BMP15 (bone morphogenetic protein 15) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: BMP15 (bone morphogenetic protein 15) Sus scrofa
Analyze
Symbol: BMP15
Name: bone morphogenetic protein 15
RGD ID: 13898190
Description: ENCODES a protein that exhibits growth factor activity (inferred); INVOLVED IN positive regulation of transcription, DNA-templated (ortholog); ASSOCIATED WITH amenorrhea (ortholog); autistic disorder (ortholog); ovarian dysgenesis 2 (ortholog); FOUND IN cytoplasm (ortholog); INTERACTS WITH N-acetyl-L-cysteine; zearalenone
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: GDF9B; growth differentiation factor 9B
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX44,613,122 - 44,620,575 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X44,613,122 - 44,620,575 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X49,544,707 - 49,550,877 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:12047238   PMID:12873222   PMID:15175238   PMID:17222994   PMID:19359354   PMID:24313324  


Genomics

Comparative Map Data
BMP15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX44,613,122 - 44,620,575 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X44,613,122 - 44,620,575 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X49,544,707 - 49,550,877 (+)NCBISscrofa10.2Sscrofa10.2susScr3
BMP15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 EnsemblX50,910,735 - 50,916,641 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p13 EnsemblX50,910,784 - 50,916,607 (+)EnsemblGRCh38hg38GRCh38
GRCh38X50,910,735 - 50,916,641 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37X50,653,735 - 50,659,641 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X50,670,524 - 50,676,347 (+)NCBINCBI36hg18NCBI36
Build 34X50,486,819 - 50,492,643NCBI
CeleraX54,697,190 - 54,703,096 (+)NCBI
Cytogenetic MapXp11.22NCBI
HuRefX48,097,311 - 48,103,406 (+)NCBIHuRef
CHM1_1X50,733,338 - 50,739,244 (+)NCBICHM1_1
Bmp15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X6,226,108 - 6,232,778 (-)NCBIGRCm39mm39
GRCm39 EnsemblX6,226,161 - 6,232,775 (-)Ensembl
GRCm38X6,314,054 - 6,320,724 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX6,314,107 - 6,320,721 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X5,891,224 - 5,897,841 (-)NCBIGRCm37mm9NCBIm37
MGSCv36X5,489,598 - 5,496,190 (-)NCBImm8
CeleraX5,090,389 - 5,097,007 (+)NCBICelera
Cytogenetic MapXA1.1NCBI
cM MapX2.81NCBI
Bmp15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2X16,169,123 - 16,174,187 (+)NCBI
Rnor_6.0 EnsemblX17,016,778 - 17,023,418 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0X17,016,831 - 17,021,894 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X17,797,360 - 17,802,423 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X29,003,933 - 29,008,996 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X29,057,401 - 29,062,465 (-)NCBI
CeleraX16,238,220 - 16,243,279 (+)NCBICelera
Cytogenetic MapXq12NCBI
Bmp15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555432,304,112 - 2,345,376 (+)NCBIChiLan1.0ChiLan1.0
BMP15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1X50,783,925 - 50,789,830 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX50,783,925 - 50,791,369 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0X43,071,039 - 43,076,941 (+)NCBIMhudiblu_PPA_v0panPan3
BMP15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X43,765,126 - 43,771,277 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX43,764,777 - 43,771,287 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX18,142,461 - 18,147,409 (+)NCBI
ROS_Cfam_1.0X43,885,645 - 43,890,593 (+)NCBI
UNSW_CanFamBas_1.0X43,877,414 - 43,882,362 (+)NCBI
UU_Cfam_GSD_1.0X43,972,394 - 43,977,342 (+)NCBI
Bmp15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X36,301,604 - 36,318,300 (+)NCBI
SpeTri2.0NW_004936873109,156 - 115,498 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BMP15
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X47,713,434 - 47,722,818 (+)NCBI
ChlSab1.1 EnsemblX47,713,957 - 47,719,777 (+)Ensembl
Bmp15
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248933,014,535 - 3,020,862 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000013461   ⟹   ENSSSCP00000013101
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX44,613,122 - 44,620,575 (+)Ensembl
RefSeq Acc Id: NM_001005155   ⟹   NP_001005155
RefSeq Status: VALIDATED
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X44,613,122 - 44,620,575 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_001005155   ⟸   NM_001005155
- Sequence:
RefSeq Acc Id: ENSSSCP00000013101   ⟸   ENSSSCT00000013461
Protein Domains
TGF_BETA_2


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000012310 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00070004233 UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000013101 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00070006666 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000013461 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00070008097 UniProtKB/TrEMBL
Gene3D-CATH 2.10.90.10 UniProtKB/TrEMBL
InterPro BMP-15 UniProtKB/TrEMBL
  Cystine-knot_cytokine UniProtKB/TrEMBL
  TGF-b_C UniProtKB/TrEMBL
  TGF-beta-rel UniProtKB/TrEMBL
  TGFb_CS UniProtKB/TrEMBL
KEGG Report ssc:448811 UniProtKB/TrEMBL
NCBI Gene BMP15 ENTREZGENE
PANTHER PTHR11848 UniProtKB/TrEMBL
  PTHR11848:SF22 UniProtKB/TrEMBL
Pfam TGF_beta UniProtKB/TrEMBL
PROSITE TGF_BETA_1 UniProtKB/TrEMBL
  TGF_BETA_2 UniProtKB/TrEMBL
SMART TGFB UniProtKB/TrEMBL
Superfamily-SCOP SSF57501 UniProtKB/TrEMBL
UniProt A0A4X1SUJ1_PIG UniProtKB/TrEMBL
  F1RV73_PIG UniProtKB/TrEMBL
  G9BFT8_PIG UniProtKB/TrEMBL
  Q8WMY6_PIG UniProtKB/TrEMBL
UniProt Secondary G9BFT7 UniProtKB/TrEMBL
VGNC ID VGNC:85840 ENTREZGENE