LOC110258909 (isopentenyl-diphosphate Delta-isomerase 1-like) - Rat Genome Database

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Gene: LOC110258909 (isopentenyl-diphosphate Delta-isomerase 1-like) Sus scrofa
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Symbol: LOC110258909
Name: isopentenyl-diphosphate Delta-isomerase 1-like
RGD ID: 13909223
Description: ENCODES a protein that exhibits isopentenyl-diphosphate delta-isomerase activity (ortholog); INVOLVED IN isopentenyl diphosphate metabolic process (ortholog); isoprenoid biosynthetic process (ortholog); negative regulation of cholesterol biosynthetic process (ortholog); FOUND IN intracellular membrane-bounded organelle (ortholog); peroxisome (ortholog)
Type: pseudo
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Squirrel
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position: No map positions available.


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
LOC110258909
(Sus scrofa - pig)
No map positions available.
IDI2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl101,018,910 - 1,025,859 (-)EnsemblGRCh38hg38GRCh38
GRCh38101,018,910 - 1,025,859 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37101,064,850 - 1,071,799 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36101,054,847 - 1,061,799 (-)NCBINCBI36hg18NCBI36
Build 34101,054,846 - 1,061,799NCBI
Celera101,015,125 - 1,022,085 (-)NCBI
Cytogenetic Map10p15.3NCBI
HuRef101,004,316 - 1,011,280 (-)NCBIHuRef
CHM1_1101,064,005 - 1,070,958 (-)NCBICHM1_1
Idi2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39139,002,899 - 9,010,971 (+)NCBIGRCm39mm39
GRCm39 Ensembl139,002,899 - 9,010,981 (+)Ensembl
GRCm38138,952,863 - 8,960,935 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl138,952,863 - 8,960,945 (+)EnsemblGRCm38mm10GRCm38
MGSCv37138,952,109 - 8,960,181 (+)NCBIGRCm37mm9NCBIm37
MGSCv36138,952,109 - 8,960,181 (+)NCBImm8
MGSCv36138,882,858 - 8,889,698 (+)NCBImm8
Celera138,898,570 - 8,935,208 (+)NCBICelera
Cytogenetic Map13A1NCBI
Idi2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21761,331,669 - 61,334,285 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1761,331,669 - 61,334,285 (-)Ensembl
Rnor_6.01763,107,152 - 63,107,469 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01759,623,815 - 59,625,531 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41772,124,491 - 72,127,107 (-)NCBIRGSC3.4rn4RGSC3.4
Cytogenetic Map17q12.1NCBI
IDI2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1101,102,655 - 1,108,261 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl101,102,655 - 1,108,246 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0101,056,280 - 1,062,070 (-)NCBIMhudiblu_PPA_v0panPan3
Idi2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934436,921,702 - 36,927,150 (+)NCBI
SpeTri2.0NW_00493648413,086,928 - 13,092,291 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_002341272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene LOC110258909 ENTREZGENE