MRPS27 (mitochondrial ribosomal protein S27)

Gene: MRPS27 (mitochondrial ribosomal protein S27) Sus scrofa

Analyze

Symbol:

MRPS27

Name:

mitochondrial ribosomal protein S27

RGD ID:

13911481

Description:

ENCODES a protein that exhibits mitochondrial ribosome binding (inferred); rRNA binding (inferred); tRNA binding (inferred); INVOLVED IN cell population proliferation (inferred); positive regulation of mitochondrial translation (inferred); ASSOCIATED WITH genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (inferred); mitochondrial small ribosomal subunit (inferred); mitochondrion (inferred); INTERACTS WITH deoxynivalenol

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

28S ribosomal protein S27, mitochondrial

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	48,506,795 - 48,616,869 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	16	48,509,064 - 48,642,571 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	16	52,497,270 - 52,593,611 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Neurodevelopmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

deoxynivalenol (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell population proliferation (IEA)

positive regulation of mitochondrial translation (IEA)

Cellular Component

cytoplasm (IEA)

mitochondrial small ribosomal subunit (IEA)

mitochondrion (IBA,IEA)

nucleolus (IEA)

ribosome (IEA)

Molecular Function

mitochondrial ribosome binding (IEA)

protein binding (ISO)

rRNA binding (IEA)

tRNA binding (IEA)

References

Additional References at PubMed

PMID:14681463	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

MRPS27
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	48,506,795 - 48,616,869 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	16	48,509,064 - 48,642,571 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	16	52,497,270 - 52,593,611 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MRPS27
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	72,219,403 - 72,320,240 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	72,214,953 - 72,321,717 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	71,515,230 - 71,616,067 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	71,551,111 - 71,651,809 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	71,551,110 - 71,651,809	NCBI
Celera	5	67,410,623 - 67,511,470 (-)	NCBI		Celera
Cytogenetic Map	5	q13.2	NCBI
HuRef	5	66,720,806 - 66,821,833 (-)	NCBI		HuRef
CHM1_1	5	70,947,926 - 71,048,759 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	72,700,573 - 72,801,410 (-)	NCBI		T2T-CHM13v2.0

Mrps27
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	99,481,275 - 99,552,070 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	99,481,294 - 99,552,070 (+)	Ensembl		GRCm39 Ensembl
GRCm38	13	99,344,767 - 99,415,562 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	99,344,786 - 99,415,562 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	100,114,741 - 100,185,516 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	100,444,943 - 100,515,718 (+)	NCBI		MGSCv36	mm8
Celera	13	102,996,858 - 103,070,707 (+)	NCBI		Celera
Cytogenetic Map	13	D1	NCBI
cM Map	13	52.83	NCBI

Mrps27
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	32,474,178 - 32,542,741 (+)	NCBI		GRCr8
mRatBN7.2	2	30,740,007 - 30,808,577 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	30,740,033 - 30,808,577 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	37,809,820 - 37,877,993 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	35,904,151 - 35,972,350 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	30,708,382 - 30,776,364 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	29,598,344 - 29,666,711 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	29,598,344 - 29,666,724 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	48,760,336 - 48,828,144 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	30,338,206 - 30,386,438 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	30,258,590 - 30,327,163 (+)	NCBI
Celera	2	26,765,210 - 26,833,053 (+)	NCBI		Celera
Cytogenetic Map	2	q12	NCBI

Mrps27
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955575	1,039,280 - 1,126,890 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955575	1,038,317 - 1,126,923 (-)	NCBI	ChiLan1.0	ChiLan1.0

MRPS27
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	42,993,654 - 43,094,247 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	41,147,282 - 41,247,875 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	42,992,341 - 43,092,816 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	43,591,179 - 43,691,620 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	43,591,087 - 43,692,778 (+)	Ensembl	panpan1.1		panPan2

MRPS27
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	55,263,654 - 55,351,615 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	55,264,752 - 55,352,126 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	52,232,345 - 52,319,980 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	55,780,192 - 55,867,921 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	55,780,193 - 55,867,989 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	52,840,441 - 52,928,112 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	53,607,998 - 53,696,238 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	54,499,234 - 54,586,915 (-)	NCBI		UU_Cfam_GSD_1.0

Mrps27
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	186,604,333 - 186,693,920 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936549	4,165,061 - 4,254,642 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936549	4,165,114 - 4,254,634 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MRPS27
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	4	66,558,466 - 66,658,057 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	4	66,557,778 - 66,658,031 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666049	15,315,159 - 15,414,508 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mrps27
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624905	1,317,726 - 1,427,769 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624905	1,317,720 - 1,427,655 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in MRPS27
2879 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium	1	3	2	4	2	12	1	2	1
Low	9	1	1	1		11	1	1	2
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021076728	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021076729	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000102	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK236584	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK391757	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01037900	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000022648 ⟹ ENSSSCP00000024423

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	48,507,596 - 48,608,286 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000069330 ⟹ ENSSSCP00000073362

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	48,518,620 - 48,608,286 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000073267 ⟹ ENSSSCP00000065391

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	48,581,738 - 48,604,931 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000074364 ⟹ ENSSSCP00000069385

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	48,507,597 - 48,605,100 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000075401 ⟹ ENSSSCP00000070210

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	48,507,597 - 48,597,653 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000080990 ⟹ ENSSSCP00000064301

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	48,506,795 - 48,616,869 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000083816 ⟹ ENSSSCP00000060897

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	48,581,786 - 48,604,931 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000089086 ⟹ ENSSSCP00000060548

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	48,509,071 - 48,605,100 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000093852 ⟹ ENSSSCP00000080721

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	48,507,596 - 48,608,286 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000105856 ⟹ ENSSSCP00000077327

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	48,581,741 - 48,604,931 (-)	Ensembl

RefSeq Acc Id:

XM_021076728 ⟹ XP_020932387

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	16	48,509,064 - 48,642,571 (-)	NCBI

Sequence:

show sequence

CAGCCGCTGTTAACTCCAGAGAGAGTTACAAACATGAGCTCTGGCGTCAGACTGCTGTTCTCAC
GCACTCCCCAGCATTATATCCATGGGCAGGTAATAACTTCTCTGAGCTGCAGTTTCGTCATCTG
CCGAACTGGGGAACAGTCGCACATGGAGTTTTCCTGAGGATTAAATGAGATACTCTATACAAGT
GCTTTGCATACGATCTGACCAGCGAGCTCCCTAACTTCAACTGACACTGTAACGTATGGAACTC
AAGAACAGCTAGATGCAGCCATGGGATTAAGCTCTGGCCAATAACACGAAAAGCTTGCTGGCTC
CCGAATCCAAATACTTCATTTCACAAGTGAGAACATATGCACAACTGCCACGGCCCTAGAAGGA
CTGACAACTGGAATAATAACTAGATGGTAACATGAAGCCTGAACTCTGCAAACTTCACAGAGCT
CCAGATGACTGGAGGTAAAAAGAAAAGACTGAGAGATGCCTGCTGGGATGTAAAGCTCCATTCT
GTCCCATCCCTCCCCTCCTTCATGGCCCGAGACCGCGGATACCTCCGAGAGGGCAGCGGCAGCA
CGTGGAGCCTGAGTCCAAGACCCCGGGCCACACCAAACTCCGCAGCAGCAGAACTTGCTGCGAG
GACCGAAAGGCGGCAGCCATGTTGTCAAGGGCTGCGCCAACTGAGGGAACTGGGGGGGGACGAC
GGAGCGTCGACTCGACTCCACCCCCTCGTCTACCGGCAACCCCCGCGCCGGCATTCCCTTTGGT
ATGCTCCAAGATGGCGTCCTCCATAGTGCGGCGCGGGATCCTGCGGGCGCGGAAAGTGTCGCTG
CCTCAACTCTCCCTGGCAGGTAGAAGATGCCTGCTTTCTGCAGCGTATGTGGACAGCCATAAAT
GGGAAGCAAGAGATAAAGAAGATTGTCACCTCGCGGATCTAGCATCTTTAATGGATAAAACATA
TGAGAGAAAGTTGCCTGTTAGTTCTTTAACAATATCACGGTTTGTGGACAACATTGCATCTCGA
GAAGATATAGACCACGCGGAGTATTATCTTTACAAATTTCGACACAGCCCCAACTGCTGGTACT
TGAGAGATTGGACTATCCACACGTGGATTAGGCAGTGTCTAAAATATGGTGCACAGGACAAAGC
CTTATACACCCTTAAAAATAAGGTCCAATATGGCATTTTCCCAGATAACTATACATTTAACTTA
CTGATGGATTATTTCATAAAGAAAGAAAATTACAAAGATGCTTTATCCGTGGTTTTTGAGATCA
TGATGCAAGAAGCTTTTGAAGTCCCTTCCACCCAGCTCCTCTCCCTCTATGTTTTGTACCACTG
CCTTGCAGAGAAGACAGACTTGAGTTGGGAAGAGGAGAGGAACTTTGGTGCATCCCTGTTACTC
CCAGGTCTAAAGCAAAAGAACTCAGTGGGGCTGAGTTCCCAGCTGTATGGCTATGCACTTCTTG
GGAAGGTAGAATTGCAGCAAGGGCTGAGGGCTGTGTACTGCAACATGCCGCTGCTCTGGCAACC
AGGCTACCTCCACAGAGCCCTTCAAGTGATGGAGAAGGTGGCCTCCTCCCCAGAAGATGGACAG
CTGTGTGGAGAAGCGCTCGATGTGCTGGACAGAGTGCTGAAGGCTGTGACTGCTCCGGCCCAGG
GGACTTCAGAGGAACAGCCCCAGGAAGGTGAGGAAAGCCAGAGGTCAGAAGAACTGGTAGAGCA
GTTGGATGTGGAGGAAACTGAACAGTCCAAGCTTCCTCAGTACCTGGAACGATTTGAGGCTTTA
CGTTCTAAGCTGCAGGCTCTGGGCAAAGTGGAGTCAGAAAGCCTGCTGACCCTGAGCACCCAGC
TCGCCAAGGCCCAGCTCCCCACCTGTGAAGCGGAAGACATCGCCGTCTATGAGCAGAGGCTGCA
GCAGTGGCACGGGGAGCGCGTACGTTTGATCCAGAGAGAACAAGAGCAGAGGGAGAGGGCGAGG
CAGGATTACGAGGCTCGGAGAGCAGCCAAGGCATCTGCCTAACCAGGCCGCTCGGGGACCCCAG
GACCCTCACCAGACCTGCTGCAGGATTCATAGTCACTCAGCTGCCTCCTTTTCTTGAAGCGGAG
CACCTGTGGTGTACAGGCCATGCTGTCCCACCTGTCCAGCCACTGTGACCACCCACCCAGATGC
CAAGAAGGCTGTGGACCCATCGGAAGTGGCCAGTAGTCAGTCTGAAGCTACCAGCTAAATACCC
TAAGTAAGGGCTCTCAAGGCTTCTGGTGGAGTTCCTGGGGGACAGGAATCAATTTTGAACTTGG
AAAGTCCCTAATCCTTAGCAATGATGATGCCGTGGTTGAAGAATCAGGTCTTAAGCACAAGCTT
TGGAATGGTTTCTGTCCCCAGCCCAGACCCGCTGCACATCCTGAGATCTCGTCCCCTCAGTCTC
CTCTTCTGCACAAGCTCTCGGCCCAAGCGGGTTGGGGGTGCCCACACACCCTCTTGCCCCTCTT
CCTGCGTCTTCCCCTTCCTGAACTGACCTGTGGGAAGTTCGGTGCAGGAGCAAACATAAGGCCT
GCTGGCTTTTGAATTTCAGGGGGGCCCCAGTGGCATTTTGAGAATGCAGGGGCTTCTGAGGAGA
GACTTTGGCCTGGCTTTCCCATCATGTTGGGATAACTTTTATACCAAGCGTTGTCTCAGCTTCT
CATCAGTCAGGTCAAGGAGCCTTCCGTGTATCCACATGTACACACATACAACTTGTCAACACAA
GTTCCAGTTAGAAGTTGGAGAAAATGAGGGATGGGGTGGGGCTTGCAGTGCAGAGGAGAGATGC
ATGATTGTGAAACCGTCTGGAGGCGCAGAACTCCCCTCTGACGTTTCCCTGTAATGTTGCCCTT
AGGTGTAGTGGTGTATTTCTACACAGCGTTGAGCTCTTTTATCAAGAACCTGTGGAAATAAATG
TTCTGGGATCATC

hide sequence

RefSeq Acc Id:

XM_021076729 ⟹ XP_020932388

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	16	48,509,064 - 48,604,968 (-)	NCBI

Sequence:

show sequence

GTCTACCGGCAACCCCCGCGCCGGCATTCCCTTTGGTATGCTCCAAGATGGCGTCCTCCATAGT
GCGGCGCGGGATCCTGCGGGCGCGGAAAGTGTCGCTGCCTCAACTCTCCCTGGCAGGTAGAAGA
TGCCTGCTTTCTGCAGCGTATGTGGACAGCCATAAATGGGAAGCAAGAGATAAAGAAGATTGTC
ACCTCGCGGATCTAGCATCTTTAATGGATAAAACATATGAGAGAAAGTTGCCTGTTAGTTCTTT
AACAATATCACGGTTTGTGGACAACATTGCATCTCGAGAAGATATAGACCACGCGGAGTATTAT
CTTTACAAGAAGGGTTCCTGCTGGTCCAGCAGCTCACAGAATCGTTCCAGATTTCGACACAGCC
CCAACTGCTGGTACTTGAGAGATTGGACTATCCACACGTGGATTAGGCAGTGTCTAAAATATGG
TGCACAGGACAAAGCCTTATACACCCTTAAAAATAAGGTCCAATATGGCATTTTCCCAGATAAC
TATACATTTAACTTACTGATGGATTATTTCATAAAGAAAGAAAATTACAAAGATGCTTTATCCG
TGGTTTTTGAGATCATGATGCAAGAAGCTTTTGAAGTCCCTTCCACCCAGCTCCTCTCCCTCTA
TGTTTTGTACCACTGCCTTGCAGAGAAGACAGACTTGAGTTGGGAAGAGGAGAGGAACTTTGGT
GCATCCCTGTTACTCCCAGGTCTAAAGCAAAAGAACTCAGTGGGGCTGAGTTCCCAGCTGTATG
GCTATGCACTTCTTGGGAAGGTAGAATTGCAGCAAGGGCTGAGGGCTGTGTACTGCAACATGCC
GCTGCTCTGGCAACCAGGCTACCTCCACAGAGCCCTTCAAGTGATGGAGAAGGTGGCCTCCTCC
CCAGAAGATGGACAGCTGTGTGGAGAAGCGCTCGATGTGCTGGACAGAGTGCTGAAGGCTGTGA
CTGCTCCGGCCCAGGGGACTTCAGAGGAACAGCCCCAGGAAGGTGAGGAAAGCCAGAGGTCAGA
AGAACTGGTAGAGCAGTTGGATGTGGAGGAAACTGAACAGTCCAAGCTTCCTCAGTACCTGGAA
CGATTTGAGGCTTTACGTTCTAAGCTGCAGGCTCTGGGCAAAGTGGAGTCAGAAAGCCTGCTGA
CCCTGAGCACCCAGCTCGCCAAGGCCCAGCTCCCCACCTGTGAAGCGGAAGACATCGCCGTCTA
TGAGCAGAGGCTGCAGCAGTGGCACGGGGAGCGCGTACGTTTGATCCAGAGAGAACAAGAGCAG
AGGGAGAGGGCGAGGCAGGATTACGAGGCTCGGAGAGCAGCCAAGGCATCTGCCTAACCAGGCC
GCTCGGGGACCCCAGGACCCTCACCAGACCTGCTGCAGGATTCATAGTCACTCAGCTGCCTCCT
TTTCTTGAAGCGGAGCACCTGTGGTGTACAGGCCATGCTGTCCCACCTGTCCAGCCACTGTGAC
CACCCACCCAGATGCCAAGAAGGCTGTGGACCCATCGGAAGTGGCCAGTAGTCAGTCTGAAGCT
ACCAGCTAAATACCCTAAGTAAGGGCTCTCAAGGCTTCTGGTGGAGTTCCTGGGGGACAGGAAT
CAATTTTGAACTTGGAAAGTCCCTAATCCTTAGCAATGATGATGCCGTGGTTGAAGAATCAGGT
CTTAAGCACAAGCTTTGGAATGGTTTCTGTCCCCAGCCCAGACCCGCTGCACATCCTGAGATCT
CGTCCCCTCAGTCTCCTCTTCTGCACAAGCTCTCGGCCCAAGCGGGTTGGGGGTGCCCACACAC
CCTCTTGCCCCTCTTCCTGCGTCTTCCCCTTCCTGAACTGACCTGTGGGAAGTTCGGTGCAGGA
GCAAACATAAGGCCTGCTGGCTTTTGAATTTCAGGGGGGCCCCAGTGGCATTTTGAGAATGCAG
GGGCTTCTGAGGAGAGACTTTGGCCTGGCTTTCCCATCATGTTGGGATAACTTTTATACCAAGC
GTTGTCTCAGCTTCTCATCAGTCAGGTCAAGGAGCCTTCCGTGTATCCACATGTACACACATAC
AACTTGTCAACACAAGTTCCAGTTAGAAGTTGGAGAAAATGAGGGATGGGGTGGGGCTTGCAGT
GCAGAGGAGAGATGCATGATTGTGAAACCGTCTGGAGGCGCAGAACTCCCCTCTGACGTTTCCC
TGTAATGTTGCCCTTAGGTGTAGTGGTGTATTTCTACACAGCGTTGAGCTCTTTTATCAAGAAC
CTGTGGAAATAAATGTTCTGGGATCATC

hide sequence

Protein Sequences


Protein RefSeqs	XP_020932387	(Get FASTA)	NCBI Sequence Viewer
	XP_020932388	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000024423
	ENSSSCP00000024423.4
	ENSSSCP00000060548
	ENSSSCP00000060548.1
	ENSSSCP00000064301.1
	ENSSSCP00000065391.1
	ENSSSCP00000069385.2
	ENSSSCP00000070210.1
	ENSSSCP00000073362.2
	ENSSSCP00000077327.1
	ENSSSCP00000080721.1
	ENSSSCP00005007124.1
	ENSSSCP00005007143.1
	ENSSSCP00005007156.1
	ENSSSCP00005007176.1
	ENSSSCP00005007187.1
	ENSSSCP00005007199.1
	ENSSSCP00015019427.1
	ENSSSCP00025024666.1
	ENSSSCP00025024842.1
	ENSSSCP00025025007.1
	ENSSSCP00025025229.1
	ENSSSCP00030032836.1
	ENSSSCP00030032847.1
	ENSSSCP00030032876.1
	ENSSSCP00035026487.1
	ENSSSCP00035026488.1
	ENSSSCP00035026489.1
	ENSSSCP00035026492.1
	ENSSSCP00040016877.1
	ENSSSCP00040016913.1
	ENSSSCP00040016938.1
	ENSSSCP00040017001.1
	ENSSSCP00045031065.1
	ENSSSCP00045031188.1
	ENSSSCP00045031332.1
	ENSSSCP00045031459.1
	ENSSSCP00045031668.1
	ENSSSCP00045031798.1
	ENSSSCP00045031882.1
	ENSSSCP00050037111.1
	ENSSSCP00050037115.1
	ENSSSCP00050037122.1
	ENSSSCP00050037129.1
	ENSSSCP00055040944.1
	ENSSSCP00055041064.1
	ENSSSCP00055041176.1
	ENSSSCP00055041323.1
	ENSSSCP00060019171.1
	ENSSSCP00060019179.1
	ENSSSCP00060019187.1
	ENSSSCP00065043827.1
	ENSSSCP00065043863.1
	ENSSSCP00065043889.1
	ENSSSCP00065043925.1
	ENSSSCP00070027118.1
	ENSSSCP00070027124.1
	ENSSSCP00070027130.1
	ENSSSCP00070027136.1
	ENSSSCP00070027142.1

RefSeq Acc Id:	XP_020932387 ⟸ XM_021076728
- Peptide Label:	isoform X1
- UniProtKB:	A0A4X1UGK4 (UniProtKB/TrEMBL), A0A8D1A485 (UniProtKB/TrEMBL), A0A8D0I6N3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLSRAAPTEGTGGGRRSVDSTPPPRLPATPAPAFPLVCSKMASSIVRRGILRARKVSLPQLSLA GRRCLLSAAYVDSHKWEARDKEDCHLADLASLMDKTYERKLPVSSLTISRFVDNIASREDIDHA EYYLYKFRHSPNCWYLRDWTIHTWIRQCLKYGAQDKALYTLKNKVQYGIFPDNYTFNLLMDYFI KKENYKDALSVVFEIMMQEAFEVPSTQLLSLYVLYHCLAEKTDLSWEEERNFGASLLLPGLKQK NSVGLSSQLYGYALLGKVELQQGLRAVYCNMPLLWQPGYLHRALQVMEKVASSPEDGQLCGEAL DVLDRVLKAVTAPAQGTSEEQPQEGEESQRSEELVEQLDVEETEQSKLPQYLERFEALRSKLQA LGKVESESLLTLSTQLAKAQLPTCEAEDIAVYEQRLQQWHGERVRLIQREQEQRERARQDYEAR RAAKASA hide sequence

RefSeq Acc Id:	XP_020932388 ⟸ XM_021076729
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D1IHI1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASSIVRRGILRARKVSLPQLSLAGRRCLLSAAYVDSHKWEARDKEDCHLADLASLMDKTYERK LPVSSLTISRFVDNIASREDIDHAEYYLYKKGSCWSSSSQNRSRFRHSPNCWYLRDWTIHTWIR QCLKYGAQDKALYTLKNKVQYGIFPDNYTFNLLMDYFIKKENYKDALSVVFEIMMQEAFEVPST QLLSLYVLYHCLAEKTDLSWEEERNFGASLLLPGLKQKNSVGLSSQLYGYALLGKVELQQGLRA VYCNMPLLWQPGYLHRALQVMEKVASSPEDGQLCGEALDVLDRVLKAVTAPAQGTSEEQPQEGE ESQRSEELVEQLDVEETEQSKLPQYLERFEALRSKLQALGKVESESLLTLSTQLAKAQLPTCEA EDIAVYEQRLQQWHGERVRLIQREQEQRERARQDYEARRAAKASA hide sequence

RefSeq Acc Id:

ENSSSCP00000069385 ⟸ ENSSSCT00000074364

RefSeq Acc Id:

ENSSSCP00000060897 ⟸ ENSSSCT00000083816

RefSeq Acc Id:

ENSSSCP00000060548 ⟸ ENSSSCT00000089086

RefSeq Acc Id:

ENSSSCP00000064301 ⟸ ENSSSCT00000080990

RefSeq Acc Id:

ENSSSCP00000070210 ⟸ ENSSSCT00000075401

RefSeq Acc Id:

ENSSSCP00000073362 ⟸ ENSSSCT00000069330

RefSeq Acc Id:

ENSSSCP00000024423 ⟸ ENSSSCT00000022648

RefSeq Acc Id:

ENSSSCP00000065391 ⟸ ENSSSCT00000073267

RefSeq Acc Id:

ENSSSCP00000080721 ⟸ ENSSSCT00000093852

RefSeq Acc Id:

ENSSSCP00000077327 ⟸ ENSSSCT00000105856

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000023818	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005007349	UniProtKB/TrEMBL
	ENSSSCG00015035857	UniProtKB/TrEMBL
	ENSSSCG00025042819	UniProtKB/TrEMBL
	ENSSSCG00030051572	UniProtKB/TrEMBL
	ENSSSCG00035049043	UniProtKB/TrEMBL
	ENSSSCG00040029811	UniProtKB/TrEMBL
	ENSSSCG00045026192	UniProtKB/TrEMBL
	ENSSSCG00050063501	UniProtKB/TrEMBL
	ENSSSCG00055025717	UniProtKB/TrEMBL
	ENSSSCG00060033090	UniProtKB/TrEMBL
	ENSSSCG00065072556	UniProtKB/TrEMBL
	ENSSSCG00070016428	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000022648	ENTREZGENE
	ENSSSCT00000022648.4	UniProtKB/TrEMBL
	ENSSSCT00000069330.2	UniProtKB/TrEMBL
	ENSSSCT00000073267.1	UniProtKB/TrEMBL
	ENSSSCT00000074364.2	UniProtKB/TrEMBL
	ENSSSCT00000075401.2	UniProtKB/TrEMBL
	ENSSSCT00000080990.2	UniProtKB/TrEMBL
	ENSSSCT00000089086	ENTREZGENE
	ENSSSCT00000089086.2	UniProtKB/TrEMBL
	ENSSSCT00000093852.1	UniProtKB/TrEMBL
	ENSSSCT00000105856.1	UniProtKB/TrEMBL
	ENSSSCT00005012169.1	UniProtKB/TrEMBL
	ENSSSCT00005012204.1	UniProtKB/TrEMBL
	ENSSSCT00005012230.1	UniProtKB/TrEMBL
	ENSSSCT00005012259.1	UniProtKB/TrEMBL
	ENSSSCT00005012276.1	UniProtKB/TrEMBL
	ENSSSCT00005012290.1	UniProtKB/TrEMBL
	ENSSSCT00015048789.1	UniProtKB/TrEMBL
	ENSSSCT00025058293.1	UniProtKB/TrEMBL
	ENSSSCT00025058656.1	UniProtKB/TrEMBL
	ENSSSCT00025058992.1	UniProtKB/TrEMBL
	ENSSSCT00025059476.1	UniProtKB/TrEMBL
	ENSSSCT00030072013.1	UniProtKB/TrEMBL
	ENSSSCT00030072039.1	UniProtKB/TrEMBL
	ENSSSCT00030072097.1	UniProtKB/TrEMBL
	ENSSSCT00035065356.1	UniProtKB/TrEMBL
	ENSSSCT00035065360.1	UniProtKB/TrEMBL
	ENSSSCT00035065364.1	UniProtKB/TrEMBL
	ENSSSCT00035065374.1	UniProtKB/TrEMBL
	ENSSSCT00040040222.1	UniProtKB/TrEMBL
	ENSSSCT00040040299.1	UniProtKB/TrEMBL
	ENSSSCT00040040362.1	UniProtKB/TrEMBL
	ENSSSCT00040040558.1	UniProtKB/TrEMBL
	ENSSSCT00045044775.1	UniProtKB/TrEMBL
	ENSSSCT00045044952.1	UniProtKB/TrEMBL
	ENSSSCT00045045176.1	UniProtKB/TrEMBL
	ENSSSCT00045045348.1	UniProtKB/TrEMBL
	ENSSSCT00045045642.1	UniProtKB/TrEMBL
	ENSSSCT00045045815.1	UniProtKB/TrEMBL
	ENSSSCT00045045930.1	UniProtKB/TrEMBL
	ENSSSCT00050086485.1	UniProtKB/TrEMBL
	ENSSSCT00050086491.1	UniProtKB/TrEMBL
	ENSSSCT00050086502.1	UniProtKB/TrEMBL
	ENSSSCT00050086518.1	UniProtKB/TrEMBL
	ENSSSCT00055051213.1	UniProtKB/TrEMBL
	ENSSSCT00055051366.1	UniProtKB/TrEMBL
	ENSSSCT00055051522.1	UniProtKB/TrEMBL
	ENSSSCT00055051715.1	UniProtKB/TrEMBL
	ENSSSCT00060044862.1	UniProtKB/TrEMBL
	ENSSSCT00060044873.1	UniProtKB/TrEMBL
	ENSSSCT00060044884.1	UniProtKB/TrEMBL
	ENSSSCT00065099843.1	UniProtKB/TrEMBL
	ENSSSCT00065099903.1	UniProtKB/TrEMBL
	ENSSSCT00065099943.1	UniProtKB/TrEMBL
	ENSSSCT00065100019.1	UniProtKB/TrEMBL
	ENSSSCT00070032488.1	UniProtKB/TrEMBL
	ENSSSCT00070032495.1	UniProtKB/TrEMBL
	ENSSSCT00070032501.1	UniProtKB/TrEMBL
	ENSSSCT00070032509.1	UniProtKB/TrEMBL
	ENSSSCT00070032515.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.10	UniProtKB/TrEMBL
InterPro	MRPS27	UniProtKB/TrEMBL
	MRPS27/PTCD2	UniProtKB/TrEMBL
	Pentatricopeptide_repeat	UniProtKB/TrEMBL
	TPR-like_helical_dom_sf	UniProtKB/TrEMBL
NCBI Gene	MRPS27	ENTREZGENE
PANTHER	28S RIBOSOMAL PROTEIN S27, MITOCHONDRIAL	UniProtKB/TrEMBL
	PTHR21393	UniProtKB/TrEMBL
Pfam	MRP-S27	UniProtKB/TrEMBL
PROSITE	PPR	UniProtKB/TrEMBL
UniProt	A0A480PJR1_PIG	UniProtKB/TrEMBL
	A0A4X1UDK4_PIG	UniProtKB/TrEMBL
	A0A4X1UG50_PIG	UniProtKB/TrEMBL
	A0A4X1UGK4	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1UGL1_PIG	UniProtKB/TrEMBL
	A0A5G2QLE7_PIG	UniProtKB/TrEMBL
	A0A5G2QQJ0_PIG	UniProtKB/TrEMBL
	A0A5G2R1I0_PIG	UniProtKB/TrEMBL
	A0A5G2R5D6_PIG	UniProtKB/TrEMBL
	A0A5G2RF50_PIG	UniProtKB/TrEMBL
	A0A8D0I6N3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0IDI7_PIG	UniProtKB/TrEMBL
	A0A8D0X5V4_PIG	UniProtKB/TrEMBL
	A0A8D1A485	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1A6C6_PIG	UniProtKB/TrEMBL
	A0A8D1IBQ7_PIG	UniProtKB/TrEMBL
	A0A8D1IBT9_PIG	UniProtKB/TrEMBL
	A0A8D1IDY5_PIG	UniProtKB/TrEMBL
	A0A8D1IHI1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8W4FEP5_PIG	UniProtKB/TrEMBL
	A0A8W4FMK2_PIG	UniProtKB/TrEMBL
	I3LK09_PIG	UniProtKB/TrEMBL
UniProt Secondary	A0A4X1UDJ4	UniProtKB/TrEMBL
	A0A5G2QIN4	UniProtKB/TrEMBL
VGNC ID	VGNC:110668	ENTREZGENE

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InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar