MTARC1 (mitochondrial amidoxime reducing component 1) - Rat Genome Database

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Gene: MTARC1 (mitochondrial amidoxime reducing component 1) Sus scrofa
Analyze
Symbol: MTARC1
Name: mitochondrial amidoxime reducing component 1
RGD ID: 13927045
Description: ENCODES a protein that exhibits nitrite reductase (NO-forming) activity (ortholog); INVOLVED IN cellular detoxification of nitrogen compound (inferred); nitrate metabolic process (inferred); nitric oxide biosynthetic process (inferred); ASSOCIATED WITH amphetamine abuse (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN membrane (inferred); mitochondrial inner membrane (inferred); mitochondrial outer membrane (inferred); INTERACTS WITH deoxynivalenol
Type: protein-coding
RefSeq Status: MODEL
Previously known as: MARC1; mitochondrial amidoxime-reducing component 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1010,190,835 - 10,216,175 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11010,190,759 - 10,264,467 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21012,257,867 - 12,288,355 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:21029045   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
MTARC1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1010,190,835 - 10,216,175 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11010,190,759 - 10,264,467 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21012,257,867 - 12,288,355 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MTARC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381220,786,913 - 220,819,659 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1220,786,352 - 220,819,659 (+)EnsemblGRCh38hg38GRCh38
GRCh371220,960,255 - 220,993,001 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361219,026,894 - 219,054,353 (+)NCBINCBI36Build 36hg18NCBI36
Celera1194,179,397 - 194,207,116 (+)NCBICelera
Cytogenetic Map1q41NCBI
HuRef1191,634,656 - 191,662,358 (+)NCBIHuRef
CHM1_11222,232,498 - 222,260,205 (+)NCBICHM1_1
T2T-CHM13v2.01220,026,620 - 220,059,373 (+)NCBIT2T-CHM13v2.0
Mtarc1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391184,518,964 - 184,543,622 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1184,518,964 - 184,543,394 (-)EnsemblGRCm39 Ensembl
GRCm381184,786,767 - 184,811,743 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1184,786,767 - 184,811,313 (-)EnsemblGRCm38mm10GRCm38
MGSCv371186,610,646 - 186,635,192 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361186,487,555 - 186,512,101 (-)NCBIMGSCv36mm8
Celera1191,748,956 - 191,773,778 (-)NCBICelera
Cytogenetic Map1H5NCBI
cM Map189.07NCBI
Mtarc1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81398,854,235 - 98,894,208 (-)NCBIGRCr8
mRatBN7.21396,324,377 - 96,362,677 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1396,339,757 - 96,397,796 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1398,845,403 - 98,868,427 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.013100,244,818 - 100,267,603 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01397,427,640 - 97,450,660 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.013102,693,679 - 102,724,120 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl13102,698,546 - 102,721,218 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013107,375,873 - 107,398,500 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.413100,747,272 - 100,806,258 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1395,859,205 - 95,880,141 (-)NCBICelera
Cytogenetic Map13q26NCBI
MTARC1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2128,585,807 - 28,613,469 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1128,547,598 - 28,575,285 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01196,373,028 - 196,405,115 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11201,407,483 - 201,435,186 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1201,407,390 - 201,435,186 (+)Ensemblpanpan1.1panPan2
MTARC1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13815,460,548 - 15,490,941 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3815,463,548 - 15,532,241 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3815,501,865 - 15,532,434 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03815,496,387 - 15,527,068 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3815,451,494 - 15,522,862 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13815,503,851 - 15,534,357 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03815,858,250 - 15,883,444 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03816,151,276 - 16,181,816 (+)NCBIUU_Cfam_GSD_1.0
Mtarc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934456,229,847 - 56,255,778 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366501,478,037 - 1,504,611 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366501,477,138 - 1,504,501 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MTARC1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1258,654,316 - 8,744,579 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl258,717,436 - 8,743,652 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660559,000,217 - 9,029,492 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mtarc1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248354,164,672 - 4,177,365 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248354,164,755 - 4,177,931 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in MTARC1
3318 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 2 1 2 17 2
Low 10 4 1 4 6 3 1
Below cutoff 1

Sequence


RefSeq Acc Id: ENSSSCT00000011847   ⟹   ENSSSCP00000011544
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1010,190,835 - 10,216,175 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000061361   ⟹   ENSSSCP00000052212
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1010,190,835 - 10,216,174 (+)Ensembl
RefSeq Acc Id: XM_021064337   ⟹   XP_020919996
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11010,190,759 - 10,252,851 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021064338   ⟹   XP_020919997
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11010,190,761 - 10,209,879 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021064339   ⟹   XP_020919998
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11010,190,773 - 10,216,177 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021064341   ⟹   XP_020920000
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11010,190,762 - 10,264,467 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021064342   ⟹   XP_020920001
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11010,190,766 - 10,216,177 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021064343   ⟹   XP_020920002
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11010,190,767 - 10,232,978 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002336192
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11010,190,761 - 10,264,467 (+)NCBI
Sequence:
RefSeq Acc Id: XP_020919996   ⟸   XM_021064337
- Peptide Label: isoform X1
- UniProtKB: A0A8D0QWK8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020919997   ⟸   XM_021064338
- Peptide Label: isoform X2
- UniProtKB: A0A8D0QXN9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020920000   ⟸   XM_021064341
- Peptide Label: isoform X4
- UniProtKB: A0A8D0QXN9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020920001   ⟸   XM_021064342
- Peptide Label: isoform X5
- UniProtKB: A0A8D0QWN3 (UniProtKB/TrEMBL),   F1S9I6 (UniProtKB/TrEMBL),   A0A8D1VK81 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020920002   ⟸   XM_021064343
- Peptide Label: isoform X6
- UniProtKB: A0A8D0QXN9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020919998   ⟸   XM_021064339
- Peptide Label: isoform X3
- UniProtKB: A0A287B6R1 (UniProtKB/TrEMBL),   A0A8D0UIS7 (UniProtKB/TrEMBL),   A0A480LA85 (UniProtKB/TrEMBL),   A0A8D1VI41 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000011544   ⟸   ENSSSCT00000011847
RefSeq Acc Id: ENSSSCP00000052212   ⟸   ENSSSCT00000061361
Protein Domains
MOSC


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000010829 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00025014586 UniProtKB/TrEMBL
  ENSSSCG00030047445 UniProtKB/TrEMBL
  ENSSSCG00030047555 UniProtKB/TrEMBL
  ENSSSCG00035044320 UniProtKB/TrEMBL
  ENSSSCG00040014193 UniProtKB/TrEMBL
  ENSSSCG00045024521 UniProtKB/TrEMBL
  ENSSSCG00055007767 UniProtKB/TrEMBL
  ENSSSCG00060043684 UniProtKB/TrEMBL
  ENSSSCG00065073385 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000011847 ENTREZGENE
  ENSSSCT00000011847.5 UniProtKB/TrEMBL
  ENSSSCT00000061361 ENTREZGENE
  ENSSSCT00000061361.3 UniProtKB/TrEMBL
  ENSSSCT00025019456.1 UniProtKB/TrEMBL
  ENSSSCT00025019523.1 UniProtKB/TrEMBL
  ENSSSCT00025019556.1 UniProtKB/TrEMBL
  ENSSSCT00025019724.1 UniProtKB/TrEMBL
  ENSSSCT00025019840.1 UniProtKB/TrEMBL
  ENSSSCT00030066276.1 UniProtKB/TrEMBL
  ENSSSCT00030066449.1 UniProtKB/TrEMBL
  ENSSSCT00030066481.1 UniProtKB/TrEMBL
  ENSSSCT00035058883.1 UniProtKB/TrEMBL
  ENSSSCT00040018962.1 UniProtKB/TrEMBL
  ENSSSCT00040018989.1 UniProtKB/TrEMBL
  ENSSSCT00040019043.1 UniProtKB/TrEMBL
  ENSSSCT00040019080.1 UniProtKB/TrEMBL
  ENSSSCT00040019131.1 UniProtKB/TrEMBL
  ENSSSCT00040019159.1 UniProtKB/TrEMBL
  ENSSSCT00040019176.1 UniProtKB/TrEMBL
  ENSSSCT00040019203.1 UniProtKB/TrEMBL
  ENSSSCT00040019230.1 UniProtKB/TrEMBL
  ENSSSCT00040019244.1 UniProtKB/TrEMBL
  ENSSSCT00045041946.1 UniProtKB/TrEMBL
  ENSSSCT00055015170.1 UniProtKB/TrEMBL
  ENSSSCT00055015258.1 UniProtKB/TrEMBL
  ENSSSCT00055015339.1 UniProtKB/TrEMBL
  ENSSSCT00060059247.1 UniProtKB/TrEMBL
  ENSSSCT00060059252.1 UniProtKB/TrEMBL
  ENSSSCT00065101057.1 UniProtKB/TrEMBL
InterPro MoCF_Sase_C UniProtKB/TrEMBL
  MOSC_N UniProtKB/TrEMBL
  Pyrv_Knase-like_insert_dom_sf UniProtKB/TrEMBL
NCBI Gene MARC1 ENTREZGENE
PANTHER METAL-SULFUR CLUSTER BIOSYNTHESIS PROTEINS YUAD-RELATED UniProtKB/TrEMBL
  MITOCHONDRIAL AMIDOXIME REDUCING COMPONENT 2 UniProtKB/TrEMBL
  MITOCHONDRIAL AMIDOXIME-REDUCING COMPONENT 1 UniProtKB/TrEMBL
  MOLYBDOPTERIN COFACTOR SULFURASE MOSC UniProtKB/TrEMBL
  MOSC DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
Pfam MOSC UniProtKB/TrEMBL
  MOSC_N UniProtKB/TrEMBL
PROSITE MOSC UniProtKB/TrEMBL
Superfamily-SCOP MOSC N-terminal domain-like UniProtKB/TrEMBL
  SSF50800 UniProtKB/TrEMBL
UniProt A0A287B6R1 ENTREZGENE, UniProtKB/TrEMBL
  A0A480LA85 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0QWK8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0QWN3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0QXN9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0UIS7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0X3V4_PIG UniProtKB/TrEMBL
  A0A8D0X4F8_PIG UniProtKB/TrEMBL
  A0A8D0ZXU3_PIG UniProtKB/TrEMBL
  A0A8D1DIN0_PIG UniProtKB/TrEMBL
  A0A8D1DIW9_PIG UniProtKB/TrEMBL
  A0A8D1DJ43_PIG UniProtKB/TrEMBL
  A0A8D1DJ48_PIG UniProtKB/TrEMBL
  A0A8D1DJM5_PIG UniProtKB/TrEMBL
  A0A8D1DJT1_PIG UniProtKB/TrEMBL
  A0A8D1DJX4_PIG UniProtKB/TrEMBL
  A0A8D1DK37_PIG UniProtKB/TrEMBL
  A0A8D1K3A7_PIG UniProtKB/TrEMBL
  A0A8D1VI41 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1VK81 ENTREZGENE, UniProtKB/TrEMBL
  F1S9I6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-10-01 MTARC1  mitochondrial amidoxime reducing component 1  MARC1  mitochondrial amidoxime reducing component 1  Symbol and/or name change 5135510 APPROVED