PSMC1 (proteasome 26S subunit, ATPase 1)

Gene: PSMC1 (proteasome 26S subunit, ATPase 1) Sus scrofa

Analyze

Symbol:

PSMC1

Name:

proteasome 26S subunit, ATPase 1

RGD ID:

13898097

Description:

ENCODES a protein that exhibits TBP-class protein binding (ortholog); INVOLVED IN positive regulation of proteasomal protein catabolic process (inferred); proteasome-mediated ubiquitin-dependent protein catabolic process (inferred); proteolysis (inferred); ASSOCIATED WITH achondrogenesis type IA (ortholog); genetic disease (ortholog); neurodevelopmental disorder with poor growth, spastic tetraplegia, and hearing loss (ortholog); FOUND IN cytosol (inferred); nucleoplasm (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

26S protease regulatory subunit 4; 26S proteasome regulatory subunit 4; protease (prosome, macropain) 26S subunit, ATPase 1; proteasome (prosome, macropain) 26S subunit, ATPase, 1

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	112,027,921 - 112,041,489 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	112,027,904 - 112,041,360 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	118,594,314 - 118,607,772 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

achondrogenesis type IA (ISO)

genetic disease (ISO)

neurodevelopmental disorder with poor growth, spastic tetraplegia, and hearing loss (ISO)

prostate cancer (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

positive regulation of proteasomal protein catabolic process (IEA)

proteasome-mediated ubiquitin-dependent protein catabolic process (IBA,IEA)

proteolysis (IEA)

Cellular Component

cytosol (IEA)

nucleoplasm (IEA)

nucleus (IEA)

proteasome accessory complex (IEA)

proteasome complex (IEA)

proteasome regulatory particle (IEA)

proteasome regulatory particle, base subcomplex (IBA,IEA)

Molecular Function

ATP binding (IEA)

ATP hydrolysis activity (IEA)

peptidase activity (IEA)

proteasome-activating activity (IBA,IEA)

protein binding (ISO)

TBP-class protein binding (ISO)

References

Additional References at PubMed

PMID:14681463	PMID:15679890	PMID:17145712	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

PSMC1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	112,027,921 - 112,041,489 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	112,027,904 - 112,041,360 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	118,594,314 - 118,607,772 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PSMC1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	90,256,553 - 90,275,429 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	90,256,527 - 90,275,429 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	90,722,897 - 90,741,773 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	89,792,647 - 89,808,719 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	14	89,792,646 - 89,808,719	NCBI
Celera	14	70,770,035 - 70,786,113 (+)	NCBI		Celera
Cytogenetic Map	14	q32.11	NCBI
HuRef	14	70,897,288 - 70,913,368 (+)	NCBI		HuRef
CHM1_1	14	90,661,102 - 90,677,177 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	84,478,491 - 84,499,697 (+)	NCBI		T2T-CHM13v2.0

Psmc1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	100,076,461 - 100,089,623 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	100,076,413 - 100,089,664 (+)	Ensembl		GRCm39 Ensembl
GRCm38	12	100,110,202 - 100,123,364 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	100,110,154 - 100,123,405 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	101,348,412 - 101,361,574 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	100,511,252 - 100,524,414 (+)	NCBI		MGSCv36	mm8
Celera	12	101,336,798 - 101,349,996 (+)	NCBI		Celera
Cytogenetic Map	12	E	NCBI
cM Map	12	50.43	NCBI

Psmc1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	125,122,497 - 125,134,859 (+)	NCBI		GRCr8
mRatBN7.2	6	119,392,833 - 119,405,233 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	119,392,855 - 119,410,123 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	119,555,520 - 119,567,890 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	119,852,325 - 119,864,695 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	119,187,189 - 119,199,560 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	124,123,283 - 124,135,644 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	124,123,228 - 124,135,658 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	133,350,578 - 133,362,939 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	124,380,976 - 124,393,338 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	124,384,722 - 124,397,084 (+)	NCBI
Celera	6	116,922,860 - 116,935,222 (+)	NCBI		Celera
Cytogenetic Map	6	q32	NCBI

Psmc1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955438	12,704,691 - 12,721,050 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955438	12,705,328 - 12,721,050 (+)	NCBI	ChiLan1.0	ChiLan1.0

PSMC1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	91,400,672 - 91,416,861 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	90,617,193 - 90,633,367 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	70,873,846 - 70,889,988 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	90,225,405 - 90,241,638 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	90,225,405 - 90,241,641 (+)	Ensembl	panpan1.1		panPan2

PSMC1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	61,272,363 - 61,285,886 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	61,272,363 - 61,285,886 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	60,851,941 - 60,865,464 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	61,544,550 - 61,558,080 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	61,544,577 - 61,558,051 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	61,225,967 - 61,239,658 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	61,274,899 - 61,288,618 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	61,603,196 - 61,616,721 (+)	NCBI		UU_Cfam_GSD_1.0

Psmc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	14,600,035 - 14,613,399 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936488	17,455,461 - 17,469,527 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936488	17,455,612 - 17,468,933 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PSMC1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	67,979,449 - 67,995,103 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666053	55,265,330 - 55,281,008 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Psmc1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624734	12,153,919 - 12,174,650 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in PSMC1
665 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium	6	1	1	4	2	19	2	2	3
Low	4	3	2	1		4		1
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001244151	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021098047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000061	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK235262	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK238210	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK345545	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK389202	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK391703	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY609681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CT737375	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FD588173	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000002703 ⟹ ENSSSCP00000002634

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	112,027,921 - 112,041,489 (+)	Ensembl

RefSeq Acc Id:

NM_001244151 ⟹ NP_001231080

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	7	112,027,904 - 112,041,360 (+)	NCBI

Sequence:

show sequence

GGCAGTGCACTTCCGGCAGCAGCGGCTCGAGCGGCCAAAGCAAGATGGGTCAAAGTCAGAGTGG
TGGTCATGGCCCTGGAGGTGGCAAGAAGGATGACAAGGATAAGAAAAAGAAATACGAACCCCCT
GTACCAACTAGAGTGGGGAAGAAGAAGAAGAAAACAAAGGGACCAGATGCTGCCAGCAAACTGC
CCCTGGTGACACCTCACACTCAGTGCCGGTTAAAATTACTGAAGTTAGAGAGAATTAAAGACTA
TCTTCTCATGGAAGAAGAATTCATTAGAAATCAAGAACAAATGAAGCCTTTAGAAGAAAAGCAA
GAGGAGGAGAGATCGAAGGTGGATGATCTGAGGGGGACCCCAATGTCAGTGGGAACCTTGGAGG
AGATCATTGATGACAATCATGCCATCGTGTCCACGTCTGTGGGCTCGGAACACTACGTCAGCAT
CCTTTCATTTGTAGACAAGGATCTGCTGGAACCGGGCTGCTCTGTCCTGCTCAACCATAAGGTG
CATGCCGTGATAGGGGTGCTCATGGATGACACAGATCCCTTGGTCACAGTGATGAAGGTGGAGA
AGGCCCCCCAGGAGACCTATGCTGATATTGGGGGGCTGGACAACCAGATCCAGGAGATCAAGGA
GTCTGTGGAGCTTCCTCTCACTCATCCTGAGTATTATGAAGAGATGGGTATAAAGCCCCCGAAG
GGGGTCATTCTCTACGGCCCACCCGGCACAGGTAAAACCTTACTAGCCAAAGCAGTAGCAAACC
AAACCTCGGCCACTTTCTTGAGAGTCGTCGGCTCTGAGCTTATTCAGAAGTACCTCGGTGACGG
GCCCAAACTCGTTCGGGAACTGTTCCGAGTTGCTGAAGAACATGCACCGTCCATCGTGTTTATT
GATGAAATCGATGCTATTGGGACGAAAAGGTACGACTCAAATTCTGGGGGTGAGAGAGAAATTC
AGCGAACAATGTTGGAACTGCTGAACCAGTTGGATGGATTTGATTCAAGGGGAGACGTGAAAGT
CATCATGGCCACAAACCGAATAGAGACTTTGGACCCAGCACTTATCAGACCAGGCCGCATCGAC
AGGAAGATCGAGTTTCCCCTGCCCGACGAGAAGACGAAGAAGCGCATCTTTCAGATCCACACGA
GCAGGATGACACTGGCCGACGATGTCACCCTGGACGACTTGATCATGGCCAAAGATGACCTCTC
CGGTGCCGACATCAAGGCAATCTGTACAGAAGCTGGTCTGATGGCCTTGAGAGAACGTAGGATG
AAAGTAACAAATGAAGACTTCAAAAAATCTAAAGAAAATGTTCTTTATAAAAAACAAGAAGGCA
CCCCTGAGGGGCTCTATCTGTAGTGGACCACAGCTGCCTTCCAGGAAATGGTGGGAGCGTCCTG
GGCCCCAGAGGGGGAGGGGGGGAAGCTGCCAGCCCGGAGTCCATTCCCAGTTGTCTTTACTAGC
AAACGTCTCGTGTACCTTGTGCCCGGCAGGCTGCCTTCACGTTGGTCATGTGCTCTCTTCCCAA
TAAAATGTGCTCTTTCTCAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_021098047 ⟹ XP_020953706

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	7	112,028,025 - 112,041,360 (+)	NCBI

Sequence:

show sequence

GGCTGGTGGAGGCACTCGGGTCAAAGTCAGAGTGGTGGTCATGGCCCTGGAGGTGGCAAGAAGG
ATGACAAGGATAAGAAAAAGAAATACGAACCCCCTGTACCAACTAGAGTGGGGAAGAAGAAGAA
GAAAACAAAGGGACCAGATGCTGCCAGCAAACTGCCCCTGGTGACACCTCACACTCAGTGCCGG
TTAAAATTACTGAAGTTAGAGAGAATTAAAGACTATCTTCTCATGGAAGAAGAATTCATTAGAA
ATCAAGAACAAATGAAGCCTTTAGAAGAAAAGCAAGAGGAGGAGAGATCGAAGGTGGATGATCT
GAGGGGGACCCCAATGTCAGTGGGAACCTTGGAGGAGATCATTGATGACAATCATGCCATCGTG
TCCACGTCTGTGGGCTCGGAACACTACGTCAGCATCCTTTCATTTGTAGACAAGGATCTGCTGG
AACCGGGCTGCTCTGTCCTGCTCAACCATAAGGTGCATGCCGTGATAGGGGTGCTCATGGATGA
CACAGATCCCTTGGTCACAGTGATGAAGGTGGAGAAGGCCCCCCAGGAGACCTATGCTGATATT
GGGGGGCTGGACAACCAGATCCAGGAGATCAAGGAGTCTGTGGAGCTTCCTCTCACTCATCCTG
AGTATTATGAAGAGATGGGTATAAAGCCCCCGAAGGGGGTCATTCTCTACGGCCCACCCGGCAC
AGGTAAAACCTTACTAGCCAAAGCAGTAGCAAACCAAACCTCGGCCACTTTCTTGAGAGTCGTC
GGCTCTGAGCTTATTCAGAAGTACCTCGGTGACGGGCCCAAACTCGTTCGGGAACTGTTCCGAG
TTGCTGAAGAACATGCACCGTCCATCGTGTTTATTGATGAAATCGATGCTATTGGGACGAAAAG
GTACGACTCAAATTCTGGGGGTGAGAGAGAAATTCAGCGAACAATGTTGGAACTGCTGAACCAG
TTGGATGGATTTGATTCAAGGGGAGACGTGAAAGTCATCATGGCCACAAACCGAATAGAGACTT
TGGACCCAGCACTTATCAGACCAGGCCGCATCGACAGGAAGATCGAGTTTCCCCTGCCCGACGA
GAAGACGAAGAAGCGCATCTTTCAGATCCACACGAGCAGGATGACACTGGCCGACGATGTCACC
CTGGACGACTTGATCATGGCCAAAGATGACCTCTCCGGTGCCGACATCAAGGCAATCTGTACAG
AAGCTGGTCTGATGGCCTTGAGAGAACGTAGGATGAAAGTAACAAATGAAGACTTCAAAAAATC
TAAAGAAAATGTTCTTTATAAAAAACAAGAAGGCACCCCTGAGGGGCTCTATCTGTAGTGGACC
ACAGCTGCCTTCCAGGAAATGGTGGGAGCGTCCTGGGCCCCAGAGGGGGAGGGGGGGAAGCTGC
CAGCCCGGAGTCCATTCCCAGTTGTCTTTACTAGCAAACGTCTCGTGTACCTTGTGCCCGGCAG
GCTGCCTTCACGTTGGTCATGTGCTCTCTTCCCAATAAAATGTGCTCTTTCTCA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001231080	(Get FASTA)	NCBI Sequence Viewer
	XP_020953706	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000002634
	ENSSSCP00000002634.2
	ENSSSCP00005029086.1
	ENSSSCP00015007125.1
	ENSSSCP00015007146.1
	ENSSSCP00025001016.1
	ENSSSCP00030047767.1
	ENSSSCP00035024676.1
	ENSSSCP00040011994.1
	ENSSSCP00045002448.1
	ENSSSCP00050007909.1
	ENSSSCP00050007930.1
	ENSSSCP00055035114.1
	ENSSSCP00060021346.1
	ENSSSCP00065024885.1
	ENSSSCP00070005986.1
	ENSSSCP00070005991.1
	ENSSSCP00070005998.1

RefSeq Acc Id:

NP_001231080 ⟸ NM_001244151

- UniProtKB:

F2Z5J1 (UniProtKB/TrEMBL), A0A4X1ST93 (UniProtKB/TrEMBL), A0A8D0JS29 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGQSQSGGHGPGGGKKDDKDKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLK
LERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVG
SEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDN
QIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI
QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFD
SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLI
MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL

hide sequence

RefSeq Acc Id:	XP_020953706 ⟸ XM_021098047
- Peptide Label:	isoform X1
- UniProtKB:	A0A480ISP4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILS FVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESV ELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPK LVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGA DIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL hide sequence

RefSeq Acc Id:

ENSSSCP00000002634 ⟸ ENSSSCT00000002703

Protein Domains

AAA+ ATPase

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000002433	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005029437	UniProtKB/TrEMBL
	ENSSSCG00015013564	UniProtKB/TrEMBL
	ENSSSCG00025002205	UniProtKB/TrEMBL
	ENSSSCG00030073827	UniProtKB/TrEMBL
	ENSSSCG00035046087	UniProtKB/TrEMBL
	ENSSSCG00040021129	UniProtKB/TrEMBL
	ENSSSCG00045002482	UniProtKB/TrEMBL
	ENSSSCG00050014143	UniProtKB/TrEMBL
	ENSSSCG00055022255	UniProtKB/TrEMBL
	ENSSSCG00060036834	UniProtKB/TrEMBL
	ENSSSCG00065041834	UniProtKB/TrEMBL
	ENSSSCG00070003896	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000002703	ENTREZGENE
	ENSSSCT00000002703.4	UniProtKB/TrEMBL
	ENSSSCT00005047240.1	UniProtKB/TrEMBL
	ENSSSCT00015017988.1	UniProtKB/TrEMBL
	ENSSSCT00015018037.1	UniProtKB/TrEMBL
	ENSSSCT00025002842.1	UniProtKB/TrEMBL
	ENSSSCT00030103435.1	UniProtKB/TrEMBL
	ENSSSCT00035061265.1	UniProtKB/TrEMBL
	ENSSSCT00040028559.1	UniProtKB/TrEMBL
	ENSSSCT00045003873.1	UniProtKB/TrEMBL
	ENSSSCT00050019087.1	UniProtKB/TrEMBL
	ENSSSCT00050019120.1	UniProtKB/TrEMBL
	ENSSSCT00055044089.1	UniProtKB/TrEMBL
	ENSSSCT00060049906.1	UniProtKB/TrEMBL
	ENSSSCT00065057236.1	UniProtKB/TrEMBL
	ENSSSCT00070007312.1	UniProtKB/TrEMBL
	ENSSSCT00070007318.1	UniProtKB/TrEMBL
	ENSSSCT00070007325.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.8.60	UniProtKB/TrEMBL
	2.40.50.140	UniProtKB/TrEMBL
	3.40.50.300	UniProtKB/TrEMBL
InterPro	AAA+_ATPase	UniProtKB/TrEMBL
	AAA_lid_3	UniProtKB/TrEMBL
	ATPase_AAA_core	UniProtKB/TrEMBL
	ATPase_AAA_CS	UniProtKB/TrEMBL
	NA-bd_OB-fold	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	Prot_ATP_ID_OB	UniProtKB/TrEMBL
KEGG Report	ssc:100155274	UniProtKB/TrEMBL
NCBI Gene	PSMC1	ENTREZGENE
PANTHER	26S PROTEASOME REGULATORY SUBUNIT	UniProtKB/TrEMBL
	26S PROTEASOME REGULATORY SUBUNIT 4	UniProtKB/TrEMBL
Pfam	AAA	UniProtKB/TrEMBL
	AAA_lid_3	UniProtKB/TrEMBL
	Prot_ATP_ID_OB	UniProtKB/TrEMBL
PROSITE	AAA	UniProtKB/TrEMBL
SMART	AAA	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
UniProt	A0A480ISP4	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1ST93	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0JS29	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0MT74_PIG	UniProtKB/TrEMBL
	A0A8D1LGD8_PIG	UniProtKB/TrEMBL
	F2Z5J1	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:91912	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM