LRRC8E (leucine rich repeat containing 8 VRAC subunit E)

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Gene: LRRC8E (leucine rich repeat containing 8 VRAC subunit E) Sus scrofa

Analyze

Symbol:

LRRC8E

Name:

leucine rich repeat containing 8 VRAC subunit E

RGD ID:

13918135

Description:

ENCODES a protein that exhibits volume-sensitive anion channel activity (ortholog); INVOLVED IN anion transmembrane transport (ortholog); ASSOCIATED WITH familial hemophagocytic lymphohistiocytosis 5 (ortholog); long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Also known as:

leucine rich repeat containing 8 family member E; volume-regulated anion channel subunit LRRC8E

RGD Orthologs

Human

Mouse

Rat

Chinchilla

Bonobo

Dog

Squirrel

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	71,309,402 - 71,329,422 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	71,309,404 - 71,318,225 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	71,710,888 - 71,718,616 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

familial hemophagocytic lymphohistiocytosis 5 (ISO)

long QT syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

anion transmembrane transport (ISO)

aspartate transmembrane transport (IEA)

cell volume homeostasis (IEA)

cellular response to osmotic stress (IEA)

cyclic-GMP-AMP transmembrane import across plasma membrane (IEA)

inorganic anion transport (IEA)

ion transport (IEA)

Cellular Component

cytoplasm (ISO)

integral component of endoplasmic reticulum membrane (IEA)

integral component of lysosomal membrane (IEA)

integral component of membrane (IEA)

integral component of plasma membrane (IEA)

ion channel complex (IEA)

plasma membrane (IEA)

Molecular Function

protein binding (ISO)

volume-sensitive anion channel activity (IEA,ISO)

References

Genomics

Comparative Map Data

LRRC8E
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	71,309,402 - 71,329,422 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	71,309,404 - 71,318,225 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	71,710,888 - 71,718,616 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LRRC8E
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	19	7,888,505 - 7,902,021 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	19	7,888,510 - 7,902,016 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	19	7,953,390 - 7,966,908 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
GRCh37	19	7,953,395 - 7,966,901 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	7,859,390 - 7,872,907 (+)	NCBI	NCBI36		hg18	NCBI36
Celera	19	7,824,591 - 7,838,110 (+)	NCBI
Cytogenetic Map	19	p13.2	NCBI
HuRef	19	7,623,841 - 7,637,152 (+)	NCBI		HuRef
CHM1_1	19	7,952,868 - 7,966,380 (+)	NCBI		CHM1_1

Lrrc8e
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	4,274,269 - 4,287,470 (+)	NCBI	GRCm39		mm39
GRCm38	8	4,224,268 - 4,237,470 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	4,226,827 - 4,237,470 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	4,226,827 - 4,237,470 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	8	4,226,827 - 4,236,898 (+)	NCBI			mm8
Celera	8	4,416,312 - 4,438,059 (+)	NCBI		Celera
Cytogenetic Map	8	A1.1	NCBI

Lrrc8e
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	12	2,578,240 - 2,589,407 (+)	NCBI
Rnor_6.0 Ensembl	12	2,557,275 - 2,568,382 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	12	2,557,267 - 2,568,416 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	12	4,710,039 - 4,721,300 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	1,554,464 - 1,566,012 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	12	1,554,997 - 1,566,044 (-)	NCBI
Celera	12	4,393,851 - 4,404,933 (+)	NCBI		Celera
Cytogenetic Map	12	p12	NCBI

Lrrc8e
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955563	1,362,266 - 1,370,226 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955563	1,362,266 - 1,370,221 (-)	NCBI	ChiLan1.0	ChiLan1.0

LRRC8E
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	19	8,041,185 - 8,055,684 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	8,041,185 - 8,055,684 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	19	7,189,490 - 7,203,310 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

LRRC8E
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	20	52,588,973 - 52,593,214 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	20	52,585,636 - 52,593,207 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Lrrc8e
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936588	4,873,412 - 4,880,574 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LRRC8E
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	7,337,918 - 7,351,914 (+)	NCBI
ChlSab1.1 Ensembl	6	7,346,243 - 7,351,855 (+)	Ensembl

Lrrc8e
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624828	859,419 - 868,595 (+)	NCBI

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	endocrine system	hemolymphoid system	nervous system	renal system	reproductive system	respiratory system
High
Medium
Low			1			3	1
Below cutoff	8	3		3	2

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003123182	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005661262	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013994699	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021083893	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU928575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSSSCT00000014838 ⟹ ENSSSCP00000014437

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	71,309,402 - 71,329,422 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000053292 ⟹ ENSSSCP00000037480

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	71,309,402 - 71,314,701 (-)	Ensembl

RefSeq Acc Id:

XM_003123182 ⟹ XP_003123230

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	71,310,497 - 71,318,225 (-)	NCBI

Sequence:

show sequence

CCTCCCTGACTCACCCGGCCAGGCCCGGGAACTCTGCGGGAGTCCCGGCCGCTCCGCTCCGCTC
CTGGGGACGCAGGAGTTGGAATCCGCGTCTGGCCCGTGCGGCGGGATGATTCCGGTGGCGGAGT
TCAAACAGTTTGGGGAGCAGCAGCCCGCCTTCAAAGTGCTCAAACCTTGGTGGGACGTACTGGC
CGAGTACCTCACCGTGGCTATGCTCATGATCGGGGTCTTCGGCTGCACCCTCCAGGTGACGCAG
GACAAGATCATCTGCCTGCCTAGCCATGAACTCCGGGAGAACTTATCAGAGGCCCCATGCCAGC
AGCTGCTGCCCCGGGGGGTCTCTGAGCAGATGGGGGGCCTACGGGAGGTGAGCGGCCTCAAGAA
CAACCTGGACCTGCAGCAGTACAGCTTCATTAACCAGCTCTGCTATGAGACGGCTCTCCACTGG
TACGCCAAGTACTTCCCCTACCTGGTCGTCATCCACACGCTCATCTTCATGGTCTGCACCAGCT
TCTGGTTTAAGTTCCCCGGCACCAGCTCCAAGATCGAGCACTTTATCTCCATCCTGGGCAAGTG
TTTTGACTCGCCATGGACCACGCGGGCCCTGTCTGAGGTCTCTGGGGAGAACCATAAGGGCCCC
ACTGCCGCTGCTGCCACCGGTCGGCCAGCAGTGACCGTGGCAGCCACGGCAGGGCCAGGGAAGG
CAGGTGAGGGTGAGAAGGAGAAGGTGCTGGCAGAGCCTGAGAAGGTGGTGACGGAGCCACCAGC
CGTCACCCTGCTGGACAAGAAGGAAGGGGAGCAGGCCAAAGCCCTGTTTGAGAAGGTCAAGAAA
TTCCGCGTGCATGTGGAAGAGGGGGACATCCTGTACACCATGTACATCCGGCAGACGGTGCTCA
AGGTGTGCAAGTTCCTGGCCATCCTGGTCTACAACCTCATCTACGTGGAGAAGATCAGCTTCCT
GGTGGCCTGCAGGGTGGAGACCTCGGAAGTCACGGGCTACGCCAGCTTCTGCTGCAACCACACC
AAGGCCCACCTCTTCTCCAAGCTGGCTTTCTGCTACATCTCCTTCGTGTGCGTGTACGGGATCA
CCTGCCTCTACACGCTCTACTGGCTCTTCCACCGGCCCCTCAAGGAGTACTCCTTCCGGTCTGT
GCGGGAGGAGACGGGCATGGGGGACATCCCTGACGTCAAGAACGACTTCGCCTTCATGCTGCAC
CTCATTGACCAGTATGACTCGCTGTACTCCAAGCGCTTCGCTGTCTTCCTCTCTGAGGTCAGCG
AGAGCCGCCTGAAGCAGCTCAACCTCAACCATGAGTGGACGGCCGAGAAGCTGCGGCAGAAGCT
GCAGCGCAACACCCGGGGCCAGCTCGAGCTGGCCCTCTGCATGCTCCCGGGGCTGCCTGACACG
GTCTTCGAGCTCAGCGAGCTGGAGGCGCTGCGGCTGGAGGCCATCGGTGATATCACCTTCCCCC
CGGGCCTCTCGCAGCTGGTGAACCTGCAGGAGCTCAGCCTGCTCCACTCACCCGCCAGGCTGCC
CTTCTCCTCGCAGATCTTCCTGCGGGACCGCCTGAAGGTCATCCGGGTCAAGTGCGAGGAGCTC
CGTGAGGTGCCCCTCTGGGTTTTCGGGCTGCGTGGCCTGGATGAGCTGCACCTGGAGGGGCTCT
TCCCCCCAGAGCTGGCTCGGGCAGCGACCCTCGAGAGCCTCCGGGAGCTGAAGCAGCTGAAGGT
GCTGTCTCTGCGAAGCAACGCTGGCAAAGTGCCCGCCAGCGTGACCGATGTGGCCGGGCACCTG
CAGCGGCTCAGCCTGCACAACGACGGGGCCCGCCTACTGGCCCTGAACAGCCTCAAGAAGCTGG
CGGTGCTGCGGGAGCTGGAGCTGGTGGCCTGTGGGCTGGAGCGCATCCCGCATGCCATCTTCAG
CCTGGGCGCGCTGCAGGAACTTGATCTCAAGGACAACCACCTGCGGTCCATCGAGGAGATCCTC
AGCTTCCAGCACTGCCGCAAGCTGGTCACCCTGCGGCTGTGGCACAACCAGATCGCCTATGTCC
CTGAGCACGTGCGGAAGCTCCGAGGCCTCGAGCAGCTTTATCTCAGCCACAACAAGCTGGAGAC
ACTGCCCACCCAGCTCGGCATGTGCTCCAGCCTCCGCCTGCTGGACGTCTCCAACAACGGACTA
CGCTCCGTGCCAGCAGAGCTGGGCCTCCTCCAGAACCTGCAGCACCTGGCTCTCTCCTACAACA
CCCTGGAGTTTCTGCCCGACGAGCTCTTCTTCTGCCGCAAGCTGCGGACGTTGCTCCTGGGCTA
CAACCACCTGAGCCAGCTCTCACCCCAGGTGGGGGCCCTCAGGGCCCTGAGCCGCCTGGAACTC
CAGGGCAACCGGCTGGAGGCGCTGCCAGAAGAACTGGGCAACTGTGGGGGGCTCAAGAAGGCAG
GGCTCCTGGTGGAGGACGCCCTTTACGAGGGGCTGCCAGCCGAGGTGCGGGACAAGATGGAGGC
GGAGTGAAGCCAGGGAGGGGCAGGTTGAGGTCCAGGCCTTCCGGATGCTACCACCCCAGAATCT
CTACCATTGTCTTCAAGGGAGGTGGTGAGCAGGCCCGGGCCAGGAGACGAGGAGCAGACATGTC
AGGCTGGTGGAGCCCAGGCAAGATCGTGGGACTGGTTTGTCTGGGAGGCTGTGGATTTGGGGTG
GAACATCCTGGAGGGATTAACTCCGTCATGAGAGTCTCAAACCAAAACCACACCTGTGTCTTTG
GCTGGCTGGCCTGCCCCCAGCCCTGGGCCAGAGCTGCTACTCTACCCCCACCTCCCACCCCCAG
ATATTCTAGCTCAATCAATGCCAATGATGGGGGTGGGGCTCATCCCAATGGGATTTCAACCCTC
TCCCCCTGACCCAGACGACTTCCATCTAGTATTCTCTCCCAAGGAGGGGACACAGACGCAAGGG
ACCAGCTACTCCCGCCCCATAATTTTGATGCTAATCCCCTTTCTATAAGTTGTTTTCTACGGAC
ACGTGAACTCAGACGAATGGTTTTCATATTTGGCTATGCATCAAAAACAATATCCCCAAAACAA
AACATCCCAGGCTCCACCCCTGGAAGACTGACTCAGGAGGTTTGGCTGGAGCCCAGGTACTTGT
CTGTAGATATAAGCATCCCAAGTAATTCTGATGAAGATGGGCCCAGGCCTGTGTGTTGGGAAGT
GCCAACCTTCAGAACAGATCTCTGGATGTCTAAAGCAGGAATTGCAAACTTTTTTTTTTTTTTT
TTTTTTTTGGTCTTTT

hide sequence

RefSeq Acc Id:

XM_005661262 ⟹ XP_005661319

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	71,309,404 - 71,316,655 (-)	NCBI

Sequence:

show sequence

TAGGTCACAACTGCAGCTTGGATCTGATCCCTGGCCCAGGAACTCCATATGCCATAGGGTGAGC
GGGAAAAAAAGGGCAATGAAATGGTCTGGTAGCCATAAGCTCTCTGCCCCAATCCCCCATGAAG
CCTTTCCCCGAGCCCTGCCACCAGCCATGTTCAGACAAAGAGTGGGGCAGGCTTGTTTCTGGGA
AAGCTTAATGGCAGGTTCAGGATGATCAAGATTGAGTCATGGAGACATAATAATAACCCCACGT
CAGTCTCGGATGCTGTTGTGTATACACCTTGCTCTGCGGGAGCCTCTGGGCCATCGGCTGGGGA
CCCTGGGTGTCTCTGCCTTTGGTAGCAGACCTGGGATGGCCAGTGGCAGAGCTTCCACCAGTGT
GAGATGGGTCCTAAAGGATGGCAGGGACTCCTGGGCAAGAAGTTGGTTCCTGCCCATCTGTGGA
GCATTTCTGCTGCAGCCCCAGAGTTCCCATTCTCAGGTGAAGGAGTTGAGCAGTGTCCCTCACA
GGGACAGGGGGCCAGAACTAGAAGAGCAGATGGCTGGCTCCCTGGTCCTGGGTCTCCCCTTGGC
TTAATGTGTATTTGCACTTTGTGCACACTGGTACAGATGTGCACACTCCAGAATGCCCTGAGGA
TGTCCCTTTTGATGGCTCCAATTTGCCCCCCCGGGGGCTGTTGAGCTGCCCTAAATGTGTTTTT
CTATCAGATTCCCCACTGACTGAATCTGTGATGCGCTGGAGCATCTTTACCGGGCTTGTAGTTT
AGGACAGACCGTGATACTGATTGTGAGGGATGGGCCACTGGGTGAGGGATTGTGTGCTCTGTCT
GTGCACCCCCTTGCGTGCGTCTATGCTGGGTGAGTCAGAACCTGAGTCAGGGGGCTCCCCTAGA
CCGGGTGTGGGCAGGTGTGTCCCTGTCCCTTGCGTGCCATCCCCCATAGGGAGGTAGAAGCCTC
TTACAGGATTAAGGGGTGTGGCGGATTACCTGCCTCAGCCTAGTGGGCAGGCCTGCGTCCTATA
TCCCTGCCCCCTCTTCCACCTTTTCCTCACTCCGGAGTAACTCTAAGGCCTTTAAGATTTCGGG
AACCAAAAAGGAAGTCGTGGAGGTGTCAGCAATTGGCTGAGGTGTGGGACAGAGACCAGTTTCC
CCCTGGAGGTGGGTGGGAGGCTGGAGGACCAGCTGGTGGTCCAGATGCCTCCCTTCCTTGTCCA
GCCTGCACCTAGTGACAGGCTACCAGGACAAGCATAGCAGGCTCCAGGAAATCTGGGTGAGAAA
ACAGGGGCTGTGTATTGGGGAGCATGGATGCTGGGCTGGGGGGGGTGATGAGCACCAGCCTAGG
AGCTCCCCACAGAGGCTTAGGGGGCTTGCTGCCTCCCTTTCCTTCCCCCTGCAGCCTTGGGGAG
AAAGGAGGAGGAGGCTCTCCAGCTGCCTGTCTGAGAGGGTGCTGTCCCAGCTCGTGGTCCACGC
CCCCGTGTGACTTGGGCCTGGCTGTCTGTATCTGGAATAATGATACCTTGGTCTAAAATGAAAC
CCAGGGACAGACAGAGTGGGCTGACCGCCCAGGAGCCTGGCAGCCCAGCCCTGTCCCAGTCGTA
GGTGTCACCCTGGCCTCTCTCCCTGTGGGTTTTCTATTTCCCGATCCTCTGCCCCTTGACCCGT
CCTGGCACCCCCCCCCCCGCCACTGCCTCTCAGAACCCAGATCTCTGTTTTCTGCCTCAGATCC
TGGGCACTAGTCCTGCAAGAAATCCAGGTGTCCTAGTCATTGCCACCCCCCACTCCCCTAGGGC
TGACCAGCCTTCAGCTTCGTCACTCCCTGCCCCTGGGGCCCGTAACCAGAGCCAGGCTGCAGCC
GGCTTTTCCGGTTGGAGGTTGGAGGTGGTGCCTGGAGCGCCCCTGAAGGGGGTGGGGGGGCCCA
CGCCCCGGAAGTCCTGAGCCACTGGATTCTCTCTAGCCCAGTGGTGGAGGGAGCCAGGGCTGGC
TGCCTGGATCCCCGTATCTGGAGTCGGAGAAGCAGAGCAAGAGTTTCGGATTGGCATCAAGGGT
GGGAGGAGATGCCTGGGCTCCAGGAGGAGGCCACACTGGCAAGCTGTGGGGTGTGGGCCCCAGG
GACCGCCCCTGCCGAGCTCTGAGAGGGCAAGCAGAGTCAAATGGGGGCAGGGGTCCCAGTGAGC
AGAGTGGCGGGATGATTCCGGTGGCGGAGTTCAAACAGTTTGGGGAGCAGCAGCCCGCCTTCAA
AGTGCTCAAACCTTGGTGGGACGTACTGGCCGAGTACCTCACCGTGGCTATGCTCATGATCGGG
GTCTTCGGCTGCACCCTCCAGGTGACGCAGGACAAGATCATCTGCCTGCCTAGCCATGAACTCC
GGGAGAACTTATCAGAGGCCCCATGCCAGCAGCTGCTGCCCCGGGGGGTCTCTGAGCAGATGGG
GGGCCTACGGGAGGTGAGCGGCCTCAAGAACAACCTGGACCTGCAGCAGTACAGCTTCATTAAC
CAGCTCTGCTATGAGACGGCTCTCCACTGGTACGCCAAGTACTTCCCCTACCTGGTCGTCATCC
ACACGCTCATCTTCATGGTCTGCACCAGCTTCTGGTTTAAGTTCCCCGGCACCAGCTCCAAGAT
CGAGCACTTTATCTCCATCCTGGGCAAGTGTTTTGACTCGCCATGGACCACGCGGGCCCTGTCT
GAGGTCTCTGGGGAGAACCATAAGGGCCCCACTGCCGCTGCTGCCACCGGTCGGCCAGCAGTGA
CCGTGGCAGCCACGGCAGGGCCAGGGAAGGCAGGTGAGGGTGAGAAGGAGAAGGTGCTGGCAGA
GCCTGAGAAGGTGGTGACGGAGCCACCAGCCGTCACCCTGCTGGACAAGAAGGAAGGGGAGCAG
GCCAAAGCCCTGTTTGAGAAGGTCAAGAAATTCCGCGTGCATGTGGAAGAGGGGGACATCCTGT
ACACCATGTACATCCGGCAGACGGTGCTCAAGGTGTGCAAGTTCCTGGCCATCCTGGTCTACAA
CCTCATCTACGTGGAGAAGATCAGCTTCCTGGTGGCCTGCAGGGTGGAGACCTCGGAAGTCACG
GGCTACGCCAGCTTCTGCTGCAACCACACCAAGGCCCACCTCTTCTCCAAGCTGGCTTTCTGCT
ACATCTCCTTCGTGTGCGTGTACGGGATCACCTGCCTCTACACGCTCTACTGGCTCTTCCACCG
GCCCCTCAAGGAGTACTCCTTCCGGTCTGTGCGGGAGGAGACGGGCATGGGGGACATCCCTGAC
GTCAAGAACGACTTCGCCTTCATGCTGCACCTCATTGACCAGTATGACTCGCTGTACTCCAAGC
GCTTCGCTGTCTTCCTCTCTGAGGTCAGCGAGAGCCGCCTGAAGCAGCTCAACCTCAACCATGA
GTGGACGGCCGAGAAGCTGCGGCAGAAGCTGCAGCGCAACACCCGGGGCCAGCTCGAGCTGGCC
CTCTGCATGCTCCCGGGGCTGCCTGACACGGTCTTCGAGCTCAGCGAGCTGGAGGCGCTGCGGC
TGGAGGCCATCGGTGATATCACCTTCCCCCCGGGCCTCTCGCAGCTGGTGAACCTGCAGGAGCT
CAGCCTGCTCCACTCACCCGCCAGGCTGCCCTTCTCCTCGCAGATCTTCCTGCGGGACCGCCTG
AAGGTCATCCGGGTCAAGTGCGAGGAGCTCCGTGAGGTGCCCCTCTGGGTTTTCGGGCTGCGTG
GCCTGGATGAGCTGCACCTGGAGGGGCTCTTCCCCCCAGAGCTGGCTCGGGCAGCGACCCTCGA
GAGCCTCCGGGAGCTGAAGCAGCTGAAGGTGCTGTCTCTGCGAAGCAACGCTGGCAAAGTGCCC
GCCAGCGTGACCGATGTGGCCGGGCACCTGCAGCGGCTCAGCCTGCACAACGACGGGGCCCGCC
TACTGGCCCTGAACAGCCTCAAGAAGCTGGCGGTGCTGCGGGAGCTGGAGCTGGTGGCCTGTGG
GCTGGAGCGCATCCCGCATGCCATCTTCAGCCTGGGCGCGCTGCAGGAACTTGATCTCAAGGAC
AACCACCTGCGGTCCATCGAGGAGATCCTCAGCTTCCAGCACTGCCGCAAGCTGGTCACCCTGC
GGCTGTGGCACAACCAGATCGCCTATGTCCCTGAGCACGTGCGGAAGCTCCGAGGCCTCGAGCA
GCTTTATCTCAGCCACAACAAGCTGGAGACACTGCCCACCCAGCTCGGCATGTGCTCCAGCCTC
CGCCTGCTGGACGTCTCCAACAACGGACTACGCTCCGTGCCAGCAGAGCTGGGCCTCCTCCAGA
ACCTGCAGCACCTGGCTCTCTCCTACAACACCCTGGAGTTTCTGCCCGACGAGCTCTTCTTCTG
CCGCAAGCTGCGGACGTTGCTCCTGGGCTACAACCACCTGAGCCAGCTCTCACCCCAGGTGGGG
GCCCTCAGGGCCCTGAGCCGCCTGGAACTCCAGGGCAACCGGCTGGAGGCGCTGCCAGAAGAAC
TGGGCAACTGTGGGGGGCTCAAGAAGGCAGGGCTCCTGGTGGAGGACGCCCTTTACGAGGGGCT
GCCAGCCGAGGTGCGGGACAAGATGGAGGCGGAGTGAAGCCAGGGAGGGGCAGGTTGAGGTCCA
GGCCTTCCGGATGCTACCACCCCAGAATCTCTACCATTGTCTTCAAGGGAGGTGGTGAGCAGGC
CCGGGCCAGGAGACGAGGAGCAGACATGTCAGGCTGGTGGAGCCCAGGCAAGATCGTGGGACTG
GTTTGTCTGGGAGGCTGTGGATTTGGGGTGGAACATCCTGGAGGGATTAACTCCGTCATGAGAG
TCTCAAACCAAAACCACACCTGTGTCTTTGGCTGGCTGGCCTGCCCCCAGCCCTGGGCCAGAGC
TGCTACTCTACCCCCACCTCCCACCCCCAGATATTCTAGCTCAATCAATGCCAATGATGGGGGT
GGGGCTCATCCCAATGGGATTTCAACCCTCTCCCCCTGACCCAGACGACTTCCATCTAGTATTC
TCTCCCAAGGAGGGGACACAGACGCAAGGGACCAGCTACTCCCGCCCCATAATTTTGATGCTAA
TCCCCTTTCTATAAGTTGTTTTCTACGGACACGTGAACTCAGACGAATGGTTTTCATATTTGGC
TATGCATCAAAAACAATATCCCCAAAACAAAACATCCCAGGCTCCACCCCTGGAAGACTGACTC
AGGAGGTTTGGCTGGAGCCCAGGTACTTGTCTGTAGATATAAGCATCCCAAGTAATTCTGATGA
AGATGGGCCCAGGCCTGTGTGTTGGGAAGTGCCAACCTTCAGAACAGATCTCTGGATGTCTAAA
GCAGGAATTGCAAACTTTTTTTTTTTTTTTTTTTTTTTGGTCTTTTTGGGATCGCACTCGTGCC
ATATGGAAGTTTCCACACTAGGTAGGGGTTGAATTGGAGCTGTAGCCACCAGCCTATGCCACAG
CTGCAGCCACTCAGGATCCAAGCTGTGTCTGCGACCTATACCACAATGCACAGCATCACTGGAT
CCTTAAGCCGCTGAGCAAGGCCAGGGATCAAACCCACAACCTCATGGTTCCTAGTCGGGTTCTT
TAACCATTGAGCCACGACAGGAACTCCGAACTTTTTTTTTTTTTTTTGATCCCTAGACTCTTTG
AGAAATCTGATGAAAGCTGGGTACCTCCTTTCTCAGGAAAATGTTCACACAGATATGTGAAAAG
TTCTGCAAACAACTTCGGACGGGAGCTCCCTGGTGACTCAATGGGTTGAGGGACTGGTGTTGTC
ACTGCTGTGGTTCAGGTTGCTGCTGTGATGTGGTTTGATTCCCTGGCCCCAGGAAGTTCTGCAT
GCCATGGGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACACAAAAACTTTAGGC
AGTCAACAGATTCCCCCAGGTCCCCTAGGGAGCTGTTTATGGACATCCTAAAGATCATGGACCC
CAGGTTAGGAACACCTGTTGTAGGAATTCTCTTGTGGCATAGTGGGTTAAGGATTCAGCATTGT
CACTGCAGTGACAGGTTGCTGATGTGTCACAGGTTCAGTATCTCCTTCAGGGAACTTTCACACA
CTGCAGGTGTGGCAAAAAACAAAACAAAATAAAAAACCCAAACAAACCTGCTGTGGAGGGTACA
TTTTCCTGAGGACAGGCGGGGACTTGGATCTTCAAATGTTCCCTAAGTGGGAGTTCCTGTGGTG
GCGCAGTGGTAACGAACCCGACTAGTATCCATTAGGACGCAGGTTCCATCCCTGGCCTCGCTCA
GTGGGTTAATGGATCTGGTGTTGCTGTGGCTGTGGCATAGGCCGGCAGCTATAACTCCGATTAG
ACCTCTGGCCTGGGAACTTCCATATGCAGGTGCACCCTAAAAAGTCAAAAAAGAGTTCCCTCTG
TGAAGCAGGGTATGCTGTTGGGTGCTTAATAAATAATACTAATTATGAGAA

hide sequence

RefSeq Acc Id:

XM_013994699 ⟹ XP_013850153

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	71,310,497 - 71,314,098 (-)	NCBI

Sequence:

show sequence

GGGGGCGGGGCCTGGGATCCCGGAAGTCTTCCATTATCTCCTCACGGTTCTGGAGGCTGGCGGT
CTGGAATCCAAGTGTTGACAGCGCTGGTTTCTTCCGAAGGCTGTGAGGGAGAATGTGTTCGTTC
CATGCCTCTCTTCTAGATTCTGGTGGCCTGAGGCATTCCTTAGCTTGTAGGTGACGTTTTCCTT
AAATCTTCGTAGCATCTTCGTGTGTCTCTGTCCGAATTTCTCCCTTTTACAAAGCACAAAGTCC
TACTGGGTCAGCACCCACCCCAATGACCTCAACTTGATCACATCAGCTCTGCAAAGACTATTTC
CGAACAAGACAACCATCACAGGTGACGCAGGACAAGATCATCTGCCTGCCTAGCCATGAACTCC
GGGAGAACTTATCAGAGGCCCCATGCCAGCAGCTGCTGCCCCGGGGGGTCTCTGAGCAGATGGG
GGGCCTACGGGAGGTGAGCGGCCTCAAGAACAACCTGGACCTGCAGCAGTACAGCTTCATTAAC
CAGCTCTGCTATGAGACGGCTCTCCACTGGTACGCCAAGTACTTCCCCTACCTGGTCGTCATCC
ACACGCTCATCTTCATGGTCTGCACCAGCTTCTGGTTTAAGTTCCCCGGCACCAGCTCCAAGAT
CGAGCACTTTATCTCCATCCTGGGCAAGTGTTTTGACTCGCCATGGACCACGCGGGCCCTGTCT
GAGGTCTCTGGGGAGAACCATAAGGGCCCCACTGCCGCTGCTGCCACCGGTCGGCCAGCAGTGA
CCGTGGCAGCCACGGCAGGGCCAGGGAAGGCAGGTGAGGGTGAGAAGGAGAAGGTGCTGGCAGA
GCCTGAGAAGGTGGTGACGGAGCCACCAGCCGTCACCCTGCTGGACAAGAAGGAAGGGGAGCAG
GCCAAAGCCCTGTTTGAGAAGGTCAAGAAATTCCGCGTGCATGTGGAAGAGGGGGACATCCTGT
ACACCATGTACATCCGGCAGACGGTGCTCAAGGTGTGCAAGTTCCTGGCCATCCTGGTCTACAA
CCTCATCTACGTGGAGAAGATCAGCTTCCTGGTGGCCTGCAGGGTGGAGACCTCGGAAGTCACG
GGCTACGCCAGCTTCTGCTGCAACCACACCAAGGCCCACCTCTTCTCCAAGCTGGCTTTCTGCT
ACATCTCCTTCGTGTGCGTGTACGGGATCACCTGCCTCTACACGCTCTACTGGCTCTTCCACCG
GCCCCTCAAGGAGTACTCCTTCCGGTCTGTGCGGGAGGAGACGGGCATGGGGGACATCCCTGAC
GTCAAGAACGACTTCGCCTTCATGCTGCACCTCATTGACCAGTATGACTCGCTGTACTCCAAGC
GCTTCGCTGTCTTCCTCTCTGAGGTCAGCGAGAGCCGCCTGAAGCAGCTCAACCTCAACCATGA
GTGGACGGCCGAGAAGCTGCGGCAGAAGCTGCAGCGCAACACCCGGGGCCAGCTCGAGCTGGCC
CTCTGCATGCTCCCGGGGCTGCCTGACACGGTCTTCGAGCTCAGCGAGCTGGAGGCGCTGCGGC
TGGAGGCCATCGGTGATATCACCTTCCCCCCGGGCCTCTCGCAGCTGGTGAACCTGCAGGAGCT
CAGCCTGCTCCACTCACCCGCCAGGCTGCCCTTCTCCTCGCAGATCTTCCTGCGGGACCGCCTG
AAGGTCATCCGGGTCAAGTGCGAGGAGCTCCGTGAGGTGCCCCTCTGGGTTTTCGGGCTGCGTG
GCCTGGATGAGCTGCACCTGGAGGGGCTCTTCCCCCCAGAGCTGGCTCGGGCAGCGACCCTCGA
GAGCCTCCGGGAGCTGAAGCAGCTGAAGGTGCTGTCTCTGCGAAGCAACGCTGGCAAAGTGCCC
GCCAGCGTGACCGATGTGGCCGGGCACCTGCAGCGGCTCAGCCTGCACAACGACGGGGCCCGCC
TACTGGCCCTGAACAGCCTCAAGAAGCTGGCGGTGCTGCGGGAGCTGGAGCTGGTGGCCTGTGG
GCTGGAGCGCATCCCGCATGCCATCTTCAGCCTGGGCGCGCTGCAGGAACTTGATCTCAAGGAC
AACCACCTGCGGTCCATCGAGGAGATCCTCAGCTTCCAGCACTGCCGCAAGCTGGTCACCCTGC
GGCTGTGGCACAACCAGATCGCCTATGTCCCTGAGCACGTGCGGAAGCTCCGAGGCCTCGAGCA
GCTTTATCTCAGCCACAACAAGCTGGAGACACTGCCCACCCAGCTCGGCATGTGCTCCAGCCTC
CGCCTGCTGGACGTCTCCAACAACGGACTACGCTCCGTGCCAGCAGAGCTGGGCCTCCTCCAGA
ACCTGCAGCACCTGGCTCTCTCCTACAACACCCTGGAGTTTCTGCCCGACGAGCTCTTCTTCTG
CCGCAAGCTGCGGACGTTGCTCCTGGGCTACAACCACCTGAGCCAGCTCTCACCCCAGGTGGGG
GCCCTCAGGGCCCTGAGCCGCCTGGAACTCCAGGGCAACCGGCTGGAGGCGCTGCCAGAAGAAC
TGGGCAACTGTGGGGGGCTCAAGAAGGCAGGGCTCCTGGTGGAGGACGCCCTTTACGAGGGGCT
GCCAGCCGAGGTGCGGGACAAGATGGAGGCGGAGTGAAGCCAGGGAGGGGCAGGTTGAGGTCCA
GGCCTTCCGGATGCTACCACCCCAGAATCTCTACCATTGTCTTCAAGGGAGGTGGTGAGCAGGC
CCGGGCCAGGAGACGAGGAGCAGACATGTCAGGCTGGTGGAGCCCAGGCAAGATCGTGGGACTG
GTTTGTCTGGGAGGCTGTGGATTTGGGGTGGAACATCCTGGAGGGATTAACTCCGTCATGAGAG
TCTCAAACCAAAACCACACCTGTGTCTTTGGCTGGCTGGCCTGCCCCCAGCCCTGGGCCAGAGC
TGCTACTCTACCCCCACCTCCCACCCCCAGATATTCTAGCTCAATCAATGCCAATGATGGGGGT
GGGGCTCATCCCAATGGGATTTCAACCCTCTCCCCCTGACCCAGACGACTTCCATCTAGTATTC
TCTCCCAAGGAGGGGACACAGACGCAAGGGACCAGCTACTCCCGCCCCATAATTTTGATGCTAA
TCCCCTTTCTATAAGTTGTTTTCTACGGACACGTGAACTCAGACGAATGGTTTTCATATTTGGC
TATGCATCAAAAACAATATCCCCAAAACAAAACATCCCAGGCTCCACCCCTGGAAGACTGACTC
AGGAGGTTTGGCTGGAGCCCAGGTACTTGTCTGTAGATATAAGCATCCCAAGTAATTCTGATGA
AGATGGGCCCAGGCCTGTGTGTTGGGAAGTGCCAACCTTCAGAACAGATCTCTGGATGTCTAAA
GCAGGAATTGCAAACTTTTTTTTTTTTTTTTTTTTTTTGGTCTTTT

hide sequence

RefSeq Acc Id:

XM_021083893 ⟹ XP_020939552

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	71,310,497 - 71,316,655 (-)	NCBI

Sequence:

show sequence

TAGGTCACAACTGCAGCTTGGATCTGATCCCTGGCCCAGGAACTCCATATGCCATAGGGTGAGC
GGGAAAAAAAGGGCAATGAAATGGTCTGGTAGCCATAAGCTCTCTGCCCCAATCCCCCATGAAG
CCTTTCCCCGAGCCCTGCCACCAGCCATGTTCAGACAAAGAGTGGGGCAGGCTTGTTTCTGGGA
AAGCTTAATGGCAGGTTCAGGATGATCAAGATTGAGTCATGGAGACATAATAATAACCCCACGT
CAGTCTCGGATGCTGTTGTGTATACACCTTGCTCTGCGGGAGCCTCTGGGCCATCGGCTGGGGA
CCCTGGGTGTCTCTGCCTTTGGTAGCAGACCTGGGATGGCCAGTGGCAGAGCTTCCACCAGTGT
GAGATGGGTCCTAAAGGATGGCAGGGACTCCTGGGCAAGAAGTTGGTTCCTGCCCATCTGTGGA
GCATTTCTGCTGCAGCCCCAGAGTTCCCATTCTCAGGTGAAGGAGTTGAGCAGTGTCCCTCACA
GGGACAGGGGGCCAGAACTAGAAGAGCAGATGGCTGGCTCCCTGGTCCTGGGTCTCCCCTTGGC
TTAATGTGTATTTGCACTTTGTGCACACTGGTACAGATGTGCACACTCCAGAATGCCCTGAGGA
TGTCCCTTTTGATGGCTCCAATTTGCCCCCCCGGGGGCTGTTGAGCTGCCCTAAATGTGTTTTT
CTATCAGATTCCCCACTGACTGAATCTGTGATGCGCTGGAGCATCTTTACCGGGCTTGTAGTTT
AGGACAGACCGTGATACTGATTGTGAGGGATGGGCCACTGGGTGAGGGATTGTGTGCTCTGTCT
GTGCACCCCCTTGCGTGCGTCTATGCTGGGTGAGTCAGAACCTGAGTCAGGGGGCTCCCCTAGA
CCGGGTGTGGGCAGGTGTGTCCCTGTCCCTTGCGTGCCATCCCCCATAGGGAGGTAGAAGCCTC
TTACAGGATTAAGGGGTGTGGCGGATTACCTGCCTCAGCCTAGTGGGCAGGCCTGCGTCCTATA
TCCCTGCCCCCTCTTCCACCTTTTCCTCACTCCGGAGTAACTCTAAGGCCTTTAAGATTTCGGG
AACCAAAAAGGAAGTCGTGGAGGTGTCAGCAATTGGCTGAGGTGTGGGACAGAGACCAGTTTCC
CCCTGGAGGTGGGTGGGAGGCTGGAGGACCAGCTGGTGGTCCAGATGCCTCCCTTCCTTGTCCA
GCCTGCACCTAGTGACAGGCTACCAGGACAAGCATAGCAGGCTCCAGGAAATCTGGGTGAGAAA
ACAGGGGCTGTGTATTGGGGAGCATGGATGCTGGGCTGGGGGGGGTGATGAGCACCAGCCTAGG
AGCTCCCCACAGAGGCTTAGGGGGCTTGCTGCCTCCCTTTCCTTCCCCCTGCAGCCTTGGGGAG
AAAGGAGGAGGAGGCTCTCCAGCTGCCTGTCTGAGAGGGTGCTGTCCCAGCTCGTGGTCCACGC
CCCCGTGTGACTTGGGCCTGGCTGTCTGTATCTGGAATAATGATACCTTGGTCTAAAATGAAAC
CCAGGGACAGACAGAGTGGGCTGACCGCCCAGGAGCCTGGCAGCCCAGCCCTGTCCCAGTCGTA
GGTGTCACCCTGGCCTCTCTCCCTGTGGGTTTTCTATTTCCCGATCCTCTGCCCCTTGACCCGT
CCTGGCACCCCCCCCCCCGCCACTGCCTCTCAGAACCCAGATCTCTGTTTTCTGCCTCAGATCC
TGGGCACTAGTCCTGCAAGAAATCCAGGTGTCCTAGTCATTGCCACCCCCCACTCCCCTAGGGC
TGACCAGCCTTCAGCTTCGTCACTCCCTGCCCCTGGGGCCCGTAACCAGAGCCAGGCTGCAGCC
GGCTTTTCCGGTTGGAGGTTGGAGGTGGTGCCTGGAGCGCCCCTGAAGGGGGTGGGGGGGCCCA
CGCCCCGGAAGTCCTGAGCCACTGGATTCTCTCTAGCCCAGTGGTGGAGGGAGCCAGGGCTGGC
TGCCTGGATCCCCGTATCTGGAGTCGGAGAAGCAGAGCAAGAGTTTCGGATTGGCATCAAGGGC
GGGATGATTCCGGTGGCGGAGTTCAAACAGTTTGGGGAGCAGCAGCCCGCCTTCAAAGTGCTCA
AACCTTGGTGGGACGTACTGGCCGAGTACCTCACCGTGGCTATGCTCATGATCGGGGTCTTCGG
CTGCACCCTCCAGGTGACGCAGGACAAGATCATCTGCCTGCCTAGCCATGAACTCCGGGAGAAC
TTATCAGAGGCCCCATGCCAGCAGCTGCTGCCCCGGGGGGTCTCTGAGCAGATGGGGGGCCTAC
GGGAGGTGAGCGGCCTCAAGAACAACCTGGACCTGCAGCAGTACAGCTTCATTAACCAGCTCTG
CTATGAGACGGCTCTCCACTGGTACGCCAAGTACTTCCCCTACCTGGTCGTCATCCACACGCTC
ATCTTCATGGTCTGCACCAGCTTCTGGTTTAAGTTCCCCGGCACCAGCTCCAAGATCGAGCACT
TTATCTCCATCCTGGGCAAGTGTTTTGACTCGCCATGGACCACGCGGGCCCTGTCTGAGGTCTC
TGGGGAGAACCATAAGGGCCCCACTGCCGCTGCTGCCACCGGTCGGCCAGCAGTGACCGTGGCA
GCCACGGCAGGGCCAGGGAAGGCAGGTGAGGGTGAGAAGGAGAAGGTGCTGGCAGAGCCTGAGA
AGGTGGTGACGGAGCCACCAGCCGTCACCCTGCTGGACAAGAAGGAAGGGGAGCAGGCCAAAGC
CCTGTTTGAGAAGGTCAAGAAATTCCGCGTGCATGTGGAAGAGGGGGACATCCTGTACACCATG
TACATCCGGCAGACGGTGCTCAAGGTGTGCAAGTTCCTGGCCATCCTGGTCTACAACCTCATCT
ACGTGGAGAAGATCAGCTTCCTGGTGGCCTGCAGGGTGGAGACCTCGGAAGTCACGGGCTACGC
CAGCTTCTGCTGCAACCACACCAAGGCCCACCTCTTCTCCAAGCTGGCTTTCTGCTACATCTCC
TTCGTGTGCGTGTACGGGATCACCTGCCTCTACACGCTCTACTGGCTCTTCCACCGGCCCCTCA
AGGAGTACTCCTTCCGGTCTGTGCGGGAGGAGACGGGCATGGGGGACATCCCTGACGTCAAGAA
CGACTTCGCCTTCATGCTGCACCTCATTGACCAGTATGACTCGCTGTACTCCAAGCGCTTCGCT
GTCTTCCTCTCTGAGGTCAGCGAGAGCCGCCTGAAGCAGCTCAACCTCAACCATGAGTGGACGG
CCGAGAAGCTGCGGCAGAAGCTGCAGCGCAACACCCGGGGCCAGCTCGAGCTGGCCCTCTGCAT
GCTCCCGGGGCTGCCTGACACGGTCTTCGAGCTCAGCGAGCTGGAGGCGCTGCGGCTGGAGGCC
ATCGGTGATATCACCTTCCCCCCGGGCCTCTCGCAGCTGGTGAACCTGCAGGAGCTCAGCCTGC
TCCACTCACCCGCCAGGCTGCCCTTCTCCTCGCAGATCTTCCTGCGGGACCGCCTGAAGGTCAT
CCGGGTCAAGTGCGAGGAGCTCCGTGAGGTGCCCCTCTGGGTTTTCGGGCTGCGTGGCCTGGAT
GAGCTGCACCTGGAGGGGCTCTTCCCCCCAGAGCTGGCTCGGGCAGCGACCCTCGAGAGCCTCC
GGGAGCTGAAGCAGCTGAAGGTGCTGTCTCTGCGAAGCAACGCTGGCAAAGTGCCCGCCAGCGT
GACCGATGTGGCCGGGCACCTGCAGCGGCTCAGCCTGCACAACGACGGGGCCCGCCTACTGGCC
CTGAACAGCCTCAAGAAGCTGGCGGTGCTGCGGGAGCTGGAGCTGGTGGCCTGTGGGCTGGAGC
GCATCCCGCATGCCATCTTCAGCCTGGGCGCGCTGCAGGAACTTGATCTCAAGGACAACCACCT
GCGGTCCATCGAGGAGATCCTCAGCTTCCAGCACTGCCGCAAGCTGGTCACCCTGCGGCTGTGG
CACAACCAGATCGCCTATGTCCCTGAGCACGTGCGGAAGCTCCGAGGCCTCGAGCAGCTTTATC
TCAGCCACAACAAGCTGGAGACACTGCCCACCCAGCTCGGCATGTGCTCCAGCCTCCGCCTGCT
GGACGTCTCCAACAACGGACTACGCTCCGTGCCAGCAGAGCTGGGCCTCCTCCAGAACCTGCAG
CACCTGGCTCTCTCCTACAACACCCTGGAGTTTCTGCCCGACGAGCTCTTCTTCTGCCGCAAGC
TGCGGACGTTGCTCCTGGGCTACAACCACCTGAGCCAGCTCTCACCCCAGGTGGGGGCCCTCAG
GGCCCTGAGCCGCCTGGAACTCCAGGGCAACCGGCTGGAGGCGCTGCCAGAAGAACTGGGCAAC
TGTGGGGGGCTCAAGAAGGCAGGGCTCCTGGTGGAGGACGCCCTTTACGAGGGGCTGCCAGCCG
AGGTGCGGGACAAGATGGAGGCGGAGTGAAGCCAGGGAGGGGCAGGTTGAGGTCCAGGCCTTCC
GGATGCTACCACCCCAGAATCTCTACCATTGTCTTCAAGGGAGGTGGTGAGCAGGCCCGGGCCA
GGAGACGAGGAGCAGACATGTCAGGCTGGTGGAGCCCAGGCAAGATCGTGGGACTGGTTTGTCT
GGGAGGCTGTGGATTTGGGGTGGAACATCCTGGAGGGATTAACTCCGTCATGAGAGTCTCAAAC
CAAAACCACACCTGTGTCTTTGGCTGGCTGGCCTGCCCCCAGCCCTGGGCCAGAGCTGCTACTC
TACCCCCACCTCCCACCCCCAGATATTCTAGCTCAATCAATGCCAATGATGGGGGTGGGGCTCA
TCCCAATGGGATTTCAACCCTCTCCCCCTGACCCAGACGACTTCCATCTAGTATTCTCTCCCAA
GGAGGGGACACAGACGCAAGGGACCAGCTACTCCCGCCCCATAATTTTGATGCTAATCCCCTTT
CTATAAGTTGTTTTCTACGGACACGTGAACTCAGACGAATGGTTTTCATATTTGGCTATGCATC
AAAAACAATATCCCCAAAACAAAACATCCCAGGCTCCACCCCTGGAAGACTGACTCAGGAGGTT
TGGCTGGAGCCCAGGTACTTGTCTGTAGATATAAGCATCCCAAGTAATTCTGATGAAGATGGGC
CCAGGCCTGTGTGTTGGGAAGTGCCAACCTTCAGAACAGATCTCTGGATGTCTAAAGCAGGAAT
TGCAAACTTTTTTTTTTTTTTTTTTTTTTTGGTCTTTT

hide sequence

Protein Sequences


Protein RefSeqs	XP_003123230	(Get FASTA)	NCBI Sequence Viewer
	XP_005661319	(Get FASTA)	NCBI Sequence Viewer
	XP_013850153	(Get FASTA)	NCBI Sequence Viewer
	XP_020939552	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	XP_005661319 ⟸ XM_005661262
- Peptide Label:	isoform X1
- UniProtKB:	A0A287A0M3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIPVAEFKQFGEQQPAFKVLKPWWDVLAEYLTVAMLMIGVFGCTLQVTQDKIICLPSHELRENL SEAPCQQLLPRGVSEQMGGLREVSGLKNNLDLQQYSFINQLCYETALHWYAKYFPYLVVIHTLI FMVCTSFWFKFPGTSSKIEHFISILGKCFDSPWTTRALSEVSGENHKGPTAAAATGRPAVTVAA TAGPGKAGEGEKEKVLAEPEKVVTEPPAVTLLDKKEGEQAKALFEKVKKFRVHVEEGDILYTMY IRQTVLKVCKFLAILVYNLIYVEKISFLVACRVETSEVTGYASFCCNHTKAHLFSKLAFCYISF VCVYGITCLYTLYWLFHRPLKEYSFRSVREETGMGDIPDVKNDFAFMLHLIDQYDSLYSKRFAV FLSEVSESRLKQLNLNHEWTAEKLRQKLQRNTRGQLELALCMLPGLPDTVFELSELEALRLEAI GDITFPPGLSQLVNLQELSLLHSPARLPFSSQIFLRDRLKVIRVKCEELREVPLWVFGLRGLDE LHLEGLFPPELARAATLESLRELKQLKVLSLRSNAGKVPASVTDVAGHLQRLSLHNDGARLLAL NSLKKLAVLRELELVACGLERIPHAIFSLGALQELDLKDNHLRSIEEILSFQHCRKLVTLRLWH NQIAYVPEHVRKLRGLEQLYLSHNKLETLPTQLGMCSSLRLLDVSNNGLRSVPAELGLLQNLQH LALSYNTLEFLPDELFFCRKLRTLLLGYNHLSQLSPQVGALRALSRLELQGNRLEALPEELGNC GGLKKAGLLVEDALYEGLPAEVRDKMEAE hide sequence

RefSeq Acc Id:	XP_003123230 ⟸ XM_003123182
- Peptide Label:	isoform X1
- UniProtKB:	A0A287A0M3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIPVAEFKQFGEQQPAFKVLKPWWDVLAEYLTVAMLMIGVFGCTLQVTQDKIICLPSHELRENL SEAPCQQLLPRGVSEQMGGLREVSGLKNNLDLQQYSFINQLCYETALHWYAKYFPYLVVIHTLI FMVCTSFWFKFPGTSSKIEHFISILGKCFDSPWTTRALSEVSGENHKGPTAAAATGRPAVTVAA TAGPGKAGEGEKEKVLAEPEKVVTEPPAVTLLDKKEGEQAKALFEKVKKFRVHVEEGDILYTMY IRQTVLKVCKFLAILVYNLIYVEKISFLVACRVETSEVTGYASFCCNHTKAHLFSKLAFCYISF VCVYGITCLYTLYWLFHRPLKEYSFRSVREETGMGDIPDVKNDFAFMLHLIDQYDSLYSKRFAV FLSEVSESRLKQLNLNHEWTAEKLRQKLQRNTRGQLELALCMLPGLPDTVFELSELEALRLEAI GDITFPPGLSQLVNLQELSLLHSPARLPFSSQIFLRDRLKVIRVKCEELREVPLWVFGLRGLDE LHLEGLFPPELARAATLESLRELKQLKVLSLRSNAGKVPASVTDVAGHLQRLSLHNDGARLLAL NSLKKLAVLRELELVACGLERIPHAIFSLGALQELDLKDNHLRSIEEILSFQHCRKLVTLRLWH NQIAYVPEHVRKLRGLEQLYLSHNKLETLPTQLGMCSSLRLLDVSNNGLRSVPAELGLLQNLQH LALSYNTLEFLPDELFFCRKLRTLLLGYNHLSQLSPQVGALRALSRLELQGNRLEALPEELGNC GGLKKAGLLVEDALYEGLPAEVRDKMEAE hide sequence

RefSeq Acc Id:

XP_020939552 ⟸ XM_021083893

- Peptide Label:

isoform X1

- Sequence:

show sequence

MIPVAEFKQFGEQQPAFKVLKPWWDVLAEYLTVAMLMIGVFGCTLQVTQDKIICLPSHELRENL
SEAPCQQLLPRGVSEQMGGLREVSGLKNNLDLQQYSFINQLCYETALHWYAKYFPYLVVIHTLI
FMVCTSFWFKFPGTSSKIEHFISILGKCFDSPWTTRALSEVSGENHKGPTAAAATGRPAVTVAA
TAGPGKAGEGEKEKVLAEPEKVVTEPPAVTLLDKKEGEQAKALFEKVKKFRVHVEEGDILYTMY
IRQTVLKVCKFLAILVYNLIYVEKISFLVACRVETSEVTGYASFCCNHTKAHLFSKLAFCYISF
VCVYGITCLYTLYWLFHRPLKEYSFRSVREETGMGDIPDVKNDFAFMLHLIDQYDSLYSKRFAV
FLSEVSESRLKQLNLNHEWTAEKLRQKLQRNTRGQLELALCMLPGLPDTVFELSELEALRLEAI
GDITFPPGLSQLVNLQELSLLHSPARLPFSSQIFLRDRLKVIRVKCEELREVPLWVFGLRGLDE
LHLEGLFPPELARAATLESLRELKQLKVLSLRSNAGKVPASVTDVAGHLQRLSLHNDGARLLAL
NSLKKLAVLRELELVACGLERIPHAIFSLGALQELDLKDNHLRSIEEILSFQHCRKLVTLRLWH
NQIAYVPEHVRKLRGLEQLYLSHNKLETLPTQLGMCSSLRLLDVSNNGLRSVPAELGLLQNLQH
LALSYNTLEFLPDELFFCRKLRTLLLGYNHLSQLSPQVGALRALSRLELQGNRLEALPEELGNC
GGLKKAGLLVEDALYEGLPAEVRDKMEAE

hide sequence

RefSeq Acc Id:

XP_013850153 ⟸ XM_013994699

- Peptide Label:

isoform X2

- Sequence:

show sequence

MGGLREVSGLKNNLDLQQYSFINQLCYETALHWYAKYFPYLVVIHTLIFMVCTSFWFKFPGTSS
KIEHFISILGKCFDSPWTTRALSEVSGENHKGPTAAAATGRPAVTVAATAGPGKAGEGEKEKVL
AEPEKVVTEPPAVTLLDKKEGEQAKALFEKVKKFRVHVEEGDILYTMYIRQTVLKVCKFLAILV
YNLIYVEKISFLVACRVETSEVTGYASFCCNHTKAHLFSKLAFCYISFVCVYGITCLYTLYWLF
HRPLKEYSFRSVREETGMGDIPDVKNDFAFMLHLIDQYDSLYSKRFAVFLSEVSESRLKQLNLN
HEWTAEKLRQKLQRNTRGQLELALCMLPGLPDTVFELSELEALRLEAIGDITFPPGLSQLVNLQ
ELSLLHSPARLPFSSQIFLRDRLKVIRVKCEELREVPLWVFGLRGLDELHLEGLFPPELARAAT
LESLRELKQLKVLSLRSNAGKVPASVTDVAGHLQRLSLHNDGARLLALNSLKKLAVLRELELVA
CGLERIPHAIFSLGALQELDLKDNHLRSIEEILSFQHCRKLVTLRLWHNQIAYVPEHVRKLRGL
EQLYLSHNKLETLPTQLGMCSSLRLLDVSNNGLRSVPAELGLLQNLQHLALSYNTLEFLPDELF
FCRKLRTLLLGYNHLSQLSPQVGALRALSRLELQGNRLEALPEELGNCGGLKKAGLLVEDALYE
GLPAEVRDKMEAE

hide sequence

RefSeq Acc Id:

ENSSSCP00000037480 ⟸ ENSSSCT00000053292

RefSeq Acc Id:

ENSSSCP00000014437 ⟸ ENSSSCT00000014838

Protein Domains

Pannexin_like

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000013586	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00070025557	UniProtKB/TrEMBL
Ensembl Protein	ENSSSCP00000014437	UniProtKB/TrEMBL
	ENSSSCP00000037480	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCP00070043216	UniProtKB/TrEMBL
	ENSSSCP00070043217	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000014838	UniProtKB/TrEMBL
	ENSSSCT00000053292	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCT00070051098	UniProtKB/TrEMBL
	ENSSSCT00070051099	UniProtKB/TrEMBL
Gene3D-CATH	3.80.10.10	UniProtKB/TrEMBL
InterPro	Leu-rich_rpt	UniProtKB/TrEMBL
	Leu-rich_rpt_typical-subtyp	UniProtKB/TrEMBL
	LRR_dom_sf	UniProtKB/TrEMBL
	LRRC8_Pannexin-like	UniProtKB/TrEMBL
KEGG Report	ssc:100517078	UniProtKB/TrEMBL
NCBI Gene	LRRC8E	ENTREZGENE
Pfam	LRR_8	UniProtKB/TrEMBL
	Pannexin_like	UniProtKB/TrEMBL
PROSITE	LRR	UniProtKB/TrEMBL
SMART	LRR_TYP	UniProtKB/TrEMBL
UniProt	A0A287A0M3	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1VIE5_PIG	UniProtKB/TrEMBL
	A0A4X1VNY2_PIG	UniProtKB/TrEMBL
	F1SA81_PIG	UniProtKB/TrEMBL
VGNC ID	VGNC:98089	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar