COL16A1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 6 | 88,177,816 - 88,242,747 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 88,177,798 - 88,243,718 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 81,892,912 - 81,907,259 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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COL16A1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 1 | 31,652,263 - 31,704,017 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 31,652,263 - 31,704,319 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 32,117,864 - 32,169,618 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 31,890,435 - 31,942,355 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 31,786,940 - 31,838,742 | NCBI | | | | | Celera | 1 | 30,387,074 - 30,438,996 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | p35.2 | NCBI | | | | | HuRef | 1 | 30,235,356 - 30,287,265 (-) | NCBI | | HuRef | | | CHM1_1 | 1 | 32,233,644 - 32,285,563 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 31,509,912 - 31,561,650 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Col16a1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 4 | 129,941,638 - 129,993,070 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 129,941,633 - 129,993,076 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 130,047,817 - 130,099,277 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 130,047,840 - 130,099,283 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 129,725,084 - 129,776,521 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 129,550,192 - 129,601,579 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 128,382,547 - 128,433,748 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | D2.2 | NCBI | | | | | cM Map | 4 | 63.43 | NCBI | | | | |
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Col16a1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 5 | 147,672,559 - 147,727,007 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 142,388,376 - 142,442,825 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 142,388,426 - 142,442,825 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 145,090,038 - 145,143,416 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 146,859,856 - 146,913,228 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 146,857,442 - 146,911,004 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 148,257,030 - 148,311,645 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 148,257,642 - 148,311,645 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 151,976,106 - 152,030,103 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 149,072,905 - 149,126,350 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 5 | 149,069,555 - 149,136,389 (+) | NCBI | | | | | Celera | 5 | 140,857,544 - 140,910,551 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | q36 | NCBI | | | | |
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Col16a1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955452 | 10,062,562 - 10,103,064 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955452 | 10,062,409 - 10,111,778 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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COL16A1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 1 | 195,125,387 - 195,177,191 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 194,247,339 - 194,298,860 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 30,936,368 - 30,987,855 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 31,953,426 - 32,005,429 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
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COL16A1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 2 | 69,410,283 - 69,459,382 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 2 | 69,410,155 - 69,459,335 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 2 | 65,989,263 - 66,038,324 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 2 | 69,975,306 - 70,024,416 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 2 | 69,975,330 - 70,024,420 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 2 | 66,811,227 - 66,860,204 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 2 | 67,807,606 - 67,856,617 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 2 | 68,806,911 - 68,855,998 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Col16a1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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COL16A1 (Chlorocebus sabaeus - green monkey) |
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Col16a1 (Heterocephalus glaber - naked mole-rat) |
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