LOC110258257 (olfactory receptor 10AG1-like) - Rat Genome Database

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Gene: LOC110258257 (olfactory receptor 10AG1-like) Sus scrofa
Analyze
Symbol: LOC110258257
Name: olfactory receptor 10AG1-like
RGD ID: 13885294
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Dog
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position: No map positions available.


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)
plasma membrane  (IBA,IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
LOC110258257
(Sus scrofa - pig)		 No map positions available.
OR10AG1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381155,965,755 - 55,969,945 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1155,965,755 - 55,969,945 (-)EnsemblGRCh38hg38GRCh38
GRCh371155,733,231 - 55,737,421 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361155,491,610 - 55,492,515 (-)NCBINCBI36Build 36hg18NCBI36
Build 341155,491,609 - 55,492,515NCBI
Celera1153,075,208 - 53,076,113 (-)NCBICelera
Cytogenetic Map11q12.1NCBI
HuRef1152,064,025 - 52,064,930 (-)NCBIHuRef
CHM1_11155,600,594 - 55,601,499 (-)NCBICHM1_1
T2T-CHM13v2.01155,904,078 - 55,908,266 (-)NCBIT2T-CHM13v2.0
Or10ag2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39287,248,394 - 87,249,365 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl287,246,979 - 87,253,555 (+)EnsemblGRCm39 Ensembl
GRCm38287,418,050 - 87,419,021 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl287,416,635 - 87,423,211 (+)EnsemblGRCm38mm10GRCm38
MGSCv37287,258,207 - 87,259,178 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36287,218,889 - 87,219,860 (+)NCBIMGSCv36mm8
Celera289,021,941 - 89,022,912 (+)NCBICelera
Cytogenetic Map2DNCBI
cM Map249.86NCBI
Or10ag2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8393,220,038 - 93,221,009 (+)NCBIGRCr8
mRatBN7.2372,763,750 - 72,764,721 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl372,762,194 - 72,765,238 (+)NCBImRatBN7.2 Ensembl
mRatBN7.2 Ensembl372,762,194 - 72,765,238 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx376,115,504 - 76,116,475 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0384,714,070 - 84,715,041 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0382,588,248 - 82,589,219 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0375,437,833 - 75,438,804 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl375,437,833 - 75,438,804 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0382,156,575 - 82,157,546 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4371,056,189 - 71,057,160 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1370,952,560 - 70,953,532 (+)NCBI
Celera372,065,614 - 72,066,585 (+)NCBICelera
Cytogenetic Map3q24NCBI
OR10AG1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11839,894,988 - 39,895,938 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1839,895,033 - 39,895,938 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1839,419,559 - 39,420,509 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01840,584,435 - 40,585,385 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1840,584,480 - 40,585,385 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11840,194,753 - 40,195,703 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01839,757,125 - 39,758,075 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01840,343,314 - 40,344,264 (+)NCBIUU_Cfam_GSD_1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021081441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Protein Sequences
Protein RefSeqs XP_020937100 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000006207
  ENSSSCP00000006207.4
  ENSSSCP00035036741.1
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000050350 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00035065340 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000006371 ENTREZGENE
  ENSSSCT00000006371.4 UniProtKB/TrEMBL
  ENSSSCT00035087987.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
NCBI Gene LOC110258257 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 10AG1 UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A8D1D1D2 ENTREZGENE, UniProtKB/TrEMBL
  F1RWS1 ENTREZGENE, UniProtKB/TrEMBL