FUT2 (fucosyltransferase 2 (H blood group)) - Rat Genome Database

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Gene: FUT2 (fucosyltransferase 2 (H blood group)) Sus scrofa
Analyze
Symbol: FUT2
Name: fucosyltransferase 2 (H blood group) (Ensembl:fucosyltransferase 2)
RGD ID: 13913099
Description: ENCODES a protein that exhibits alpha-(1,2)-fucosyltransferase activity (ortholog); galactoside 2-alpha-L-fucosyltransferase activity (ortholog); INVOLVED IN fucosylation (ortholog); glycolipid metabolic process (ortholog); oligosaccharide biosynthetic process (ortholog); ASSOCIATED WITH Caliciviridae Infections (ortholog); COVID-19 (ortholog); Crohn's disease (ortholog); FOUND IN Golgi apparatus (inferred); Golgi cisterna membrane (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: alpha(1,2)FT 2; alpha-1,2-fucosyltransferase; fucosyltransferase 2; galactoside 2-alpha-L-fucosyltransferase 2; galactoside alpha-(1,2)-fucosyltransferase 2; GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 2; type 1 galactoside alpha-(1,2)-fucosyltransferase FUT2; type 2 galactoside alpha-(1,2)-fucosyltransferase FUT2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl654,034,684 - 54,047,224 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1654,034,666 - 54,044,891 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2649,782,007 - 49,792,235 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap6q11-q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:7592879   PMID:9321466   PMID:11132149   PMID:14681463   PMID:22301074   PMID:26985939   PMID:29892924   PMID:30032202  


Genomics

Comparative Map Data
FUT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl654,034,684 - 54,047,224 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1654,034,666 - 54,044,891 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2649,782,007 - 49,792,235 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap6q11-q21NCBI
FUT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381948,695,971 - 48,705,951 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1948,695,971 - 48,705,951 (+)EnsemblGRCh38hg38GRCh38
GRCh371949,199,228 - 49,209,208 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361953,891,040 - 53,901,019 (+)NCBINCBI36Build 36hg18NCBI36
Build 341953,891,049 - 53,901,019NCBI
Celera1946,065,327 - 46,075,291 (+)NCBICelera
Cytogenetic Map19q13.33NCBI
HuRef1945,578,136 - 45,588,563 (+)NCBIHuRef
CHM1_11949,200,850 - 49,210,957 (+)NCBICHM1_1
T2T-CHM13v2.01951,690,377 - 51,700,359 (+)NCBIT2T-CHM13v2.0
Fut2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39745,298,015 - 45,315,818 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl745,298,015 - 45,315,818 (-)EnsemblGRCm39 Ensembl
GRCm38745,648,591 - 45,666,394 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl745,648,591 - 45,666,394 (-)EnsemblGRCm38mm10GRCm38
MGSCv37752,903,965 - 52,921,678 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36745,516,637 - 45,534,350 (-)NCBIMGSCv36mm8
Celera741,110,141 - 41,128,769 (-)NCBICelera
Cytogenetic Map7B3NCBI
cM Map729.41NCBI
Fut2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81105,256,013 - 105,276,828 (-)NCBIGRCr8
mRatBN7.2196,119,549 - 96,139,567 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl196,119,371 - 96,140,360 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1101,504,993 - 101,524,997 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01109,977,690 - 109,997,695 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01103,268,063 - 103,288,070 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01101,631,633 - 101,651,668 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1101,631,635 - 101,651,668 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01102,710,413 - 102,731,324 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4196,118,530 - 96,137,450 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1196,196,640 - 96,215,561 (-)NCBI
Celera190,373,207 - 90,392,770 (-)NCBICelera
Cytogenetic Map1q22NCBI
Fut2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555591,857,138 - 1,868,315 (-)NCBIChiLan1.0ChiLan1.0
FUT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11107,616,477 - 107,626,968 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1107,136,825 - 107,149,040 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01108,139,035 - 108,151,317 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1108,141,168 - 108,142,187 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11107,805,864 - 107,817,992 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01107,452,993 - 107,465,228 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01108,288,606 - 108,300,731 (-)NCBIUU_Cfam_GSD_1.0
Fut2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248325,199,424 - 5,208,456 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in FUT2
99 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 2 2
Low 6 2 3 5 2 14 1 1 1
Below cutoff 2 1 8 1

Sequence


RefSeq Acc Id: ENSSSCT00000003489   ⟹   ENSSSCP00000003406
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl654,034,684 - 54,047,224 (+)Ensembl
RefSeq Acc Id: NM_214069   ⟹   NP_999234
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1654,034,666 - 54,044,891 (+)NCBI
Sequence:
RefSeq Acc Id: NP_999234   ⟸   NM_214069
- UniProtKB: O19100 (UniProtKB/Swiss-Prot),   Q29044 (UniProtKB/Swiss-Prot),   Q10982 (UniProtKB/Swiss-Prot),   A0A8D0LKM8 (UniProtKB/TrEMBL),   A0A8D0R1G6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000003406   ⟸   ENSSSCT00000003489


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000003145 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSSSCG00005016511 UniProtKB/TrEMBL
  ENSSSCG00015028901 UniProtKB/Swiss-Prot
  ENSSSCG00025017537 UniProtKB/TrEMBL
  ENSSSCG00030052217 UniProtKB/Swiss-Prot
  ENSSSCG00035046820 UniProtKB/Swiss-Prot
  ENSSSCG00040005533 UniProtKB/Swiss-Prot
  ENSSSCG00045016268 UniProtKB/Swiss-Prot
  ENSSSCG00055028807 UniProtKB/Swiss-Prot
  ENSSSCG00065044954 UniProtKB/Swiss-Prot
  ENSSSCG00070027851 UniProtKB/Swiss-Prot
Ensembl Transcript ENSSSCT00000003489 ENTREZGENE
  ENSSSCT00000003489.3 UniProtKB/Swiss-Prot
  ENSSSCT00005025951.1 UniProtKB/TrEMBL
  ENSSSCT00015038280.1 UniProtKB/Swiss-Prot
  ENSSSCT00015038335.1 UniProtKB/Swiss-Prot
  ENSSSCT00025023707.1 UniProtKB/TrEMBL
  ENSSSCT00030072738.1 UniProtKB/Swiss-Prot
  ENSSSCT00035062272.1 UniProtKB/Swiss-Prot
  ENSSSCT00040007308.1 UniProtKB/Swiss-Prot
  ENSSSCT00045027680.1 UniProtKB/Swiss-Prot
  ENSSSCT00055057143.1 UniProtKB/Swiss-Prot
  ENSSSCT00065061497.1 UniProtKB/Swiss-Prot
  ENSSSCT00070055875.1 UniProtKB/Swiss-Prot
InterPro Glyco_trans_11 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report ssc:397139 UniProtKB/Swiss-Prot
NCBI Gene FUT2 ENTREZGENE
PANTHER GALACTOSIDE 2-L-FUCOSYLTRANSFERASE UniProtKB/TrEMBL
  GALACTOSIDE ALPHA-(1,2)-FUCOSYLTRANSFERASE 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11927 UniProtKB/Swiss-Prot
Pfam Glyco_transf_11 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8D0LKM8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0R1G6 ENTREZGENE, UniProtKB/TrEMBL
  FUT2_PIG UniProtKB/Swiss-Prot
  O19100 ENTREZGENE
  Q10982 ENTREZGENE
  Q29044 ENTREZGENE
UniProt Secondary O19100 UniProtKB/Swiss-Prot
  Q29044 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-01-30 FUT2  fucosyltransferase 2 (H blood group)  FUT2  fucosyltransferase 2  Symbol and/or name change 5135510 APPROVED