MAZ (MYC associated zinc finger protein) - Rat Genome Database

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Gene: MAZ (MYC associated zinc finger protein) Sus scrofa
Analyze
Symbol: MAZ
Name: MYC associated zinc finger protein
RGD ID: 13923424
Description: ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); chromosome 16p11.2 deletion syndrome, 593-kb (ortholog); FOUND IN cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: MYC-associated zinc finger protein (purine-binding transcription factor); SAF-1; serum amyloid A activating factor 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl318,042,007 - 18,047,530 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1318,043,032 - 18,047,531 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2318,543,783 - 18,548,329 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:14681463   PMID:15528467   PMID:17145712   PMID:30032202  


Genomics

Comparative Map Data
MAZ
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl318,042,007 - 18,047,530 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1318,043,032 - 18,047,531 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2318,543,783 - 18,548,329 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MAZ
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381629,806,124 - 29,811,164 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1629,806,106 - 29,811,164 (+)EnsemblGRCh38hg38GRCh38
GRCh371629,817,445 - 29,822,485 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361629,725,356 - 29,730,005 (+)NCBINCBI36Build 36hg18NCBI36
Build 341629,725,324 - 29,729,206NCBI
Celera1672,973,757 - 72,978,406 (-)NCBICelera
Cytogenetic Map16p11.2NCBI
HuRef1627,479,157 - 27,483,142 (+)NCBIHuRef
CHM1_11631,033,388 - 31,038,313 (+)NCBICHM1_1
T2T-CHM13v2.01630,088,290 - 30,093,330 (+)NCBIT2T-CHM13v2.0
Maz
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397126,621,306 - 126,626,177 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7126,621,302 - 126,626,209 (-)EnsemblGRCm39 Ensembl
GRCm387127,021,450 - 127,027,188 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7127,022,130 - 127,027,037 (-)EnsemblGRCm38mm10GRCm38
MGSCv377134,165,648 - 134,169,993 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367126,813,256 - 126,817,859 (-)NCBIMGSCv36mm8
Celera7126,870,262 - 126,874,607 (-)NCBICelera
Cytogenetic Map7F3NCBI
cM Map769.28NCBI
Maz
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81191,060,271 - 191,065,722 (-)NCBIGRCr8
mRatBN7.21181,629,742 - 181,635,193 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1181,629,729 - 181,650,408 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1189,982,003 - 189,985,439 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01197,168,086 - 197,171,522 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01189,835,469 - 189,838,901 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01198,456,699 - 198,460,126 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1198,456,699 - 198,460,126 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01205,437,135 - 205,440,514 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41186,201,083 - 186,204,364 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1179,285,284 - 179,288,689 (-)NCBICelera
Cytogenetic Map1q37NCBI
Maz
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554937,149,600 - 7,152,449 (-)NCBIChiLan1.0ChiLan1.0
MAZ
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21830,555,332 - 30,560,750 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11635,665,122 - 35,670,241 (-)NCBINHGRI_mPanPan1
PanPan1.11630,042,088 - 30,181,462 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1630,049,806 - 30,070,469 (+)Ensemblpanpan1.1panPan2
MAZ
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1617,867,491 - 17,870,108 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl617,867,488 - 17,870,197 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha619,443,300 - 19,448,404 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0618,000,104 - 18,005,224 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl617,999,063 - 18,005,197 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1617,799,627 - 17,804,726 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0617,715,332 - 17,720,421 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0618,030,614 - 18,035,717 (+)NCBIUU_Cfam_GSD_1.0
Maz
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344124,567,001 - 124,570,961 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493650112,664,861 - 12,668,819 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAZ
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1526,842,930 - 26,847,759 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660682,680,895 - 2,684,842 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Maz
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478213,395,273 - 13,398,250 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in MAZ
98 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 3 2 2 3 2 8 1
Low 7 2 1 2 15 2 3 2
Below cutoff

Sequence


RefSeq Acc Id: ENSSSCT00000027242   ⟹   ENSSSCP00000026774
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl318,042,007 - 18,047,529 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000068806   ⟹   ENSSSCP00000073123
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl318,042,007 - 18,047,530 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000069825   ⟹   ENSSSCP00000063950
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl318,043,047 - 18,047,530 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000071842   ⟹   ENSSSCP00000060598
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl318,043,047 - 18,047,530 (+)Ensembl
RefSeq Acc Id: XM_003354553   ⟹   XP_003354601
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1318,043,032 - 18,047,531 (+)NCBI
Sequence:
RefSeq Acc Id: XP_003354601   ⟸   XM_003354553
- UniProtKB: A0A5G2Q9H6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000073123   ⟸   ENSSSCT00000068806
RefSeq Acc Id: ENSSSCP00000063950   ⟸   ENSSSCT00000069825
RefSeq Acc Id: ENSSSCP00000026774   ⟸   ENSSSCT00000027242
RefSeq Acc Id: ENSSSCP00000060598   ⟸   ENSSSCT00000071842
Protein Domains
C2H2-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000025321 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00025057663 UniProtKB/TrEMBL
  ENSSSCG00030070134 UniProtKB/TrEMBL
  ENSSSCG00035061649 UniProtKB/TrEMBL
  ENSSSCG00040035830 UniProtKB/TrEMBL
  ENSSSCG00050073888 UniProtKB/TrEMBL
  ENSSSCG00055028655 UniProtKB/TrEMBL
  ENSSSCG00060075474 UniProtKB/TrEMBL
  ENSSSCG00065022967 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000027242.3 UniProtKB/TrEMBL
  ENSSSCT00000069825.1 UniProtKB/TrEMBL
  ENSSSCT00000071842 ENTREZGENE
  ENSSSCT00000071842.1 UniProtKB/TrEMBL
  ENSSSCT00025078993.1 UniProtKB/TrEMBL
  ENSSSCT00030098197.1 UniProtKB/TrEMBL
  ENSSSCT00035082866.1 UniProtKB/TrEMBL
  ENSSSCT00040048361.1 UniProtKB/TrEMBL
  ENSSSCT00050101081.1 UniProtKB/TrEMBL
  ENSSSCT00055056917.1 UniProtKB/TrEMBL
  ENSSSCT00060103522.1 UniProtKB/TrEMBL
  ENSSSCT00065030558.1 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
KEGG Report ssc:100622994 UniProtKB/TrEMBL
NCBI Gene MAZ ENTREZGENE
PANTHER GASTRULA ZINC FINGER PROTEIN XLCGF26.1-LIKE-RELATED UniProtKB/TrEMBL
  POZ-, AT HOOK-, AND ZINC FINGER-CONTAINING PROTEIN 1 UniProtKB/TrEMBL
  ZINC FINGER AND BTB DOMAIN-CONTAINING UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/TrEMBL
  zf-C2H2_4 UniProtKB/TrEMBL
  zf-met UniProtKB/TrEMBL
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt A0A5G2Q9H6 ENTREZGENE, UniProtKB/TrEMBL
  A0A5G2R0B5_PIG UniProtKB/TrEMBL
  A0A8D1Y005_PIG UniProtKB/TrEMBL
  I3LRN6_PIG UniProtKB/TrEMBL
VGNC ID VGNC:107150 ENTREZGENE