAAAA
TTGTCACTCTAGAGTTCCCATGGTGGCTCAGCAAGTTAAGAACCCAACATAGGTCCGTGAGGAT
GCAAGTTGGATCCCTGACCTTTCTCAGTGGGTTAAGGACCCAGGAAATTAGGAATATCAAGAGA
TGGAGTTCACTTGTGGCATAGCAGGTTAAGGACCCAGGCTTGTCTGAACTGGAGTGGCCCCACT
CACTGCTGTGGCATAGGTTCCATTCCTGTCCTGGGAACTTCCACATGCTGTGGGCATGAGCAAA
AACAAAATAGCAGCCACTGGTCAAGTGGAGCACCTCTTTCTTTGATTGCCTCCTGCTGGTGATC
TGAGCAGCAGTGACTGGGACCGTGATCACTTACCTATAACGCCAGCCTCCCAGGGAACTTGCCT
AAATACACAGGTTTCTGGGCCCCACCCCTTCAGGTGAACTCTGTTGGTGGGGATGGGACTCTCC
AAGGACCACCAGTTATTCTCTTCCACACCCTCCTAGTATAGACCAATTCCAAGCATGATTTTCT
TTCTTTCTTTCTTTTCTTTTTTTTTTCTTTTGGTCTTTTTTAGGGCCACACTCACAGCATATGG
AGATTCCCAGGTTAGGGGTTGAATTGGAGCGGCAGTTGCTGGCCTATACCACAGCCACAGCAGT
GCCAGATCCGAGCTGCGTCTGTGACCTACACCACAGCTCACAGCAACCCCGGATCCTTAACCTG
GTAAGCGAGGCCAGGGATTGAACCTGTGTCCTCATGGATACTAGTCAGATTTGTTTCCGCTGAG
CCAATGAAGAGAACTCCTCAAGCATGATTTTCTAAAAAGAACTTCCTTGCCTAGCCTTTTTGCA
CATTCTTAGATGAGCCTTCAGAAGAGGTGCTGTAACCCTCTGAAGCAAGTACTATGTAAGTAGA
TACAGATGTACTTTTTTTCCAGCTTCCCTGGGATGTGCTGCCTGTGAAATCACTGGAAAGTACA
ACTCCAGATTAATCTTGGGTCTCGTGGACAGCAGCTGTCAAGGATTAAAAGGCATTTTTATTGT
CTGTTTAATGACAGTCTTATGTATTTGGAATTTTCGCTGCTAGGTAGAAACATGAATTTTGGGG
GGGAGGCATACCTGGATTTGAACTTCTAGATAATCATTTAATTATTATGTTGATATAGTTTTTT
TCCCTACTTAATATGATTAAGCTTACATTTGTACATTTTATTTGCCAAAATTAGTCTTTTTTTT
TTTTTTTTTGGCTGCACCCATGCATGTGGAAGTTTTCAGGCCAGGAATCTAATCCAAGCTGCAG
CTGTGACCCATGCCACAGCTGCAGCAAGACTGGATCCTTAACCTACTGTGTCAGGCCAGGGATT
GAAACGGTGCAGAGGTAGAGACAACACCAGATCCTTAACCCCTCTGTGCCACAGCAGGAACTCC
CCAAACACCTAGACTTAAGATTTTTTTTTTTTTTTACAACTTTATTGAGATAAGTTTCACATAC
TATAAGATTTACTCATTTAAAGTTTACAGTTTGGTGATTTTTCAGTTTGTTGAGATTTGTGTAA
CCATTACTATAACTTTAGGCCATTTCAGCATCCTTCCTCAAAGAAACTCTCCTCAGCCAAGGCA
ACCACTGATTTTCTTTCTGTGTCTATGAATTGGCCTGTTCTAGACATTTCATGTAAGCGGAATC
ATACGCTATGAGTGGCTTCTTTAGCATAATATTTTCAAAGGTCATCCACGTCAGTACTCCGTGT
CATTGCTGAATAGCGTTCCATTATGTATACACATTCCGTTTGTCCATTCATCAGTTGCGGGCTG
TTTAGGTGGTTTGTACTTTTTGATTATTAGGAATAAATGCTGTTATGAA

hide sequence

RefSeq Acc Id:

XM_021072091 ⟹ XP_020927750

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	14,585,114 - 14,595,688 (+)	NCBI

Sequence:

show sequence

AGTGCAACTGTGATCCACTCCTGTGACGTGCTTGCCTGGGTACAGCTGACGAGGAAGAGGACAT
GGACTGCAATAAAATACATGTGATCTGGGAAGAGAGGAGAAAATAGCTTTTCTAAATGGTCCTT
TCTAAAGAGATGGCAGTGAAACAATAATTAGTCAGAGCTTCCTAAATATTGCTGAGGGCCTTTT
TAATCTTAACTGTCTGCTTTTCTAATCTGGTTCATCCTATCTCTTATCTGAGTTAGCATGAGAT
ACACAGGGCCTTGTGATATTTCACCTGGGACCTCGATGGTGCACGGAGAGATGATAAAGATGTA
AAGGCTGTTGGCAGAGACCATGCCCGTTGTGAAGATGCTGAAGCAGGTTGCCAGCCGGACGCTG
GGGAGCCCGGCCTGTGGCTGCCAGCCACCCACCCTGCCCCGCCGGTTTCTGGGCACCTCCCCTC
GGCAGATTCCAGCAGACGCCAACTTCCACTCCACCTCCTTCTCTGAAGCAAACCAGCCACGTGT
CTTAATTACAGGGGGCCTTGGCCAGCTTGGAGTGGGGCTTGCTAGCCTTTTGAGGAAACGGTTT
GGGAAGGACAACGTGATTCTATCTGACATTCGGAAGCCCCCCGAGCACGTCTTCCTCAGTGGCC
CCTTTATTTATTCCGACATCCTGGATTACAAGAACCTTCGGGAGATCGTGGTGAACAACCGCGT
CACCTGGCTGTTTCATTACAGTGCCCTGCTCAGTGCGGTGGGCGAAGCAAATGTGTCCCTGGCC
AGAGCCGTGAACATCACTGGGTTGCACAATGTCCTGGATGTTGCCGCGGAGCATGGTCTGCGAC
TGTTCGTGCCCAGCACCATCGGGGCTTTTGGACCCACTTCTCCTCGGAACCCAACTCCCGATCT
CTGCATCCAGAGACCCAGGACCATCTACGGGGTGTCCAAGGTCCACGCAGAGCTCATGGGAGAG
TATTATTATTACCGGTATGGGTTAGACTTCCGATGCCTGAGATATCCTGGGATCATTTCTGCCG
ACTCCCAGCCCGGAGGAGGAACGACTGACTACGCGGTGCAGATCTTCCAGGACGCCGTCAAGAA
CGGCAGATTTGAATGCAACCTGAACCCTGGCACGAAGCTCCCCATGATGTACATCGATGACTGC
CTGCGGGCCACCCTGGAGGTCATGGAGGCGCCGGCGGAGGCCCTCTCCCTGAGGACCTACAACG
TCAATGCCATGAGCTTCACCCCCGCCGAGCTGGCCCAGGAGGTCCTCAAGCACATCCCGGAGTT
CCAGATCACCTACAATGTGGACTCTGTCCGGCAGGCCATAGCGGATAGTTGGCCAATGAACTTT
GACGATAGCACCGCTCGGAGGGACTGGGGGTGGAAACACGATTTTGACCTCCCGGAGCTGGTGA
CGACGATGTTGAACTTCCATGGTGCCCATAGCAGAGTCGCCCAAGCTAACTGAAGCGCCGGAGG
AAGCGTTCGTGAGTCCTGGGCGGCCGTCCAGGGAAAACTGGAACCTCCCAACCCCCCAAGGTTC
CAGAGCCCAAGGAATCTAGATGATATGGAGTTGAAGGATTGATTGGACTAAATTTTCGCAGCTC
ATATTGAACTGCCAGATGGAAAATTGAGTTGGCTTTAGCATTTTCTCAATGCCGTAGGTTTGGT
GGTAGGACTTCTGAATTTTTGCTATTTGCCTAAATGTGTCCTAACACACATATCACAGAAGGCA
TCAGTCATAATAGTTTCCATGTCCTTAATTACGATGAAGTGACCATTTCTGGGAATGTGGAAGT
ATGTGACATTTGTATTAAACTTAATTTAAATATCA

hide sequence

RefSeq Acc Id:

XM_021072092 ⟹ XP_020927751

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	14,577,009 - 14,595,688 (+)	NCBI

Sequence:

show sequence

GAAGGGATAAAGGCGCTGCTCGCCTAGCCTACTCTGCTTTGCGCGCTCGGCGCTTTCGGACTCT
TGGCCACGTGCAGCTCCGGCTTCCGCGCCGCGGCGCAGCAGACTCTCTGGGCGGCTGTATTGGA
AGGCTGTTGGCAGAGACCATGCCCGTTGTGAAGATGCTGAAGCAGGTTGCCAGCCGGACGCTGG
GGAGCCCGGCCTGTGGCTGCCAGCCACCCACCCTGCCCCGCCGGTTTCTGGGCACCTCCCCTCG
GCAGATTCCAGCAGACGCCAACTTCCACTCCACCTCCTTCTCTGAAGCAAACCAGCCACGTGTC
TTAATTACAGGGGGCCTTGGCCAGCTTGGAGTGGGGCTTGCTAGCCTTTTGAGGAAACGGTTTG
GGAAGGACAACGTGATTCTATCTGACATTCGGAAGCCCCCCGAGCACGTCTTCCTCAGTGGCCC
CTTTATTTATTCCGACATCCTGGATTACAAGAACCTTCGGGAGATCGTGGTGAACAACCGCGTC
ACCTGGCTGTTTCATTACAGTGCCCTGCTCAGTGCGGTGGGCGAAGCAAATGTGTCCCTGGCCA
GAGCCGTGAACATCACTGGGTTGCACAATGTCCTGGATGTTGCCGCGGAGCATGGTCTGCGACT
GTTCGTGCCCAGCACCATCGGGGCTTTTGGACCCACTTCTCCTCGGAACCCAACTCCCGATCTC
TGCATCCAGAGACCCAGGACCATCTACGGGGTGTCCAAGGTCCACGCAGAGCTCATGGGAGAGT
ATTATTATTACCGGTATGGGTTAGACTTCCGATGCCTGAGATATCCTGGGATCATTTCTGCCGA
CTCCCAGCCCGGAGGAGGAACGACTGACTACGCGGTGCAGATCTTCCAGGACGCCGTCAAGAAC
GGCAGATTTGAATGCAACCTGAACCCTGGCACGAAGCTCCCCATGATGTACATCGATGACTGCC
TGCGGGCCACCCTGGAGGTCATGGAGGCGCCGGCGGAGGCCCTCTCCCTGAGGACCTACAACGT
CAATGCCATGAGCTTCACCCCCGCCGAGCTGGCCCAGGAGGTCCTCAAGCACATCCCGGAGTTC
CAGATCACCTACAATGTGGACTCTGTCCGGCAGGCCATAGCGGATAGTTGGCCAATGAACTTTG
ACGATAGCACCGCTCGGAGGGACTGGGGGTGGAAACACGATTTTGACCTCCCGGAGCTGGTGAC
GACGATGTTGAACTTCCATGGTGCCCATAGCAGAGTCGCCCAAGCTAACTGAAGCGCCGGAGGA
AGCGTTCGTGAGTCCTGGGCGGCCGTCCAGGGAAAACTGGAACCTCCCAACCCCCCAAGGTTCC
AGAGCCCAAGGAATCTAGATGATATGGAGTTGAAGGATTGATTGGACTAAATTTTCGCAGCTCA
TATTGAACTGCCAGATGGAAAATTGAGTTGGCTTTAGCATTTTCTCAATGCCGTAGGTTTGGTG
GTAGGACTTCTGAATTTTTGCTATTTGCCTAAATGTGTCCTAACACACATATCACAGAAGGCAT
CAGTCATAATAGTTTCCATGTCCTTAATTACGATGAAGTGACCATTTCTGGGAATGTGGAAGTA
TGTGACATTTGTATTAAACTTAATTTAAATATCA

hide sequence

RefSeq Acc Id:

XM_021072093 ⟹ XP_020927752

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	14,585,671 - 14,595,688 (+)	NCBI

Sequence:

show sequence

TCTCTTTAGTTCAGTTTCTGAATCCAGAACATGGCTTTGCTCGAGAACTGTCGATCTGATCTTA
GTGCTGTTGGCAGAGACCATGCCCGTTGTGAAGATGCTGAAGCAGGTTGCCAGCCGGACGCTGG
GGAGCCCGGCCTGTGGCTGCCAGCCACCCACCCTGCCCCGCCGGTTTCTGGGCACCTCCCCTCG
GCAGATTCCAGCAGACGCCAACTTCCACTCCACCTCCTTCTCTGAAGCAAACCAGCCACGTGTC
TTAATTACAGGGGGCCTTGGCCAGCTTGGAGTGGGGCTTGCTAGCCTTTTGAGGAAACGGTTTG
GGAAGGACAACGTGATTCTATCTGACATTCGGAAGCCCCCCGAGCACGTCTTCCTCAGTGGCCC
CTTTATTTATTCCGACATCCTGGATTACAAGAACCTTCGGGAGATCGTGGTGAACAACCGCGTC
ACCTGGCTGTTTCATTACAGTGCCCTGCTCAGTGCGGTGGGCGAAGCAAATGTGTCCCTGGCCA
GAGCCGTGAACATCACTGGGTTGCACAATGTCCTGGATGTTGCCGCGGAGCATGGTCTGCGACT
GTTCGTGCCCAGCACCATCGGGGCTTTTGGACCCACTTCTCCTCGGAACCCAACTCCCGATCTC
TGCATCCAGAGACCCAGGACCATCTACGGGGTGTCCAAGGTCCACGCAGAGCTCATGGGAGAGT
ATTATTATTACCGGTATGGGTTAGACTTCCGATGCCTGAGATATCCTGGGATCATTTCTGCCGA
CTCCCAGCCCGGAGGAGGAACGACTGACTACGCGGTGCAGATCTTCCAGGACGCCGTCAAGAAC
GGCAGATTTGAATGCAACCTGAACCCTGGCACGAAGCTCCCCATGATGTACATCGATGACTGCC
TGCGGGCCACCCTGGAGGTCATGGAGGCGCCGGCGGAGGCCCTCTCCCTGAGGACCTACAACGT
CAATGCCATGAGCTTCACCCCCGCCGAGCTGGCCCAGGAGGTCCTCAAGCACATCCCGGAGTTC
CAGATCACCTACAATGTGGACTCTGTCCGGCAGGCCATAGCGGATAGTTGGCCAATGAACTTTG
ACGATAGCACCGCTCGGAGGGACTGGGGGTGGAAACACGATTTTGACCTCCCGGAGCTGGTGAC
GACGATGTTGAACTTCCATGGTGCCCATAGCAGAGTCGCCCAAGCTAACTGAAGCGCCGGAGGA
AGCGTTCGTGAGTCCTGGGCGGCCGTCCAGGGAAAACTGGAACCTCCCAACCCCCCAAGGTTCC
AGAGCCCAAGGAATCTAGATGATATGGAGTTGAAGGATTGATTGGACTAAATTTTCGCAGCTCA
TATTGAACTGCCAGATGGAAAATTGAGTTGGCTTTAGCATTTTCTCAATGCCGTAGGTTTGGTG
GTAGGACTTCTGAATTTTTGCTATTTGCCTAAATGTGTCCTAACACACATATCACAGAAGGCAT
CAGTCATAATAGTTTCCATGTCCTTAATTACGATGAAGTGACCATTTCTGGGAATGTGGAAGTA
TGTGACATTTGTATTAAACTTAATTTAAATATCA

hide sequence

Protein Sequences


Protein RefSeqs	NP_999169	(Get FASTA)	NCBI Sequence Viewer
	XP_005658678	(Get FASTA)	NCBI Sequence Viewer
	XP_020927749	(Get FASTA)	NCBI Sequence Viewer
	XP_020927750	(Get FASTA)	NCBI Sequence Viewer
	XP_020927751	(Get FASTA)	NCBI Sequence Viewer
	XP_020927752	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAM18208	(Get FASTA)	NCBI Sequence Viewer
	Q8MIR0	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

XP_020927751 ⟸ XM_021072092

- Peptide Label:

isoform X1

- Sequence:

show sequence

MPVVKMLKQVASRTLGSPACGCQPPTLPRRFLGTSPRQIPADANFHSTSFSEANQPRVLITGGL
GQLGVGLASLLRKRFGKDNVILSDIRKPPEHVFLSGPFIYSDILDYKNLREIVVNNRVTWLFHY
SALLSAVGEANVSLARAVNITGLHNVLDVAAEHGLRLFVPSTIGAFGPTSPRNPTPDLCIQRPR
TIYGVSKVHAELMGEYYYYRYGLDFRCLRYPGIISADSQPGGGTTDYAVQIFQDAVKNGRFECN
LNPGTKLPMMYIDDCLRATLEVMEAPAEALSLRTYNVNAMSFTPAELAQEVLKHIPEFQITYNV
DSVRQAIADSWPMNFDDSTARRDWGWKHDFDLPELVTTMLNFHGAHSRVAQAN

hide sequence

RefSeq Acc Id:

XP_020927749 ⟸ XM_021072090

- Peptide Label:

isoform X1

- Sequence:

show sequence

MPVVKMLKQVASRTLGSPACGCQPPTLPRRFLGTSPRQIPADANFHSTSFSEANQPRVLITGGL
GQLGVGLASLLRKRFGKDNVILSDIRKPPEHVFLSGPFIYSDILDYKNLREIVVNNRVTWLFHY
SALLSAVGEANVSLARAVNITGLHNVLDVAAEHGLRLFVPSTIGAFGPTSPRNPTPDLCIQRPR
TIYGVSKVHAELMGEYYYYRYGLDFRCLRYPGIISADSQPGGGTTDYAVQIFQDAVKNGRFECN
LNPGTKLPMMYIDDCLRATLEVMEAPAEALSLRTYNVNAMSFTPAELAQEVLKHIPEFQITYNV
DSVRQAIADSWPMNFDDSTARRDWGWKHDFDLPELVTTMLNFHGAHSRVAQAN

hide sequence

RefSeq Acc Id:

XP_020927750 ⟸ XM_021072091

- Peptide Label:

isoform X1

- Sequence:

show sequence

MPVVKMLKQVASRTLGSPACGCQPPTLPRRFLGTSPRQIPADANFHSTSFSEANQPRVLITGGL
GQLGVGLASLLRKRFGKDNVILSDIRKPPEHVFLSGPFIYSDILDYKNLREIVVNNRVTWLFHY
SALLSAVGEANVSLARAVNITGLHNVLDVAAEHGLRLFVPSTIGAFGPTSPRNPTPDLCIQRPR
TIYGVSKVHAELMGEYYYYRYGLDFRCLRYPGIISADSQPGGGTTDYAVQIFQDAVKNGRFECN
LNPGTKLPMMYIDDCLRATLEVMEAPAEALSLRTYNVNAMSFTPAELAQEVLKHIPEFQITYNV
DSVRQAIADSWPMNFDDSTARRDWGWKHDFDLPELVTTMLNFHGAHSRVAQAN

hide sequence

RefSeq Acc Id:	XP_005658678 ⟸ XM_005658621
- Peptide Label:	isoform X1
- UniProtKB:	Q8MIR0 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MPVVKMLKQVASRTLGSPACGCQPPTLPRRFLGTSPRQIPADANFHSTSFSEANQPRVLITGGL GQLGVGLASLLRKRFGKDNVILSDIRKPPEHVFLSGPFIYSDILDYKNLREIVVNNRVTWLFHY SALLSAVGEANVSLARAVNITGLHNVLDVAAEHGLRLFVPSTIGAFGPTSPRNPTPDLCIQRPR TIYGVSKVHAELMGEYYYYRYGLDFRCLRYPGIISADSQPGGGTTDYAVQIFQDAVKNGRFECN LNPGTKLPMMYIDDCLRATLEVMEAPAEALSLRTYNVNAMSFTPAELAQEVLKHIPEFQITYNV DSVRQAIADSWPMNFDDSTARRDWGWKHDFDLPELVTTMLNFHGAHSRVAQAN hide sequence

RefSeq Acc Id:

XP_020927752 ⟸ XM_021072093

- Peptide Label:

isoform X1

- Sequence:

show sequence

MPVVKMLKQVASRTLGSPACGCQPPTLPRRFLGTSPRQIPADANFHSTSFSEANQPRVLITGGL
GQLGVGLASLLRKRFGKDNVILSDIRKPPEHVFLSGPFIYSDILDYKNLREIVVNNRVTWLFHY
SALLSAVGEANVSLARAVNITGLHNVLDVAAEHGLRLFVPSTIGAFGPTSPRNPTPDLCIQRPR
TIYGVSKVHAELMGEYYYYRYGLDFRCLRYPGIISADSQPGGGTTDYAVQIFQDAVKNGRFECN
LNPGTKLPMMYIDDCLRATLEVMEAPAEALSLRTYNVNAMSFTPAELAQEVLKHIPEFQITYNV
DSVRQAIADSWPMNFDDSTARRDWGWKHDFDLPELVTTMLNFHGAHSRVAQAN

hide sequence

RefSeq Acc Id:	NP_999169 ⟸ NM_214004
- Peptide Label:	precursor
- UniProtKB:	Q8MIR0 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MPVVKMLKQVASRTLGSPACGCQPPTLPRRFLGTSPRQIPADANFHSTSFSEANQPRVLITGGL GQLGVGLASLLRKRFGKDNVILSDIRKPPEHVFLSGPFIYSDILDYKNLREIVVNNRVTWLFHY SALLSAVGEANVSLARAVNITGLHNVLDVAAEHGLRLFVPSTIGAFGPTSPRNPTPDLCIQRPR TIYGVSKVHAELMGEYYYYRYGLDFRCLRYPGIISADSQPGGGTTDYAVQIFQDAVKNGRFECN LNPGTKLPMMYIDDCLRATLEVMEAPAEALSLRTYNVNAMSFTPAELAQEVLKHIPEFQITYNV DSVRQAIADSWPMNFDDSTARRDWGWKHDFDLPELVTTMLNFHGAHSRVAQAN hide sequence

Protein Domains

Epimerase

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000021767	ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSSSCG00015026648	UniProtKB/Swiss-Prot
	ENSSSCG00030001111	UniProtKB/Swiss-Prot
	ENSSSCG00040053878	UniProtKB/Swiss-Prot
	ENSSSCG00045019984	UniProtKB/Swiss-Prot
	ENSSSCG00050009861	UniProtKB/Swiss-Prot
	ENSSSCG00060065355	UniProtKB/Swiss-Prot
Ensembl Protein	ENSSSCP00000028187	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSSSCP00000036944	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCP00015014081	UniProtKB/Swiss-Prot
	ENSSSCP00030000654	UniProtKB/Swiss-Prot
	ENSSSCP00040031158	UniProtKB/Swiss-Prot
	ENSSSCP00045023642	UniProtKB/Swiss-Prot
	ENSSSCP00050005490	UniProtKB/Swiss-Prot
	ENSSSCP00060038629	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSSSCT00000022297	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSSSCT00000061419	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCT00015035385	UniProtKB/Swiss-Prot
	ENSSSCT00030001476	UniProtKB/Swiss-Prot
	ENSSSCT00040072875	UniProtKB/Swiss-Prot
	ENSSSCT00045034071	UniProtKB/Swiss-Prot
	ENSSSCT00050013278	UniProtKB/Swiss-Prot
	ENSSSCT00060089223	UniProtKB/Swiss-Prot
InterPro	Epimerase_deHydtase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	NAD(P)-bd_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	ssc:397065	UniProtKB/Swiss-Prot
NCBI Gene	TDH	ENTREZGENE
Pfam	Epimerase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF51735	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A5S6HAC8_PIG	UniProtKB/TrEMBL
	Q8MIR0	ENTREZGENE, UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)