FKBP14 (FKBP prolyl isomerase 14) - Rat Genome Database
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Gene: FKBP14 (FKBP prolyl isomerase 14) Sus scrofa
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Symbol: FKBP14
Name: FKBP prolyl isomerase 14
RGD ID: 13888252
Description: ENCODES a protein that exhibits calcium ion binding (inferred); peptidyl-prolyl cis-trans isomerase activity (inferred); INVOLVED IN protein peptidyl-prolyl isomerization (inferred); ASSOCIATED WITH congenital muscular dystrophy (ortholog); Ehlers-Danlos syndrome kyphoscoliotic type 2 (ortholog); genetic disease (ortholog)
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: FK506 binding protein 14; peptidyl-prolyl cis-trans isomerase FKBP14
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1842,901,173 - 42,913,884 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11842,903,100 - 42,913,609 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21847,295,898 - 47,305,208 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References
Additional References at PubMed
PMID:14681463   PMID:15679890   PMID:17407547  


Genomics

Comparative Map Data
FKBP14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1842,901,173 - 42,913,884 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11842,903,100 - 42,913,609 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21847,295,898 - 47,305,208 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FKBP14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl730,010,587 - 30,026,684 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl730,010,587 - 30,026,702 (-)EnsemblGRCh38hg38GRCh38
GRCh38730,010,587 - 30,026,702 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37730,050,203 - 30,066,318 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36730,019,409 - 30,032,793 (-)NCBINCBI36hg18NCBI36
Build 34729,826,123 - 29,839,508NCBI
Celera730,042,275 - 30,055,659 (-)NCBI
Cytogenetic Map7p14.3NCBI
HuRef729,932,008 - 29,948,256 (-)NCBIHuRef
CHM1_1730,050,309 - 30,066,527 (-)NCBICHM1_1
CRA_TCAGchr7v2730,100,028 - 30,116,246 (-)NCBI
Fkbp14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39654,554,589 - 54,574,329 (-)NCBIGRCm39mm39
GRCm39 Ensembl654,554,589 - 54,574,293 (-)Ensembl
GRCm38654,577,602 - 54,597,344 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl654,577,604 - 54,597,308 (-)EnsemblGRCm38mm10GRCm38
MGSCv37654,527,599 - 54,543,122 (-)NCBIGRCm37mm9NCBIm37
MGSCv36654,507,183 - 54,522,706 (-)NCBImm8
Celera655,106,438 - 55,121,956 (-)NCBICelera
Cytogenetic Map6B3NCBI
Fkbp14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2483,705,531 - 83,721,515 (-)NCBI
Rnor_6.0 Ensembl484,753,633 - 84,768,249 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0484,753,628 - 84,768,314 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04149,413,598 - 149,428,281 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4482,985,646 - 83,000,392 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1483,270,270 - 83,285,014 (-)NCBI
Celera478,576,056 - 78,590,677 (-)NCBICelera
Cytogenetic Map4q24NCBI
Fkbp14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541031,309,525 - 31,325,544 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541031,313,637 - 31,325,544 (-)NCBIChiLan1.0ChiLan1.0
FKBP14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1730,758,165 - 30,772,640 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl730,758,165 - 30,772,640 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0730,641,413 - 30,656,507 (-)NCBIMhudiblu_PPA_v0panPan3
Fkbp14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049364786,296,598 - 6,310,405 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FKBP14
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12128,352,196 - 28,367,910 (+)NCBI
ChlSab1.1 Ensembl2128,352,402 - 28,367,147 (+)Ensembl
Fkbp14
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624739770,775 - 791,251 (+)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 1 1
Low 9 4 3 5 2 23 2 2 3
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000056572   ⟹   ENSSSCP00000041976
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1842,902,728 - 42,912,741 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000057687   ⟹   ENSSSCP00000036519
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1842,901,173 - 42,913,884 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000067137   ⟹   ENSSSCP00000073599
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1842,903,111 - 42,912,741 (+)Ensembl
RefSeq Acc Id: NM_001244527   ⟹   NP_001231456
RefSeq Status: VALIDATED
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11842,903,100 - 42,913,609 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001231456 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001231456   ⟸   NM_001244527
- Peptide Label: precursor
- UniProtKB: A0A286ZXU4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000041976   ⟸   ENSSSCT00000056572
RefSeq Acc Id: ENSSSCP00000036519   ⟸   ENSSSCT00000057687
RefSeq Acc Id: ENSSSCP00000073599   ⟸   ENSSSCT00000067137
Protein Domains
EF-hand   PPIase FKBP-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000037575 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00070008810 UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000036519 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00000041976 UniProtKB/TrEMBL
  ENSSSCP00000073599 UniProtKB/TrEMBL
  ENSSSCP00070014148 UniProtKB/TrEMBL
  ENSSSCP00070014157 UniProtKB/TrEMBL
  ENSSSCP00070014167 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000056572 UniProtKB/TrEMBL
  ENSSSCT00000057687 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00000067137 UniProtKB/TrEMBL
  ENSSSCT00070017094 UniProtKB/TrEMBL
  ENSSSCT00070017104 UniProtKB/TrEMBL
  ENSSSCT00070017116 UniProtKB/TrEMBL
InterPro EF-hand-dom_pair UniProtKB/TrEMBL
  EF_Hand_1_Ca_BS UniProtKB/TrEMBL
  EF_hand_dom UniProtKB/TrEMBL
  PPIase_FKBP_dom UniProtKB/TrEMBL
KEGG Report ssc:100514551 UniProtKB/TrEMBL
NCBI Gene FKBP14 ENTREZGENE
Pfam EF-hand_7 UniProtKB/TrEMBL
  FKBP_C UniProtKB/TrEMBL
PROSITE EF_HAND_1 UniProtKB/TrEMBL
  EF_HAND_2 UniProtKB/TrEMBL
  FKBP_PPIASE UniProtKB/TrEMBL
Superfamily-SCOP SSF47473 UniProtKB/TrEMBL
UniProt A0A286ZXU4 ENTREZGENE, UniProtKB/TrEMBL
  A0A287ADU2_PIG UniProtKB/TrEMBL
  A0A4X1TCX1_PIG UniProtKB/TrEMBL
  A0A4X1TH42_PIG UniProtKB/TrEMBL
  A0A5G2RM67_PIG UniProtKB/TrEMBL
VGNC ID VGNC:88144 ENTREZGENE