PRX (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 6 | 48,675,418 - 48,685,851 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 48,675,230 - 48,691,760 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 44,422,864 - 44,434,236 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
PRX (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 19 | 40,393,764 - 40,414,789 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 19 | 40,393,766 - 40,414,793 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 19 | 40,899,671 - 40,919,285 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 19 | 45,591,511 - 45,611,111 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 19 | 45,591,514 - 45,611,111 | NCBI | | | | | Celera | 19 | 37,699,214 - 37,718,819 (-) | NCBI | | Celera | | | Cytogenetic Map | 19 | q13.2 | NCBI | | | | | HuRef | 19 | 37,335,252 - 37,354,296 (-) | NCBI | | HuRef | | | CHM1_1 | 19 | 40,899,344 - 40,918,924 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 19 | 43,214,390 - 43,235,423 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Prx (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 7 | 27,198,730 - 27,219,466 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 7 | 27,196,813 - 27,219,639 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 7 | 27,499,305 - 27,520,041 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 7 | 27,497,388 - 27,520,214 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 7 | 28,284,343 - 28,305,060 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 7 | 27,208,084 - 27,228,974 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 7 | 22,081,698 - 22,102,493 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | A3 | NCBI | | | | | cM Map | 7 | 15.91 | NCBI | | | | |
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Prx (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 1 | 91,912,669 - 91,934,754 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 82,785,082 - 82,807,154 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 82,786,815 - 82,807,407 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 88,189,694 - 88,210,039 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 96,676,781 - 96,697,259 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 89,945,557 - 89,965,902 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 84,302,074 - 84,324,560 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 84,304,228 - 84,324,560 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 85,519,732 - 85,541,381 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 82,577,850 - 82,598,184 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 82,655,960 - 82,676,295 (+) | NCBI | | | | | Celera | 1 | 77,201,508 - 77,221,825 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q21 | NCBI | | | | |
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Prx (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955578 | 868,534 - 874,168 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955578 | 852,789 - 873,319 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
PRX (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 20 | 46,656,847 - 46,676,387 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 19 | 48,527,511 - 48,547,054 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 19 | 37,442,299 - 37,461,844 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 19 | 45,952,420 - 45,971,987 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 19 | 45,952,420 - 45,971,987 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
PRX (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 1 | 113,279,940 - 113,294,042 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 1 | 112,681,885 - 112,695,982 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 1 | 113,878,300 - 113,892,405 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 1 | 113,877,985 - 113,892,401 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 1 | 113,437,602 - 113,451,668 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 1 | 113,070,068 - 113,084,170 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 1 | 114,064,062 - 114,078,156 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Prx (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024409349 | 14,344,377 - 14,358,524 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936661 | 2,772,621 - 2,787,647 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936661 | 2,772,446 - 2,783,120 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
PRX (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 6 | 34,851,977 - 34,870,413 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 6 | 34,851,979 - 34,864,967 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666073 | 12,947,541 - 12,966,190 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Prx (Heterocephalus glaber - naked mole-rat) |
|