VIPR1 (vasoactive intestinal peptide receptor 1) - Rat Genome Database
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Gene: VIPR1 (vasoactive intestinal peptide receptor 1) Sus scrofa
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Symbol: VIPR1
Name: vasoactive intestinal peptide receptor 1
RGD ID: 13905488
Description: ENCODES a protein that exhibits vasoactive intestinal polypeptide receptor activity (inferred); INVOLVED IN G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger (ortholog); ASSOCIATED WITH achalasia (ortholog); Crohn's disease (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN integral component of membrane (inferred); plasma membrane (inferred); receptor complex (inferred)
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: PACAP type II receptor; PACAP-R-2; PACAP-R2; pituitary adenylate cyclase-activating polypeptide type II receptor; vasoactive intestinal polypeptide receptor 1; VIP-R-1; VPAC1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1326,036,629 - 26,075,691 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11326,036,610 - 26,073,168 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21328,704,211 - 28,740,358 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:25928928  


Genomics

Comparative Map Data
VIPR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1326,036,629 - 26,075,691 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11326,036,610 - 26,073,168 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21328,704,211 - 28,740,358 (+)NCBISscrofa10.2Sscrofa10.2susScr3
VIPR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl342,489,299 - 42,537,573 (+)EnsemblGRCh38hg38GRCh38
GRCh38342,489,299 - 42,537,573 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37342,530,791 - 42,579,065 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36342,519,121 - 42,554,064 (+)NCBINCBI36hg18NCBI36
Build 34342,519,120 - 42,554,064NCBI
Celera342,484,508 - 42,519,469 (+)NCBI
Cytogenetic Map3p22.1NCBI
HuRef342,574,992 - 42,623,180 (+)NCBIHuRef
CHM1_1342,481,967 - 42,530,261 (+)NCBICHM1_1
Vipr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399121,471,782 - 121,502,020 (+)NCBIGRCm39mm39
GRCm389121,642,716 - 121,672,954 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9121,642,716 - 121,672,954 (+)EnsemblGRCm38mm10GRCm38
MGSCv379121,551,834 - 121,582,072 (+)NCBIGRCm37mm9NCBIm37
MGSCv369121,491,414 - 121,519,332 (+)NCBImm8
Celera9122,116,040 - 122,146,512 (+)NCBICelera
Cytogenetic Map9F4NCBI
cM Map972.5NCBI
Vipr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08130,283,453 - 130,313,431 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08129,467,937 - 129,496,866 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera8120,444,918 - 120,474,479 (+)NCBICelera
Cytogenetic Map8q32NCBI
Vipr1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542028,234,153 - 28,253,168 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542028,234,590 - 28,253,146 (-)NCBIChiLan1.0ChiLan1.0
VIPR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1342,669,338 - 42,705,170 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl342,670,195 - 42,705,170 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0342,407,591 - 42,442,565 (+)NCBIMhudiblu_PPA_v0panPan3
VIPR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2311,635,394 - 11,666,936 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12311,635,809 - 11,666,926 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Vipr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366952,564,917 - 2,597,009 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
VIPR1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl223,950,193 - 3,984,948 (+)Ensembl
ChlSab1.1223,950,129 - 3,984,849 (+)NCBI
Vipr1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473077,128,547 - 77,155,531 (-)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 1 1
Low 8 1 3 2 1 11
Below cutoff 1 3 3 1 11 2 2 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_214036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005669395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005669397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013981507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013981508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013981510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU607093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU928031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GFLN01127052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM209403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM209404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM209405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM209406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM209407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM209408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM209409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM209410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM209411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U49434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSSSCT00000012349   ⟹   ENSSSCP00000012026
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1326,036,629 - 26,073,165 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000038088   ⟹   ENSSSCP00000042733
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1326,036,746 - 26,072,030 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000048329   ⟹   ENSSSCP00000031840
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1326,046,129 - 26,073,165 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000050683   ⟹   ENSSSCP00000059376
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1326,036,668 - 26,075,691 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000064983   ⟹   ENSSSCP00000055549
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1326,061,550 - 26,073,167 (+)Ensembl
RefSeq Acc Id: NM_214036   ⟹   NP_999201
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11326,036,610 - 26,073,168 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005669395   ⟹   XP_005669452
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11326,036,633 - 26,073,168 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005669397   ⟹   XP_005669454
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11326,036,752 - 26,073,168 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013981507   ⟹   XP_013836961
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11326,036,829 - 26,073,168 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013981508   ⟹   XP_013836962
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11326,036,746 - 26,073,168 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013981510   ⟹   XP_013836964
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11326,036,746 - 26,073,168 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021068242   ⟹   XP_020923901
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11326,051,193 - 26,073,168 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021068243   ⟹   XP_020923902
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11326,036,634 - 26,073,168 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_999201   ⟸   NM_214036
- Peptide Label: precursor
- UniProtKB: Q28992 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005669452   ⟸   XM_005669395
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_020923902   ⟸   XM_021068243
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_013836962   ⟸   XM_013981508
- Peptide Label: isoform X3
- UniProtKB: D9IWC2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013836964   ⟸   XM_013981510
- Peptide Label: isoform X7
- UniProtKB: D9IWC4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005669454   ⟸   XM_005669397
- Peptide Label: isoform X5
- UniProtKB: D9IWB9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013836961   ⟸   XM_013981507
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_020923901   ⟸   XM_021068242
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: ENSSSCP00000055549   ⟸   ENSSSCT00000064983
RefSeq Acc Id: ENSSSCP00000059376   ⟸   ENSSSCT00000050683
RefSeq Acc Id: ENSSSCP00000012026   ⟸   ENSSSCT00000012349
RefSeq Acc Id: ENSSSCP00000042733   ⟸   ENSSSCT00000038088
RefSeq Acc Id: ENSSSCP00000031840   ⟸   ENSSSCT00000048329

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000011280 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00070009860 UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000012026 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00000031840 UniProtKB/TrEMBL
  ENSSSCP00000042733 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00000055549 UniProtKB/TrEMBL
  ENSSSCP00000059376 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00070015999 UniProtKB/TrEMBL
  ENSSSCP00070016035 UniProtKB/TrEMBL
  ENSSSCP00070016053 UniProtKB/TrEMBL
  ENSSSCP00070016075 UniProtKB/TrEMBL
  ENSSSCP00070016094 UniProtKB/TrEMBL
  ENSSSCP00070016103 UniProtKB/TrEMBL
  ENSSSCP00070016116 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000012349 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00000038088 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00000048329 UniProtKB/TrEMBL
  ENSSSCT00000050683 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00000064983 UniProtKB/TrEMBL
  ENSSSCT00070019237 UniProtKB/TrEMBL
  ENSSSCT00070019275 UniProtKB/TrEMBL
  ENSSSCT00070019298 UniProtKB/TrEMBL
  ENSSSCT00070019321 UniProtKB/TrEMBL
  ENSSSCT00070019344 UniProtKB/TrEMBL
  ENSSSCT00070019354 UniProtKB/TrEMBL
  ENSSSCT00070019369 UniProtKB/TrEMBL
Gene3D-CATH 4.10.1240.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro GPCR_2-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_extracell_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_extracellular_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_secretin-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_secretin-like_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_VIP_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_VIP_rcpt_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report ssc:100155402 UniProtKB/Swiss-Prot
NCBI Gene VIPR1 ENTREZGENE
Pfam 7tm_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HRM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS GPCRSECRETIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VASOACTVEIPR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VIP1RECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F2_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F2_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F2_4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART HormR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF111418 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniGene Ssc.136 ENTREZGENE
UniProt A0A286ZJU9_PIG UniProtKB/TrEMBL
  A0A287BHE5_PIG UniProtKB/TrEMBL
  A0A287BT69_PIG UniProtKB/TrEMBL
  A0A288CFZ7_PIG UniProtKB/TrEMBL
  A0A4X1TH89_PIG UniProtKB/TrEMBL
  A0A4X1THI2_PIG UniProtKB/TrEMBL
  A0A4X1TJB0_PIG UniProtKB/TrEMBL
  A0A4X1TLQ0_PIG UniProtKB/TrEMBL
  A0A4X1TLQ5_PIG UniProtKB/TrEMBL
  A0A4X1TLS1_PIG UniProtKB/TrEMBL
  A0A4X1TLT2_PIG UniProtKB/TrEMBL
  D9IWB9 ENTREZGENE, UniProtKB/TrEMBL
  D9IWC2 ENTREZGENE, UniProtKB/TrEMBL
  D9IWC4 ENTREZGENE, UniProtKB/TrEMBL
  Q28992 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary F1SRG8 UniProtKB/TrEMBL
VGNC ID VGNC:94827 ENTREZGENE