LOC100522686 (olfactory receptor 2B11-like) - Rat Genome Database

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Pathways
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Gene: LOC100522686 (olfactory receptor 2B11-like) Sus scrofa
Analyze
Symbol: LOC100522686
Name: olfactory receptor 2B11-like
RGD ID: 13892290
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1722,234,166 - 22,235,110 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2724,178,144 - 24,179,088 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)
plasma membrane  (IBA,IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Variants

.
Variants in LOC100522686
37 total Variants

Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003128233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_003128233   ⟹   XP_003128281
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1722,234,166 - 22,235,110 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_003128281   ⟸   XM_003128233
- UniProtKB: F1S1Q4 (UniProtKB/TrEMBL),   A0A4X1VJ80 (UniProtKB/TrEMBL),   A0A8D0W890 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000001211 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005003155 UniProtKB/TrEMBL
  ENSSSCG00015054912 UniProtKB/TrEMBL
  ENSSSCG00030025892 UniProtKB/TrEMBL
  ENSSSCG00035028760 UniProtKB/TrEMBL
  ENSSSCG00040005371 UniProtKB/TrEMBL
  ENSSSCG00045007678 UniProtKB/TrEMBL
  ENSSSCG00050031644 UniProtKB/TrEMBL
  ENSSSCG00055006203 UniProtKB/TrEMBL
  ENSSSCG00060029571 UniProtKB/TrEMBL
  ENSSSCG00070024875 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000001309 ENTREZGENE
  ENSSSCT00000001309.4 UniProtKB/TrEMBL
  ENSSSCT00005004701.1 UniProtKB/TrEMBL
  ENSSSCT00015073103.1 UniProtKB/TrEMBL
  ENSSSCT00030036155.1 UniProtKB/TrEMBL
  ENSSSCT00035038029.1 UniProtKB/TrEMBL
  ENSSSCT00040007095.1 UniProtKB/TrEMBL
  ENSSSCT00045012817.1 UniProtKB/TrEMBL
  ENSSSCT00050042539.1 UniProtKB/TrEMBL
  ENSSSCT00055012011.1 UniProtKB/TrEMBL
  ENSSSCT00060039950.1 UniProtKB/TrEMBL
  ENSSSCT00070049705.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report ssc:100522686 UniProtKB/TrEMBL
NCBI Gene LOC100522686 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A4X1VJ80 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0HW99_PIG UniProtKB/TrEMBL
  A0A8D0P6D7_PIG UniProtKB/TrEMBL
  A0A8D0W890 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0ZAL4_PIG UniProtKB/TrEMBL
  A0A8D1BVA4_PIG UniProtKB/TrEMBL
  F1S1Q4 ENTREZGENE, UniProtKB/TrEMBL