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Gene: SLC1A3 (solute carrier family 1 member 3) Sus scrofa

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Symbol:

SLC1A3

Name:

solute carrier family 1 member 3

RGD ID:

13903841

Description:

ENCODES a protein that exhibits high-affinity L-glutamate transmembrane transporter activity (ortholog); L-glutamate transmembrane transporter activity (ortholog); INVOLVED IN L-glutamate transmembrane transport (ortholog); malate-aspartate shuttle (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); Cornelia de Lange syndrome 1 (ortholog); COVID-19 (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); dendritic spine (ortholog)

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

excitatory amino acid transporter 1; glutamate-aspartate transporter 1; glutamate-aspartate transporter 1b; solute carrier family 1 (glial high affinity glutamate transporter), member 3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	21,873,691 - 21,964,990 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	16	21,873,691 - 21,965,315 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	16	22,924,641 - 23,007,781 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

Cornelia de Lange syndrome 1 (ISO)

COVID-19 (ISO)

Developmental Disabilities (ISO)

epilepsy (ISO)

episodic ataxia (ISO)

episodic ataxia type 6 (ISO)

Experimental Diabetes Mellitus (ISO)

genetic disease (ISO)

low tension glaucoma (ISO)

Neurodevelopmental Disorders (ISO)

spastic ataxia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

amino acid transport (IEA)

auditory behavior (IEA)

cell morphogenesis involved in neuron differentiation (IEA)

cellular response to cocaine (IEA)

chloride transmembrane transport (IEA)

cranial nerve development (IEA)

D-aspartate import across plasma membrane (IBA,IEA)

gamma-aminobutyric acid biosynthetic process (IEA)

intracellular sodium ion homeostasis (IEA)

L-alpha-amino acid transmembrane transport (IEA)

L-aspartate import across plasma membrane (IBA,IEA)

L-aspartate transmembrane transport (IEA)

L-glutamate import (IEA)

L-glutamate import across plasma membrane (IBA,IEA)

L-glutamate transmembrane transport (IEA,ISO)

malate-aspartate shuttle (ISO)

neuromuscular process controlling balance (IEA)

neutral amino acid transport (IEA)

positive regulation of synaptic transmission (IEA)

potassium ion transmembrane transport (IEA)

response to antibiotic (IEA)

response to light stimulus (IEA)

response to wounding (IEA)

response to xenobiotic stimulus (IEA)

sensory perception of sound (IEA)

transepithelial transport (IEA)

transport across blood-brain barrier (IEA)

Cellular Component

basal plasma membrane (ISO)

basolateral plasma membrane (ISO)

cell periphery (IEA)

cell projection (IEA)

cell surface (IEA)

dendritic spine (ISO)

membrane (IEA)

membrane protein complex (ISO)

mitochondrial inner membrane (ISO)

neuron projection (IEA)

neuronal cell body (IEA)

plasma membrane (IBA,IEA)

synapse (IEA)

Molecular Function

acidic amino acid transmembrane transporter activity (IEA)

amino acid binding (IEA)

glutamate binding (IEA)

glutamate:sodium symporter activity (IBA,IEA)

high-affinity L-glutamate transmembrane transporter activity (IEA,ISO)

L-glutamate transmembrane transporter activity (IBA,IEA,ISO)

metal ion binding (IEA)

neutral L-amino acid transmembrane transporter activity (IBA)

protein binding (ISO)

symporter activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

nicotinamide adenine dinucleotide metabolic pathway (ISO)

References

Additional References at PubMed

PMID:14681463	PMID:22026960	PMID:30032202

Genomics

Comparative Map Data

SLC1A3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	21,873,691 - 21,964,990 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	16	21,873,691 - 21,965,315 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	16	22,924,641 - 23,007,781 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC1A3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	36,606,606 - 36,688,334 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	36,596,588 - 36,688,334 (+)	Ensembl			hg38	GRCh38
GRCh37	5	36,606,708 - 36,688,436 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	36,642,446 - 36,724,191 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	5	36,642,447 - 36,724,197	NCBI
Celera	5	36,493,385 - 36,575,353 (+)	NCBI		Celera
Cytogenetic Map	5	p13.2	NCBI
HuRef	5	36,559,517 - 36,641,481 (+)	NCBI		HuRef
CHM1_1	5	36,609,230 - 36,691,155 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	36,856,459 - 36,938,148 (+)	NCBI		T2T-CHM13v2.0

Slc1a3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	8,663,608 - 8,742,648 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	8,663,608 - 8,740,248 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	15	8,634,124 - 8,710,807 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	8,634,124 - 8,710,764 (-)	Ensembl			mm10	GRCm38
MGSCv37	15	8,584,124 - 8,660,807 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	15	8,581,339 - 8,657,945 (-)	NCBI		MGSCv36	mm8
Celera	15	8,479,667 - 8,556,633 (-)	NCBI		Celera
Cytogenetic Map	15	A1	NCBI
cM Map	15	3.82	NCBI

Slc1a3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	59,482,707 - 59,557,808 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	59,482,709 - 59,557,808 (-)	Ensembl				GRCr8
mRatBN7.2	2	57,755,495 - 57,830,605 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	57,755,497 - 57,830,605 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	2	64,851,543 - 64,926,640 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	62,946,162 - 63,021,300 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	57,947,345 - 58,022,485 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	57,860,881 - 57,935,363 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	57,860,834 - 57,935,363 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	79,348,443 - 79,422,645 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	58,270,236 - 58,347,613 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	53,367,866 - 53,442,429 (-)	NCBI		Celera
RGSC_v3.1	2	58,198,470 - 58,275,846 (-)	NCBI
Cytogenetic Map	2	q16	NCBI

Slc1a3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955426	21,371,985 - 21,451,069 (+)	Ensembl
ChiLan1.0	NW_004955426	21,371,985 - 21,450,749 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLC1A3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	73,645,238 - 73,727,200 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	71,798,870 - 71,880,587 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	73,679,841 - 73,761,591 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	78,960,797 - 79,042,694 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	78,960,797 - 79,042,694 (-)	Ensembl			panPan2	panpan1.1

SLC1A3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	71,936,128 - 72,014,119 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	71,936,126 - 72,014,173 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	71,545,756 - 71,624,038 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	72,446,075 - 72,524,440 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	72,445,714 - 72,524,563 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	72,192,176 - 72,270,091 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	72,315,043 - 72,393,341 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	72,846,428 - 72,924,441 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Slc1a3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	226,079,921 - 226,156,414 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936518	5,215,290 - 5,291,058 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936518	5,216,343 - 5,291,107 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC1A3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	4	35,473,425 - 35,557,118 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	4	35,473,658 - 35,557,138 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666071	25,803,256 - 25,886,938 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc1a3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624759	18,325,147 - 18,400,431 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624759	18,325,272 - 18,400,447 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in SLC1A3
3941 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001244425	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001289944	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001289945	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001289946	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021076550	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000102	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK231079	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK389716	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BW958483	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01086010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ699552	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ699553	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ699554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000018338 ⟹ ENSSSCP00000017842

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	21,873,691 - 21,963,797 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000042489 ⟹ ENSSSCP00000056055

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	21,873,691 - 21,963,797 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000051657 ⟹ ENSSSCP00000058224

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	21,873,709 - 21,961,486 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000061959 ⟹ ENSSSCP00000041926

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	21,873,691 - 21,963,797 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000063429 ⟹ ENSSSCP00000031604

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	21,873,709 - 21,964,990 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000073820 ⟹ ENSSSCP00000062297

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	21,873,716 - 21,906,819 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000106508 ⟹ ENSSSCP00000075710

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	21,873,709 - 21,964,641 (+)	Ensembl

RefSeq Acc Id:

NM_001244425 ⟹ NP_001231354

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	16	21,873,691 - 21,963,797 (+)	NCBI

Sequence:

show sequence

ATAGTAATTTGCAGTTTCAGAGCACATGCACGCCTTGCTCGCTGCGTTTTGTTGCTCCGCTGTA
CCTGCTGGGAATTCACCTTGTCATTGCCTGGGGTATCTTCCACCCGCCACAAAATCAGAAAAGT
TGTGTTCTTTAACACCAAAGAGGACTGGCTTTCTGGGGCTGATTCTGTGACATTGGAATTCAAA
GAAGAGACGCTCCAGAGAAATACGCTATGACTAAAAGCAATGGAGAAGAGGCCAGGATGGGGGG
CAGGATGGAGAGATTCCAGCAAGGAGTCCGTAAACGCACACTCTTGGCTAAGAAGAAAGTGCAG
AACATCACAAAGGAGGATGTTAAAAGTTACCTATTTCGGAATGCTTTTGTGCTGCTCACTGTCA
CCGCCGTCATTGTGGGTACAATCCTTGGGTTTGCCCTGCGACCATACAAAATGAGCTACCGGGA
AGTCAAGTACTTCTCCTTTCCTGGGGAGCTTCTGATGAGGATGCTACAGATGCTGGTGTTACCA
CTCATCATCTCCAGTCTTGTCACAGGAATGGCGGCCCTAGATAGTAAGGCGTCAGGGAAGATGG
GGATGCGAGCCGTAGTCTATTACATGACTACCACCGTCATTGCCGTGGTGATTGGCATAATCAT
TGTCATCATCATCCATCCTGGGAAGGGCACAAAGGAAAACATGCACAGAGAAGGCAAAATTGTA
CAAGTGACAGCTGCAGACGCCTTCCTGGACTTGATCAGGAATATGTTCCCTCCAAATCTGGTGG
AAGCCTGCTTTAAACAGTTTAAAACCAACTATGAGAAGAAAAGCTTTAAAGTGCCCATCCAACC
CAATGACACACTTGTGGGCGCCGTGATAAACAATGTGTCCGAGGCCATGGAGACGCTGACGAGG
ATCAAGGAGGAGTTAGTCCCAGTCCCAGGGTCTGTGAACGGGGTCAATGCCTTGGGACTCGTTG
TCTTCTCCATGTGCTTCGGATTCGTGATTGGAAACATGAAGGAGCAGGGGCAGGCCCTCAGAGA
GTTCTTTGACTCGCTTAACGAAGCCATCATGCGTCTGGTGGCCGTGATCATGTGGTACGCCCCT
CTGGGCATCCTCTTCCTGATTGCAGGGAAAATTGTTGAGATGGAAGACATGGGAGTGATTGGGG
GGCAGCTGGCCATGTACACAGTGACAGTCATCGTGGGCTTACTCATCCATGCCGTCATTGTCCT
GCCCCTCCTCTACTTCTTGGTAACACGGAAAAACCCATGGGTTTTCATCGGAGGGTTGTTGCAA
GCACTCGTCACAGCTCTAGGCACCTCCTCCAGCTCTGCCACCCTACCCATCACCTTCAAGTGCC
TGGAAGAGAACAATGGTGTGGACAAACGTGTCACCAGATTCGTGCTCCCAGTGGGGGCCACCAT
TAACATGGATGGGACCGCCCTCTATGAGGCTTTGGCTGCCATTTTTATTGCTCAAGTTAACAAC
TTCGAACTGAACTTTGGACAGATTATCACCATCAGCATCACAGCCACGGCGGCCAGTATCGGGG
CAGCTGGGATCCCTCAGGCGGGCCTGGTCACTATGGTCATCGTGCTGACATCCGTGGGCCTGCC
CACTGACGACATCACGCTCATCATCGCGGTGGACTGGTTCCTGGATCGGCTTCGCACCACAACC
AATGTCTTGGGAGACTCCCTGGGAGCCGGCATTGTTGAACACTTGTCCCGACATGAACTGAAGA
ACCGGGATGTCGAAATGGGCAACTCAGTGATCGAAGAGAATGAAATGAAGAAACCATATCAGCT
GATTGCCCAGGAAAGCGAAATCGAGAAACCCATCGACAGTGAAACCAAGATGTAGACGGACATA
AAATGTTTCCTTGAGCACCCGGTGTTTGAAAACCGCTATGACATGTCTCCATCTCGTTACAACT
CATTCTCTCCAGTAAGCCCCCTACCTCCCTTTTCCTCTCTACTCTGATAGGATTGGGAAGAATT
CATCCCAAAACAAGGGAGGATTTTGCAGTGGCCCAAATGTGTAGTTCTCATCCCACGTTTGAAA
TGTTTCCATCATGTCATGCTAGTCTTATCTATTAAGGTCCTGCGATCAGAAATGGTCTTGGATC
TTAAAAGTTGATGTGGCACACAATCCTGTAAATGTGATCATTCTTATAAATTAAAGCGTCAAAA
CG

hide sequence

RefSeq Acc Id:

NM_001289944 ⟹ NP_001276873

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	16	21,873,691 - 21,963,797 (+)	NCBI

Sequence:

show sequence

ATAGTAATTTGCAGTTTCAGAGCACATGCACGCCTTGCTCGCTGCGTTTTGTTGCTCCGCTGTA
CCTGCTGGGAATTCACCTTGTCATTGCCTGGGGTATCTTCCACCCGCCACAAAATCAGAAAAGT
TGTGTTCTTTAACACCAAAGAGGACTGGCTTTCTGGGGCTGATTCTGTGACATTGGAATTCAAA
GAAGAGACGCTCCAGAGAAATACGCTATGACGAAAAGCAATGGAGAAGAGGCCAGGATGGGGGG
CAGGATGGAGAGATTCCAGCAAGGAGTCCGTAAACGCACACTCTTGGCTAAGAAGAAAGTGCAG
AACATCACAAAGGAGGATGTTAAAAGTTACCTATTTCGGAATGCTTTTGTGCTGCTCACTGTCA
CCGCCGTCATTGTGGGAATGGCGGCCCTAGATAGTAAGGCGTCAGGGAAGATGGGGATGCGAGC
CGTAGTCTATTACATGACTACCACCGTCATTGCCGTGGTGATTGGCATAATCATTGTCATCATC
ATCCATCCTGGGAAGGGCACAAAGGAAAACATGCACAGAGAAGGCAAAATTGTACAAGTGACAG
CTGCAGACGCCTTCCTGGACTTGATCAGGAATATGTTCCCTCCAAATCTGGTGGAAGCCTGCTT
TAAACAGTTTAAAACCAACTATGAGAAGAAAAGCTTTAAAGTGCCCATCCAACCCAATGACACA
CTTGTGGGCGCCGTGATAAACAATGTGTCCGAGGCCATGGAGACGCTGACGAGGATCAAGGAGG
AGTTAGTCCCAGTCCCAGGGTCTGTGAACGGGGTCAATGCCTTGGGACTCGTTGTCTTCTACAT
GTGCTTCGGATTCGTGATTGGAAACATGAAGGAGCAGGGGCAGGCCCTCAGAGAGTTCTTTGAC
TCGCTTAACGAAGCCATCATGCGTCTGGTGGCCGTGATCATGTGGTACGCCCCTCTGGGCATCC
TCTTCCTGATTGCAGGGAAAATTGTTGAGATGGAAGACATGGGAGTGATTGGGGGGCAGCTGGC
CATGTACACAGTGACAGTCATCGTGGGCTTACTCATCCACGCCGTCATTGTCCTGCCCCTCCTC
TACTTCTTGGTAACACGGAAAAACCCATGGGTTTTCATCGGAGGGTTGTTGCAAGCACTCGTCA
CAGCTCTAGGCACCTCCTCCAGCTCTGCCACCCTACCCATCACCTTCAAGTGCCTGGAAGAGAA
CAATGGTGTGGACAAACGTGTCACCAGATTCGTGCTCCCAGTGGGGGCCACCATTAACATGGAT
GGGACCGCCCTCTATGAGGCTTTGGCTGCCATTTTTATTGCTCAAGTTAACAACTTCGAACTGA
ACTTTGGACAGATTATCACCATCAGCATCACAGCCACGGCGGCCAGTATCGGGGCAGCTGGGAT
CCCTCAGGCGGGCCTGGTCACTATGGTCATCGTGCTGACATCCGTGGGCCTGCCCACTGACGAC
ATCACGCTCATCATCGCGGTGGACTGGTTCCTGGATCGGCTTCGCACCACAACCAATGTCTTGG
GAGACTCCCTGGGAGCCGGCATTGTTGAACACTTGTCCCGACATGAACTGAAGAACCGGGATGT
CGAAATGGGCAACTCAGTGATCGAAGAGAATGAAATGAAGAAACCATATCAGCTGATTGCCCAG
GAAAGCGAAATCGAGAAACCCATCGACAGTGAAACCAAGATGTAGACGGACATAAAATGTTTCC
TTGAGCACCCGGTGTTTGAAAACCGCTATGACATGTCTCCATCTCGTTACAACTCATTCTCTCC
AGTAAGCCCCCTACCTCCCTTTTCCTCTCTACTCTGATAGGATTGGGAAGAATTCATCCCAAAA
CAAGGGAGGATTTTGCAGTGGCCCAAATGTGTAGTTCTCATCCCACGTTTGAAATGTTTCCATC
ATGTCATGCTAGTCTTATCTATTAAGGTCCTGCGATCAGAAATGGTCTTGGATCTTAAAAGTTG
ATGTGGCACACAATCCTGTAAATGTGATCATTCTTATAAATTAAAGCGTCAAAACG

hide sequence

RefSeq Acc Id:

NM_001289945 ⟹ NP_001276874

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	16	21,873,691 - 21,963,797 (+)	NCBI

Sequence:

show sequence

ATAGTAATTTGCAGTTTCAGAGCACATGCACGCCTTGCTCGCTGCGTTTTGTTGCTCCGCTGTA
CCTGCTGGGAATTCACCTTGTCATTGCCTGGGGTATCTTCCACCCGCCACAAAATCAGAAAAGT
TGTGTTCTTTAACACCAAAGAGGACTGGCTTTCTGGGGCTGATTCTGTGACATTGGAATTCAAA
GAAGAGACGCTCCAGAGAAATACGCTATGACGAAAAGCAATGGAGAAGAGGCCAGGATGGGGGG
CAGGATGGAGAGATTCCAGCAAGGAGTCCGTAAACGCACACTCTTGGCTAAGAAGAAAGTGCAG
AACATCACAAAGGAGGATGTTAAAAGTTACCTATTTCGGAATGCTTTTGTGCTGCTCACTGTCA
CCGCCGTCATTGTGGGTACAATCCTTGGGTTTGCCCTGCGACCATACAAAATGAGCTACCGGGA
AGTCAAGTACTTCTCCTTTCCTGGGGAGCTTCTGATGAGGATGCTACAGATGCTGGTGTTACCA
CTCATCATCTCCAGTCTTGTCACAGGAATGGCGGCCCTAGATAGTAAGGCGTCAGGGAAGATGG
GGATGCGAGCCGTAGTCTATTACATGACTACCACCGTCATTGCCGTGGTGATTGGCATAATCAT
TGTCATCATCATCCATCCTGGGAAGGGCACAAAGGAAAACATGCACAGAGAAGGCAAAATTGTA
CAAGTGACAGCTGCAGACGCCTTCCTGGACTTGATCAGGAATATGTTCCCTCCAAATCTGGTGG
AAGCCTGCTTTAAACAGTTTAAAACCAACTATGAGAAGAAAAGCTTTAAAGTGCCCATCCAACC
CAATGACACACTTGTGGGCGCCGTGATAAACAATGTGTCCGAGGCCATGGAGACGCTGACGAGG
ATCAAGGAGGAGTTAGTCCCAGTCCCAGGGTCTGTGAACGGGGTCAATGCCTTGGGACTCGTTG
TCTTCTACATGTGCTTCGGATTCGTGATTGGAAACATGAAGGAGCAGGGGCAGGCCCTCAGAGA
GTTCTTTGACTCGCTTAACGAAGCCATCATGCGTCTGGTGGCCGTGATCATGTGGTACGCCCCT
CTGGGCATCCTCTTCCTGATTGCAGGGAAAATTGTTGAGATGGAAGACATGGGAGTGATTGGGG
GGCAGCTGGCCATGTACACAGTGACAGTCATCGTGGGCTTACTCATCCACGCCGTCATTGTCCT
GCCCCTCCTCTACTTCTTGGTAACACGGAAAAACCCATGGGTTTTCATCGGAGGGTTGTTGCAA
GCACTCGTCACAGCTCTAGGCACCTCCTCCAGCTCTGCCACCCTACCCATCACCTTCAAGTGCC
TGGAAGAGAACAATGGTGTGGACAAACGTGTCACCAGATTCGTGCTCCCAGTGGGGGCCACCAT
TAACATGGATGGGACCGCCCTCTATGAGGCTTTGGCTGCCATTTTTATTGCTCAAGTTAACAAC
TTCGAACTGAACTTTGGACAGATTATCACCATCAGGGATCGGCTTCGCACCACAACCAATGTCT
TGGGAGACTCCCTGGGAGCCGGCATTGTTGAACACTTGTCCCGACATGAACTGAAGAACCGGGA
TGTCGAAATGGGCAACTCAGTGATCGAAGAGAATGAAATGAAGAAACCATATCAGCTGATTGCC
CAGGAAAGCGAAATCGAGAAACCCATCGACAGTGAAACCAAGATGTAGACGGACATAAAATGTT
TCCTTGAGCACCCGGTGTTTGAAAACCGCTATGACATGTCTCCATCTCGTTACAACTCATTCTC
TCCAGTAAGCCCCCTACCTCCCTTTTCCTCTCTACTCTGATAGGATTGGGAAGAATTCATCCCA
AAACAAGGGAGGATTTTGCAGTGGCCCAAATGTGTAGTTCTCATCCCACGTTTGAAATGTTTCC
ATCATGTCATGCTAGTCTTATCTATTAAGGTCCTGCGATCAGAAATGGTCTTGGATCTTAAAAG
TTGATGTGGCACACAATCCTGTAAATGTGATCATTCTTATAAATTAAAGCGTCAAAACG

hide sequence

RefSeq Acc Id:

NM_001289946 ⟹ NP_001276875

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	16	21,873,691 - 21,963,797 (+)	NCBI

Sequence:

show sequence

ATAGTAATTTGCAGTTTCAGAGCACATGCACGCCTTGCTCGCTGCGTTTTGTTGCTCCGCTGTA
CCTGCTGGGAATTCACCTTGTCATTGCCTGGGGTATCTTCCACCCGCCACAAAATCAGAAAAGT
TGTGTTCTTTAACACCAAAGAGGACTGGCTTTCTGGGGCTGATTCTGTGACATTGGAATTCAAA
GAAGAGACGCTCCAGAGAAATACGCTATGACGAAAAGCAATGGAGAAGAGGCCAGGATGGGGGG
CAGGATGGAGAGATTCCAGCAAGGAGTCCGTAAACGCACACTCTTGGCTAAGAAGAAAGTGCAG
AACATCACAAAGGAGGATGTTAAAAGTTACCTATTTCGGAATGCTTTTGTGCTGCTCACTGTCA
CCGCCGTCATTGTGGGTACAATCCTTGGGTTTGCCCTGCGACCATACAAAATGAGCTACCGGGA
AGTCAAGTACTTCTCCTTTCCTGGGGAGCTTCTGATGAGGATGCTACAGATGCTGGTGTTACCA
CTCATCATCTCCAGTCTTGTCACAGGAATGGCGGCCCTAGATAGTAAGGCGTCAGGGAAGATGG
GGATGCGAGCCGTAGTCTATTACATGACTACCACCGTCATTGCCGTGGTGATTGGCATAATCAT
TGTCATCATCATCCATCCTGGGAAGGGCACAAAGGAAAACATGCACAGAGAAGGCAAAATTGTA
CAAGTGACAGCTGCAGACGCCTTCCTGGACTTGATCAGGTACGCCCCTCTGGGCATCCTCTTCC
TGATTGCAGGGAAAATTGTTGAGATGGAAGACATGGGAGTGATTGGGGGGCAGCTGGCCATGTA
CACAGTGACAGTCATCGTGGGCTTACTCATCCACGCCGTCATTGTCCTGCCCCTCCTCTACTTC
TTGGTAACACGGAAAAACCCATGGGTTTTCATCGGAGGGTTGTTGCAAGCACTCGTCACAGCTC
TAGGCACCTCCTCCAGCTCTGCCACCCTACCCATCACCTTCAAGTGCCTGGAAGAGAACAATGG
TGTGGACAAACGTGTCACCAGATTCGTGCTCCCAGTGGGGGCCACCATTAACATGGATGGGACC
GCCCTCTATGAGGCTTTGGCTGCCATTTTTATTGCTCAAGTTAACAACTTCGAACTGAACTTTG
GACAGATTATCACCATCAGCATCACAGCCACGGCGGCCAGTATCGGGGCAGCTGGGATCCCTCA
GGCGGGCCTGGTCACTATGGTCATCGTGCTGACATCCGTGGGCCTGCCCACTGACGACATCACG
CTCATCATCGCGGTGGACTGGTTCCTGGATCGGCTTCGCACCACAACCAATGTCTTGGGAGACT
CCCTGGGAGCCGGCATTGTTGAACACTTGTCCCGACATGAACTGAAGAACCGGGATGTCGAAAT
GGGCAACTCAGTGATCGAAGAGAATGAAATGAAGAAACCATATCAGCTGATTGCCCAGGAAAGC
GAAATCGAGAAACCCATCGACAGTGAAACCAAGATGTAGACGGACATAAAATGTTTCCTTGAGC
ACCCGGTGTTTGAAAACCGCTATGACATGTCTCCATCTCGTTACAACTCATTCTCTCCAGTAAG
CCCCCTACCTCCCTTTTCCTCTCTACTCTGATAGGATTGGGAAGAATTCATCCCAAAACAAGGG
AGGATTTTGCAGTGGCCCAAATGTGTAGTTCTCATCCCACGTTTGAAATGTTTCCATCATGTCA
TGCTAGTCTTATCTATTAAGGTCCTGCGATCAGAAATGGTCTTGGATCTTAAAAGTTGATGTGG
CACACAATCCTGTAAATGTGATCATTCTTATAAATTAAAGCGTCAAAACG

hide sequence

RefSeq Acc Id:

XM_021076550 ⟹ XP_020932209

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	16	21,940,349 - 21,965,315 (+)	NCBI

Sequence:

show sequence

ACCCAGAGCAGAAGTGGGCAAGCAGCCCAGTGGACTGCAGACCCCTTTTAGGGGAAGGACCTAA
CAGATAAATGGTTAGGGAAGATACCCACCCCCCTACACACACACACACACCCCTTCCTTGGTTG
AGACAATCACAGCTGCTGCTTTATTCTCTTTCAGTGGAAAAGGACCAGGAGTTCCCTGGTGGCT
CAGCAGGTTGAGGATCTGGTGTTGTCATTGACGTGTCTCTGGTTACTGCTGTGGCTTGGGTTCG
ATCCTCGGTCCTAAAACTTCAGCAGACCATAGGTGTGGCCAAAACAAACAAACAAACAAACAAA
CAAAGGAAAAGGGTCCAATATCAGAGGTTGCGAGGCCTCTCATTTGACTATTGATTCTCCTTCT
AGGCTCACTGCTAAAAAAAATGCCTCAAGGTTTGTCTTCAGGTATTACAGGATTAGAAATTATG
GAGAAAATACTTTCATACCGGTATTCTTTTTAAAAAATAAAAAATAAAGAAAACCACCTATAAA
CTTTGTTTTCTAGAGCCGATGGCCCTGTAGCTGTGGATGCTGGAATAACTTTCTCCCCCCTCCC
CCGCCGCCCCGTGGTGGGAGGGAGGGAGACTTAAGCCTCCTCCTTTGTCTGCCCCGTTGGTTTC
CAGTGCTCTGCCTTGACCACTTAGCGCTCTCTCTGAATAGCTATAGGTCGGGAATAGTGGGCAG
GAGCGTCAGAGAAGAGTTGGCGTGAGAACGGAACAGCACCACAGAATAGAAGGCGAGAGGGAAA
GAAAGCATCTCGGAGGAAGAAAATACTGCTGCCTGGTACCCCCCCCAGCAGAGATATCCGGCCT
ATTGTGCCCACACCACTCACCCGCCGAAGAATTGCAGGCTTCAGTGGTGACAAGCTCAGGCAAT
GATGGGAAGGAGAGTGGGCCCCTTCTGGGAGAAATGATTTCAAGCACAGGAAAGCCAAGACATG
TGGAGATGTGATGGAGACCTGAGAATGAACCTGGGGGCGGGGGAATGGGACCCCTTGGATTGAG
AACAGATTAGCCCATTTTTAATGACGGTGGAGTGTGGAAGTGGCGCCACCCCAATAAGGGGGTT
TCAGCCCTGGGTTTCAAGAACCAGGGCAAGGATGAAAGAAGCTAAGTTCATGCATGAAAGCCAA
AATTGGCCTCCTCACTGTGGGAGCCGCAGTTGGTTTTCTCGGGGGCAGAAGGCACACACTAAAT
CCAGCAACATAATAACTGGATTTATGCTCCCCTCGCTTTTGCTTGGTATTCAGCAAGACCTTGC
TTAATTGTCCTTGAATCTGCCTTAAAGGTTGTTGTTAAAAATAAGAACACATGGAGGACTGAGT
GCTTATTACGAACATTATGAATGATATGATTCAACGACACACAAAATTATAACTTGAAAGTCGT
GGCTTCAGTTCTCATATAAGCTCATTACCATTGTCTCAAGATGTGGGCAGTTATTGGGCAGTCA
TGGGCACTATTTTTTTCAATACTTTACCTTCTTCTAAGTACATTTGTATGAACAGGGTTGCTAC
CTACATGTTGAACCACTATTCAAATCTGATACTGATCACAGAAATACAGCGTAACCTTTAACAA
TATTTAGAGAATGACACTTTTAAATAGTAAAGACAGTCGTTTGCTTAACTATCATTGGATGAGG
TTATATTTGGATAATGTCATAATTGGATAACTACATCCACACTACAGAGTGTTTTAGTGGATTT
GGGGAGGACAAAGAAGGAAGAGAAGTGAAGACGTGGCTAATGAAAGAGAAGAGCCCCTATTATT
CTAGATGACCTAATCTTTTGAGAATTTTGCATCCTTTCCAATTTTTTTTTTTTTTTCCCATCCC
AAGAGGTATGGAGATGGGTTCCCTTTGCTGGAGCGATTAAGGGAACCTTCAAAGGCAGGACTCC
TTATTCCTGAGGATTATACCTTCCCCGAGGACTCTTTGAAGAAGTCCTGAAAACAAGGGGAAGA
ATGTTAATGGGAGATAAGGCACCCACCCCAGGCCTGTGGGACAAGGTGGAGGAAGGCAGAGGGC
AAAAATGAGAAGAACCCCACCGACATGATTCTTTTAAAAATGTTTTGATCAGATGAGATAAAAT
GAAACGACAGAGATGCTCTTTGAGACCTTTGGCCTACTTTAAATGCAAATCGAAGATAAATCCG
GAGGAATGGCGGCCCTAGATAGTAAGGCGTCAGGGAAGATGGGGATGCGAGCCGTAGTCTATTA
CATGACTACCACCGTCATTGCCGTGGTGATTGGCATAATCATTGTCATCATCATCCATCCTGGG
AAGGGCACAAAGGAAAACATGCACAGAGAAGGCAAAATTGTACAAGTGACAGCTGCAGACGCCT
TCCTGGACTTGATCAGGAATATGTTCCCTCCAAATCTGGTGGAAGCCTGCTTTAAACAGTTTAA
AACCAACTATGAGAAGAAAAGCTTTAAAGTGCCCATCCAACCCAATGACACACTTGTGGGCGCC
GTGATAAACAATGTGTCCGAGGCCATGGAGACGCTGACGAGGATCAAGGAGGAGTTAGTCCCAG
TCCCAGGGTCTGTGAACGGGGTCAATGCCTTGGGACTCGTTGTCTTCTCCATGTGCTTCGGATT
CGTGATTGGAAACATGAAGGAGCAGGGGCAGGCCCTCAGAGAGTTCTTTGACTCGCTTAACGAA
GCCATCATGCGTCTGGTGGCCGTGATCATGTGGTACGCCCCTCTGGGCATCCTCTTCCTGATTG
CAGGGAAAATTGTTGAGATGGAAGACATGGGAGTGATTGGGGGGCAGCTGGCCATGTACACAGT
GACAGTCATCGTGGGCTTACTCATCCATGCCGTCATTGTCCTGCCCCTCCTCTACTTCTTGGTA
ACACGGAAAAACCCATGGGTTTTCATCGGAGGGTTGTTGCAAGCACTCGTCACAGCTCTAGGCA
CCTCCTCCAGCTCTGCCACCCTACCCATCACCTTCAAGTGCCTGGAAGAGAACAATGGTGTGGA
CAAACGTGTCACCAGATTCGTGCTCCCAGTGGGGGCCACCATTAACATGGATGGGACCGCCCTC
TATGAGGCTTTGGCTGCCATTTTTATTGCTCAAGTTAACAACTTCGAACTGAACTTTGGACAGA
TTATCACCATCAGCATCACAGCCACGGCGGCCAGTATCGGGGCAGCTGGGATCCCTCAGGCGGG
CCTGGTCACTATGGTCATCGTGCTGACATCCGTGGGCCTGCCCACTGACGACATCACGCTCATC
ATCGCGGTGGACTGGTTCCTGGATCGGCTTCGCACCACAACCAATGTCTTGGGAGACTCCCTGG
GAGCCGGCATTGTTGAACACTTGTCCCGACATGAACTGAAGAACCGGGATGTCGAAATGGGCAA
CTCAGTGATCGAAGAGAATGAAATGAAGAAACCATATCAGCTGATTGCCCAGGAAAGCGAAATC
GAGAAACCCATCGACAGTGAAACCAAGATGTAGACGGACATAAAATGTTTCCTTGAGCACCCGG
TGTTTGAAAACCGCTATGACATGTCTCCATCTCGTTACAACTCATTCTCTCCAGTAAGCCCCCT
ACCTCCCTTTTCCTCTCTACTCTGATAGGATTGGGAAGAATTCATCCCAAAACAAGGGAGGATT
TTGCAGTGGCCCAAATGTGTAGTTCTCATCCCACGTTTGAAATGTTTCCATCATGTCATGCTAG
TCTTATCTATTAAGGTCCTGCGATCAGAAATGGTCTTGGATCTTAAAAGTTGATGTGGCACACA
ATCCTGTAAATGTGATCATTCTTATAAATTAAAGCGTCAAAACGAATAGTAAGCTGAAGACATA
GTTTTAAATCAACCTTCAAAATTTACAAATCCTTCAGGATACAATTCAGTTTTAGTATCAGAAC
ACAGCAACCTGATAAGCAGTGGGTTCTCAGTTGGACATTGGAAGAGGTTTTTTTTTTTCCTCCC
ATTCTCTTGAGATTTGTGTCTTTATTTTACCAGTAGCAGGACAATAGAAATACACAACTAGCAC
AGCCGTGAGGAGGCATGTAAAGTGAAATTTCCCTGTGGCTGTGGGCAAGTCTCGTCTCTAGGTC
TCAGTGTTTTCATCTGCAAAAGGAACGAGTTGTCTAGATGTCCTTATGGTTGATTCTAGCCCAG
AGGTACTGAGGCGCCATGGAAGAGCCTGCCCTCTACTCCCCCTTGGGACATCCCATGGCAAGTA
TCATTCCACAGAGCATGGGACTTTCAGCAGAGAGTTGTTGGGAGTGACCATTTCTAGGGAGGGG
CAGGGTGGCTGTGCAGTTTACCAGGTTCCATGTCCAGAATGGCAGAGTCAGCAGGCTGGAGGCC
ATTCCAGGAGTGGATGTGCTCCCCCAAACTCTGCCTTGATCTTCCCAACAGGGGATCCATTCCC
TTCACTCTTCCCAAACTAAAGGGAACCACGCTAGGAAGAGTGTCTCCCACCACTCCTCAACTGA
TGATAGACCTTTAGAAAATACCACGCAAGACTAGCAACTAGCAAGCATGCTATGGTCTTACTAT
GGAACAGTAAAGAGCCAGCCAGGAAAGAGTGGAGCATGGTTGACGTGATAAAGAGAGGATTTTA
GAATACCAAGGTTATACGTCATCTTTAAGGAAGAGTTTTTTAGAAGGAGAGATTCTTAAAAGAA
AAAAAAAACAACAAACCTGAAACTTTTTCTCTTCAGTTCAAAAATCATTCCCTAAGGAAGTCTG
CAAATCAAAATATAAGGTCACATGTATTTTCAAATCAAATCAATGAGCTCTCTCTACTAGAGGC
CCATGAGCTGCATGGGTGGTCTCTTATTTGAAAAAGTTTTTTTTTTTTTTTTTTTTTTTACTAT
AATCAAAAGTTCTTAGAATGAGAGAAACAGGATATTTCTTTGTGTTGGAATTCCACTCACCAAA
TCTTTCGAAACCTTCAGCTGGAATGGGAATTATTTTGGTTTTGTTTGTGTCCCTGGGAGAAATG
GTAGAAGAAGCATCAGTATGAAGCCACATCAGTGGGGTTCCAAGAGGGGAGAAAAAAAGAGGCC
TTAGTTTCAGGTGAGGCAGCTACCAGGTTTAAAGGAGATTAATATTTGTACTCTAAGGAATATC
CAGTCAAAGATGCAGAGCGGGAGCTGTCAGACAATACCAGCTGTGTTTGAATTACTCATGTAAA
TGGTGAAGAATGGACTTAATTATGCTAACAGACTGAAAATCTAGACCGCCATCCTCTGATATAC
AATTAGAGATGTTTTTATATAGATCGCCAGCATTATGTGTGTACAAAAGTTAACGTTAGGCTGT
GGTGGAGTAACCCTTTAATGTCAAGG

hide sequence

Protein Sequences


Protein RefSeqs	NP_001231354	(Get FASTA)	NCBI Sequence Viewer
	NP_001276873	(Get FASTA)	NCBI Sequence Viewer
	NP_001276874	(Get FASTA)	NCBI Sequence Viewer
	NP_001276875	(Get FASTA)	NCBI Sequence Viewer
	XP_020932209	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AEO52636	(Get FASTA)	NCBI Sequence Viewer
	AEO52637	(Get FASTA)	NCBI Sequence Viewer
	AEO52638	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000017842
	ENSSSCP00000017842.3
	ENSSSCP00000031604
	ENSSSCP00000031604.1
	ENSSSCP00000041926
	ENSSSCP00000041926.1
	ENSSSCP00000056055
	ENSSSCP00000056055.1
	ENSSSCP00000058224.2
	ENSSSCP00000075710.1
	ENSSSCP00015043787.1
	ENSSSCP00015044039.1
	ENSSSCP00015044049.1
	ENSSSCP00015044184.1
	ENSSSCP00015044207.1
	ENSSSCP00015044226.1
	ENSSSCP00015044244.1
	ENSSSCP00015044256.1
	ENSSSCP00025010003.1
	ENSSSCP00025010020.1
	ENSSSCP00025010030.1
	ENSSSCP00025010076.1
	ENSSSCP00025010145.1
	ENSSSCP00025010150.1
	ENSSSCP00025010175.1
	ENSSSCP00025010194.1
	ENSSSCP00030024145.1
	ENSSSCP00035034562.1
	ENSSSCP00035034591.1
	ENSSSCP00035034594.1
	ENSSSCP00035034604.1
	ENSSSCP00035034606.1
	ENSSSCP00035034607.1
	ENSSSCP00035034608.1
	ENSSSCP00035034610.1
	ENSSSCP00040032618.1
	ENSSSCP00040032886.1
	ENSSSCP00040032899.1
	ENSSSCP00040033116.1
	ENSSSCP00040033143.1
	ENSSSCP00040033169.1
	ENSSSCP00040033189.1
	ENSSSCP00040033223.1
	ENSSSCP00045005835.1
	ENSSSCP00045005861.1
	ENSSSCP00045005870.1
	ENSSSCP00045005884.1
	ENSSSCP00045005886.1
	ENSSSCP00045005890.1
	ENSSSCP00045005892.1
	ENSSSCP00045005893.1
	ENSSSCP00050020741.1
	ENSSSCP00050020742.1
	ENSSSCP00050020743.1
	ENSSSCP00050020745.1
	ENSSSCP00050020754.1
	ENSSSCP00050020757.1
	ENSSSCP00050020762.1
	ENSSSCP00050020765.1
	ENSSSCP00055019611.1
	ENSSSCP00055019648.1
	ENSSSCP00055019668.1
	ENSSSCP00055019805.1
	ENSSSCP00055019902.1
	ENSSSCP00055019973.1
	ENSSSCP00055020032.1
	ENSSSCP00060042050.1
	ENSSSCP00060042084.1
	ENSSSCP00060042139.1
	ENSSSCP00060042154.1
	ENSSSCP00060042162.1
	ENSSSCP00060042174.1
	ENSSSCP00060042183.1
	ENSSSCP00065018775.1
	ENSSSCP00065018778.1
	ENSSSCP00065018781.1
	ENSSSCP00065018804.1
	ENSSSCP00065018838.1
	ENSSSCP00065018842.1
	ENSSSCP00065018847.1
	ENSSSCP00065018857.1
	ENSSSCP00070012230.1
	ENSSSCP00070012235.1
	ENSSSCP00070012249.1
	ENSSSCP00070012257.1
	ENSSSCP00070012263.1
	ENSSSCP00070012274.1

RefSeq Acc Id:	NP_001231354 ⟸ NM_001244425
- Peptide Label:	isoform 1
- UniProtKB:	H6TB56 (UniProtKB/TrEMBL), A0A8D1WMV7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTKSNGEEARMGGRMERFQQGVRKRTLLAKKKVQNITKEDVKSYLFRNAFVLLTVTAVIVGTIL GFALRPYKMSYREVKYFSFPGELLMRMLQMLVLPLIISSLVTGMAALDSKASGKMGMRAVVYYM TTTVIAVVIGIIIVIIIHPGKGTKENMHREGKIVQVTAADAFLDLIRNMFPPNLVEACFKQFKT NYEKKSFKVPIQPNDTLVGAVINNVSEAMETLTRIKEELVPVPGSVNGVNALGLVVFSMCFGFV IGNMKEQGQALREFFDSLNEAIMRLVAVIMWYAPLGILFLIAGKIVEMEDMGVIGGQLAMYTVT VIVGLLIHAVIVLPLLYFLVTRKNPWVFIGGLLQALVTALGTSSSSATLPITFKCLEENNGVDK RVTRFVLPVGATINMDGTALYEALAAIFIAQVNNFELNFGQIITISITATAASIGAAGIPQAGL VTMVIVLTSVGLPTDDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRHELKNRDVEMGNS VIEENEMKKPYQLIAQESEIEKPIDSETKM hide sequence

RefSeq Acc Id:	NP_001276874 ⟸ NM_001289945
- Peptide Label:	isoform 3
- UniProtKB:	H6TB55 (UniProtKB/TrEMBL), A0A4X1TAS8 (UniProtKB/TrEMBL), F1SNA0 (UniProtKB/TrEMBL), A0A8D0UJQ8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTKSNGEEARMGGRMERFQQGVRKRTLLAKKKVQNITKEDVKSYLFRNAFVLLTVTAVIVGTIL GFALRPYKMSYREVKYFSFPGELLMRMLQMLVLPLIISSLVTGMAALDSKASGKMGMRAVVYYM TTTVIAVVIGIIIVIIIHPGKGTKENMHREGKIVQVTAADAFLDLIRNMFPPNLVEACFKQFKT NYEKKSFKVPIQPNDTLVGAVINNVSEAMETLTRIKEELVPVPGSVNGVNALGLVVFYMCFGFV IGNMKEQGQALREFFDSLNEAIMRLVAVIMWYAPLGILFLIAGKIVEMEDMGVIGGQLAMYTVT VIVGLLIHAVIVLPLLYFLVTRKNPWVFIGGLLQALVTALGTSSSSATLPITFKCLEENNGVDK RVTRFVLPVGATINMDGTALYEALAAIFIAQVNNFELNFGQIITIRDRLRTTTNVLGDSLGAGI VEHLSRHELKNRDVEMGNSVIEENEMKKPYQLIAQESEIEKPIDSETKM hide sequence

RefSeq Acc Id:	NP_001276875 ⟸ NM_001289946
- Peptide Label:	isoform 4
- UniProtKB:	A0A287BI76 (UniProtKB/TrEMBL), H6TB54 (UniProtKB/TrEMBL), A0A4X1TA36 (UniProtKB/TrEMBL), A0A8D1AVR0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTKSNGEEARMGGRMERFQQGVRKRTLLAKKKVQNITKEDVKSYLFRNAFVLLTVTAVIVGTIL GFALRPYKMSYREVKYFSFPGELLMRMLQMLVLPLIISSLVTGMAALDSKASGKMGMRAVVYYM TTTVIAVVIGIIIVIIIHPGKGTKENMHREGKIVQVTAADAFLDLIRYAPLGILFLIAGKIVEM EDMGVIGGQLAMYTVTVIVGLLIHAVIVLPLLYFLVTRKNPWVFIGGLLQALVTALGTSSSSAT LPITFKCLEENNGVDKRVTRFVLPVGATINMDGTALYEALAAIFIAQVNNFELNFGQIITISIT ATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEH LSRHELKNRDVEMGNSVIEENEMKKPYQLIAQESEIEKPIDSETKM hide sequence

RefSeq Acc Id:	NP_001276873 ⟸ NM_001289944
- Peptide Label:	isoform 2
- UniProtKB:	A0A287ADP4 (UniProtKB/TrEMBL), A0A4X1TA30 (UniProtKB/TrEMBL), A0A8D0Q5U2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTKSNGEEARMGGRMERFQQGVRKRTLLAKKKVQNITKEDVKSYLFRNAFVLLTVTAVIVGMAA LDSKASGKMGMRAVVYYMTTTVIAVVIGIIIVIIIHPGKGTKENMHREGKIVQVTAADAFLDLI RNMFPPNLVEACFKQFKTNYEKKSFKVPIQPNDTLVGAVINNVSEAMETLTRIKEELVPVPGSV NGVNALGLVVFYMCFGFVIGNMKEQGQALREFFDSLNEAIMRLVAVIMWYAPLGILFLIAGKIV EMEDMGVIGGQLAMYTVTVIVGLLIHAVIVLPLLYFLVTRKNPWVFIGGLLQALVTALGTSSSS ATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTALYEALAAIFIAQVNNFELNFGQIITIS ITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWFLDRLRTTTNVLGDSLGAGIV EHLSRHELKNRDVEMGNSVIEENEMKKPYQLIAQESEIEKPIDSETKM hide sequence

RefSeq Acc Id:	XP_020932209 ⟸ XM_021076550
- Peptide Label:	isoform X1
- UniProtKB:	A0A287ADP4 (UniProtKB/TrEMBL), A0A4X1TA30 (UniProtKB/TrEMBL), A0A8D0Q5U2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQIEDKSGGMAALDSKASGKMGMRAVVYYMTTTVIAVVIGIIIVIIIHPGKGTKENMHREGKIV QVTAADAFLDLIRNMFPPNLVEACFKQFKTNYEKKSFKVPIQPNDTLVGAVINNVSEAMETLTR IKEELVPVPGSVNGVNALGLVVFSMCFGFVIGNMKEQGQALREFFDSLNEAIMRLVAVIMWYAP LGILFLIAGKIVEMEDMGVIGGQLAMYTVTVIVGLLIHAVIVLPLLYFLVTRKNPWVFIGGLLQ ALVTALGTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTALYEALAAIFIAQVNN FELNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWFLDRLRTTT NVLGDSLGAGIVEHLSRHELKNRDVEMGNSVIEENEMKKPYQLIAQESEIEKPIDSETKM hide sequence

Ensembl Acc Id:

ENSSSCP00000062297 ⟸ ENSSSCT00000073820

Ensembl Acc Id:

ENSSSCP00000058224 ⟸ ENSSSCT00000051657

Ensembl Acc Id:

ENSSSCP00000056055 ⟸ ENSSSCT00000042489

Ensembl Acc Id:

ENSSSCP00000041926 ⟸ ENSSSCT00000061959

Ensembl Acc Id:

ENSSSCP00000031604 ⟸ ENSSSCT00000063429

Ensembl Acc Id:

ENSSSCP00000017842 ⟸ ENSSSCT00000018338

Ensembl Acc Id:

ENSSSCP00000075710 ⟸ ENSSSCT00000106508

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000016841	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015077402	UniProtKB/TrEMBL
	ENSSSCG00025017571	UniProtKB/TrEMBL
	ENSSSCG00030037971	UniProtKB/TrEMBL
	ENSSSCG00035061907	UniProtKB/TrEMBL
	ENSSSCG00040055978	UniProtKB/TrEMBL
	ENSSSCG00045005172	UniProtKB/TrEMBL
	ENSSSCG00050036929	UniProtKB/TrEMBL
	ENSSSCG00055012543	UniProtKB/TrEMBL
	ENSSSCG00060070962	UniProtKB/TrEMBL
	ENSSSCG00065032523	UniProtKB/TrEMBL
	ENSSSCG00070007612	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000018338	ENTREZGENE
	ENSSSCT00000018338.3	UniProtKB/TrEMBL
	ENSSSCT00000042489	ENTREZGENE
	ENSSSCT00000042489.1	UniProtKB/TrEMBL
	ENSSSCT00000051657.2	UniProtKB/TrEMBL
	ENSSSCT00000061959	ENTREZGENE
	ENSSSCT00000061959.1	UniProtKB/TrEMBL
	ENSSSCT00000063429	ENTREZGENE
	ENSSSCT00000063429.3	UniProtKB/TrEMBL
	ENSSSCT00000106508.1	UniProtKB/TrEMBL
	ENSSSCT00015104678.1	UniProtKB/TrEMBL
	ENSSSCT00015105167.1	UniProtKB/TrEMBL
	ENSSSCT00015105189.1	UniProtKB/TrEMBL
	ENSSSCT00015105430.1	UniProtKB/TrEMBL
	ENSSSCT00015105464.1	UniProtKB/TrEMBL
	ENSSSCT00015105492.1	UniProtKB/TrEMBL
	ENSSSCT00015105522.1	UniProtKB/TrEMBL
	ENSSSCT00015105558.1	UniProtKB/TrEMBL
	ENSSSCT00025023795.1	UniProtKB/TrEMBL
	ENSSSCT00025023817.1	UniProtKB/TrEMBL
	ENSSSCT00025023834.1	UniProtKB/TrEMBL
	ENSSSCT00025023916.1	UniProtKB/TrEMBL
	ENSSSCT00025024041.1	UniProtKB/TrEMBL
	ENSSSCT00025024054.1	UniProtKB/TrEMBL
	ENSSSCT00025024088.1	UniProtKB/TrEMBL
	ENSSSCT00025024115.1	UniProtKB/TrEMBL
	ENSSSCT00030052918.1	UniProtKB/TrEMBL
	ENSSSCT00035083204.1	UniProtKB/TrEMBL
	ENSSSCT00035083250.1	UniProtKB/TrEMBL
	ENSSSCT00035083254.1	UniProtKB/TrEMBL
	ENSSSCT00035083272.1	UniProtKB/TrEMBL
	ENSSSCT00035083274.1	UniProtKB/TrEMBL
	ENSSSCT00035083278.1	UniProtKB/TrEMBL
	ENSSSCT00035083281.1	UniProtKB/TrEMBL
	ENSSSCT00035083283.1	UniProtKB/TrEMBL
	ENSSSCT00040075918.1	UniProtKB/TrEMBL
	ENSSSCT00040076538.1	UniProtKB/TrEMBL
	ENSSSCT00040076577.1	UniProtKB/TrEMBL
	ENSSSCT00040077078.1	UniProtKB/TrEMBL
	ENSSSCT00040077135.1	UniProtKB/TrEMBL
	ENSSSCT00040077193.1	UniProtKB/TrEMBL
	ENSSSCT00040077241.1	UniProtKB/TrEMBL
	ENSSSCT00040077292.1	UniProtKB/TrEMBL
	ENSSSCT00045008615.1	UniProtKB/TrEMBL
	ENSSSCT00045008650.1	UniProtKB/TrEMBL
	ENSSSCT00045008659.1	UniProtKB/TrEMBL
	ENSSSCT00045008677.1	UniProtKB/TrEMBL
	ENSSSCT00045008680.1	UniProtKB/TrEMBL
	ENSSSCT00045008684.1	UniProtKB/TrEMBL
	ENSSSCT00045008686.1	UniProtKB/TrEMBL
	ENSSSCT00045008687.1	UniProtKB/TrEMBL
	ENSSSCT00050049680.1	UniProtKB/TrEMBL
	ENSSSCT00050049682.1	UniProtKB/TrEMBL
	ENSSSCT00050049688.1	UniProtKB/TrEMBL
	ENSSSCT00050049692.1	UniProtKB/TrEMBL
	ENSSSCT00050049715.1	UniProtKB/TrEMBL
	ENSSSCT00050049723.1	UniProtKB/TrEMBL
	ENSSSCT00050049734.1	UniProtKB/TrEMBL
	ENSSSCT00050049738.1	UniProtKB/TrEMBL
	ENSSSCT00055024707.1	UniProtKB/TrEMBL
	ENSSSCT00055024757.1	UniProtKB/TrEMBL
	ENSSSCT00055024780.1	UniProtKB/TrEMBL
	ENSSSCT00055024947.1	UniProtKB/TrEMBL
	ENSSSCT00055025061.1	UniProtKB/TrEMBL
	ENSSSCT00055025137.1	UniProtKB/TrEMBL
	ENSSSCT00055025210.1	UniProtKB/TrEMBL
	ENSSSCT00060096986.1	UniProtKB/TrEMBL
	ENSSSCT00060097064.1	UniProtKB/TrEMBL
	ENSSSCT00060097196.1	UniProtKB/TrEMBL
	ENSSSCT00060097228.1	UniProtKB/TrEMBL
	ENSSSCT00060097248.1	UniProtKB/TrEMBL
	ENSSSCT00060097272.1	UniProtKB/TrEMBL
	ENSSSCT00060097296.1	UniProtKB/TrEMBL
	ENSSSCT00065044081.1	UniProtKB/TrEMBL
	ENSSSCT00065044088.1	UniProtKB/TrEMBL
	ENSSSCT00065044092.1	UniProtKB/TrEMBL
	ENSSSCT00065044133.1	UniProtKB/TrEMBL
	ENSSSCT00065044193.1	UniProtKB/TrEMBL
	ENSSSCT00065044198.1	UniProtKB/TrEMBL
	ENSSSCT00065044209.1	UniProtKB/TrEMBL
	ENSSSCT00065044223.1	UniProtKB/TrEMBL
	ENSSSCT00070014798.1	UniProtKB/TrEMBL
	ENSSSCT00070014803.1	UniProtKB/TrEMBL
	ENSSSCT00070014817.1	UniProtKB/TrEMBL
	ENSSSCT00070014825.1	UniProtKB/TrEMBL
	ENSSSCT00070014831.1	UniProtKB/TrEMBL
	ENSSSCT00070014842.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.3860.10	UniProtKB/TrEMBL
InterPro	DAACS	UniProtKB/TrEMBL
	Na-dicarboxylate_symporter	UniProtKB/TrEMBL
	Na-dicarboxylate_symporter_CS	UniProtKB/TrEMBL
	Na:dicarbo_symporter_sf	UniProtKB/TrEMBL
KEGG Report	ssc:100516047	UniProtKB/TrEMBL
NCBI Gene	SLC1A3	ENTREZGENE
PANTHER	EXCITATORY AMINO ACID TRANSPORTER 1	UniProtKB/TrEMBL
	SODIUM/DICARBOXYLATE SYMPORTER-RELATED	UniProtKB/TrEMBL
Pfam	SDF	UniProtKB/TrEMBL
PRINTS	EDTRNSPORT	UniProtKB/TrEMBL
PROSITE	NA_DICARBOXYL_SYMP_1	UniProtKB/TrEMBL
	NA_DICARBOXYL_SYMP_2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF118215	UniProtKB/TrEMBL
UniProt	A0A286ZJ73_PIG	UniProtKB/TrEMBL
	A0A287ADP4	ENTREZGENE
	A0A287BI76	ENTREZGENE
	A0A287BP75_PIG	UniProtKB/TrEMBL
	A0A4X1TA30	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1TA36	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1TA87_PIG	UniProtKB/TrEMBL
	A0A4X1TAS8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0K6X1_PIG	UniProtKB/TrEMBL
	A0A8D0Q5U2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0Q600_PIG	UniProtKB/TrEMBL
	A0A8D0R329_PIG	UniProtKB/TrEMBL
	A0A8D0UJQ8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1AI06_PIG	UniProtKB/TrEMBL
	A0A8D1AVR0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1WMV7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8W4F8R6_PIG	UniProtKB/TrEMBL
	F1SNA0	ENTREZGENE
	H6TB54	ENTREZGENE
	H6TB55	ENTREZGENE
	H6TB56	ENTREZGENE
UniProt Secondary	A0A287ADP4	UniProtKB/TrEMBL
	A0A287BI76	UniProtKB/TrEMBL
	F1SNA0	UniProtKB/TrEMBL
VGNC ID	VGNC:92965	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

RGD Manual Annotations