C1QTNF4 (C1q and TNF related 4) - Rat Genome Database

Name: C1QTNF4
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: C1QTNF4 (C1q and TNF related 4) Sus scrofa

Analyze

Symbol:

C1QTNF4

Name:

C1q and TNF related 4

RGD ID:

13882427

Description:

INVOLVED IN positive regulation of interleukin-6 production (inferred); positive regulation of interleukin-6-mediated signaling pathway (inferred); positive regulation of non-canonical NF-kappaB signal transduction (inferred); ASSOCIATED WITH congenital disorder of glycosylation type IIc (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN extracellular space (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

C1q and tumor necrosis factor related protein 4; complement C1q tumor necrosis factor-related protein 4

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	15,021,969 - 15,027,536 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	15,019,751 - 15,026,905 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	16,197,211 - 16,203,456 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

congenital disorder of glycosylation type IIc (ISO)

genetic disease (ISO)

intellectual disability (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

positive regulation of interleukin-6 production (IEA)

positive regulation of interleukin-6-mediated signaling pathway (IEA)

positive regulation of non-canonical NF-kappaB signal transduction (IEA)

positive regulation of tumor necrosis factor production (IEA)

Cellular Component

extracellular space (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

C1QTNF4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	15,021,969 - 15,027,536 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	15,019,751 - 15,026,905 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	16,197,211 - 16,203,456 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

C1QTNF4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	47,589,667 - 47,595,304 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	47,589,667 - 47,594,411 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	47,611,219 - 47,615,963 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	47,567,792 - 47,572,537 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	47,567,791 - 47,572,479	NCBI
Celera	11	47,753,979 - 47,758,717 (-)	NCBI		Celera
Cytogenetic Map	11	p11.2	NCBI
HuRef	11	47,312,306 - 47,317,061 (-)	NCBI		HuRef
CHM1_1	11	47,610,457 - 47,615,202 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	47,750,063 - 47,756,732 (-)	NCBI		T2T-CHM13v2.0

C1qtnf4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	90,713,132 - 90,720,870 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	90,716,204 - 90,720,869 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	90,882,788 - 90,890,526 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	90,885,860 - 90,890,525 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	90,725,943 - 90,730,683 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	90,686,697 - 90,691,358 (+)	NCBI		MGSCv36	mm8
Celera	2	92,270,821 - 92,275,561 (+)	NCBI		Celera
Cytogenetic Map	2	E1	NCBI
cM Map	2	50.43	NCBI

C1qtnf4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	97,310,220 - 97,328,818 (+)	NCBI		GRCr8
mRatBN7.2	3	76,854,368 - 76,872,991 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	76,857,735 - 76,874,139 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	80,346,243 - 80,350,680 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	88,944,724 - 88,949,161 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	86,796,122 - 86,800,558 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	79,713,580 - 79,718,018 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	79,713,567 - 79,718,025 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	86,422,700 - 86,427,138 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	75,248,277 - 75,252,715 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	75,144,709 - 75,149,087 (+)	NCBI
Celera	3	76,077,560 - 76,081,999 (+)	NCBI		Celera
Cytogenetic Map	3	q24	NCBI

C1qtnf4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	708,161 - 709,167 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955422	705,165 - 709,261 (+)	NCBI	ChiLan1.0	ChiLan1.0

C1QTNF4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	49,793,994 - 49,799,724 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	49,813,739 - 49,819,474 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	47,539,243 - 47,544,971 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	48,088,983 - 48,090,128 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

C1QTNF4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	42,060,880 - 42,065,411 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	40,792,685 - 40,796,767 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	42,717,222 - 42,721,306 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	18	42,204,460 - 42,208,542 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	41,758,785 - 41,762,857 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	42,488,818 - 42,492,902 (+)	NCBI		UU_Cfam_GSD_1.0

C1qtnf4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	19,526,472 - 19,551,511 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936562	1,659,164 - 1,664,183 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936562	1,659,171 - 1,663,154 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

C1QTNF4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	17,723,720 - 17,730,187 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666038	115,016,268 - 115,022,663 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

C1qtnf4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624767	1,231,098 - 1,235,341 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624767	1,230,522 - 1,235,341 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in C1QTNF4
150 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	nervous system	renal system
High
Medium
Low			16
Below cutoff	2	1	2	1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003122804	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003122805	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013994331	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021083074	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU856103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01055692	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000014451 ⟹ ENSSSCP00000014059

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	15,021,969 - 15,027,536 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000096958 ⟹ ENSSSCP00000079964

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	15,022,060 - 15,026,899 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000098102 ⟹ ENSSSCP00000075450

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	15,022,090 - 15,026,887 (+)	Ensembl

RefSeq Acc Id:

XM_003122804 ⟹ XP_003122852

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	15,019,751 - 15,026,905 (+)	NCBI

Sequence:

show sequence

AAAGAAAAAGAAAAAGAATGTAACTTGCTATGAAAATTACTATTATTTTTGGCCAAGGCATGCA
GAAGTTCCTGGGTCAGGGATTGAACCTGCGTCACAGCAGTGACCCAGGCCTCAAGGGAATTCCT
GAAAATTATTATGTTGTGGTAGTTGCACAACAAAGTAGGAGCAGATAAGGGATTACAACCCAGC
CTAGGGCTCTTTTCTTTGAACTCTGCTCATTCCTAACTTTCATTCCGGTGCATGCCCAGCCCTA
CCGGAGTCTCCCTAGACACTCACCAGTACCTGGCATCTTTTTTCTCTATCCCTTTTCCAGCAGC
CTCCACCTTGTCCCATCCCTTGAAGCAAACCCTGCTGTCCTCTGCCTCAGCCATGTGTCCCCAT
CCCCCACCCTGTCTTCTCTGGTGAAACTTTTTTTGTGAATGCAAGGAAAGTGTCCAGTGGCTTT
CAGCCTGAGACAGACCCCCACTGGGATTTAATTGTCCTGCTTAGAGAGTCCTGCCTTTTCCCCT
TCCTTTCCATTAATGGAATCGCACCTTCGAAAGACACCTTCAAGATGGCAGCCCCACCCTCCTG
GCCCAGAAGAGGTACTTATGCCCTACAAAGAGTTTGGCTGCCACAGGACCACTTCCTGCCTTCC
CCAGCCCTCCTGCCACATCCTGGGTGGCTGGGCCCACCCTCACCCTGTCTCGCCACCCCCCACA
CCCCACCTAGGCCTTTTCAGAGTGGTGAAGGAGACAGAGGTACTCCCAGTCTACAGGTGCTTCA
CCCTGAGTCCCCAGGTACCCCCGTGCCTGGCCCAAAATGCCTCCACTCATTCCTTTTTTTTTTT
TTTTTTTTTCCCTTTCCTTTTTTTGGCTGCCCCATGGCATATAGAGCTCCCAGGCCAGGGGCCA
GATCCTAGCTGCAGTTGTGACCTACCCCGCAGCTGCAGCAATGCCAGATCCTTTAACCCACTGT
GCCAGGTCAGGGATCGAACCATCGTCCTGGCGCTACAGAGATGCCGCCGATCCTGTTGTGCCAC
AGCAGGAACTCCCATTCCTTTCCAGTAAGGCACATATCAGTTCATTTCAAAATTCCTAACACCG
TGGAGAACACTTAATGAGTTCATCATCACTGTCAGCACCTTCATGAGGACTAACCCATGTTAGA
TTAACTGGGGTCATGTAAATTCTGAGGGTTCCAGAAGGAAAGCTCTAGAGGGCAGGGGGTTTCA
TGGGGCACCAGGCTTCTCATGGAGCACACAGAGGGTCCGTGGCAGAGCCAGGACTGGAGCCCAG
GCCTCTGGAGTCAATCAGGGGCAGACAGAGGGCACCCCCGCCACTGCCCTGCTCCTGGCAGCTG
ACAGTGGGGCTCTTCAAAAGCCATTCTTCTACTGAGTGCCAGGCAGGTTGCCCCTGCACAGCTC
TCAGGAGAGGACAGCAGCCTTCCCAAGGTGGGCTCAGAGCCCAGAGTGGAAGCCACGGAAGCGC
TGGGGCAAGAAGACAGCTGTTCCCAGCCCTGGTGTCCTGCTGGGTCCTGTCACCCTGGCCCACA
CAGGCAGAGCGTCAATGCCCCTGCCCTCCTTGCAGGTGCTGTGGACGAAGCCTTTCTGCCCAAA
TTCTATTCTGTCCCAAGGACTCTCCTCCTTCCTCACCCACTCTCCAGGGAGCCCAGGCTGACCC
TCTGAAGTCTGGGGGCTTTGTCTTCCTTCTTCTTTCCTTACAAACCATGGGCATTTTCGGATTT
AGAGGTGAGGAAGGAAATCAGGTCACTGTAAGCTCTTCCTTTACTGGCACCATTGATCCATTTA
TCCTTCTCTTCCCTCAGCCCCCTCCCCCAGTGCCACTCTGGACATCTGTCCCAGCCAAACTCTC
ACCTTCCACTGTCCTTGCAGCCAGAAGCTAGTCCAGTCTCTGCGCCCTGCTCCAGTCCCCTCTC
CTAAAACCGGGGAGGAGGCTGGTCTGCACGGTGCCCAGAGCCACCCCCAGTTTGGCCTCTGCCT
CAGTTTCCCCTTCTCGGGCCTCAGTTTCCCATCTGCTCATTTGGATTAAGGATGCGTGCTCTCC
ACACCCAGAGGATGAAGCGCTAGGGAGGTCGGAGGAGGAGGAAGGGCCCCCTCTGTGCAGTATT
TTCGACCCCGCGGCTCGGCTCCGGGTCCTCGGCACGCCCCTCCCTCTCTCCTCCCCGCCCGCCT
CTCCCCCGCCCCTCCTCGCGCGGGTCCCGCGGCTCGCTCTTCAGAGGGCCCCTTTCCCCCGCCG
CCCCGCGCCCACCCCGGGGTCCCAGCGCCCCGCCCGCCGCCGCCGCCGCCGCCGCCGCCCCCGC
CAGGCCCGGCCCCGCCGCAGCGCGGGCGGTCAGTGCGCAGCCCGGCGCCCGCAGCCCGGAGCCA
GACCGAGGGCTCGGAGCGAACCCGACCGACCGCCGCCCCGCCAGGATTAATTAAGGCTTCTTCC
ATCAAAAGGGGACTTATCTTCTTGAGAGCCTGAGGGGTTTTCAAGGCGCCATGCTGCCGCTCCT
GCTGGGCCTGCTGGGCCCGGCCGCCTGCTGGGCCCTGGGCTCCACAGAGCTGCGCTCAGCCTTC
TCGGCGGCACGCACCACCCCCCTGGAGGGCACGTCGGAGATGGCAGTGACCTTCGACAAGGTGT
ACGTGAACATCGGTGGAGACTTCGACGCGGCCACCGGCCAGTTCCGCTGCCGCGTGCCCGGGGC
CTACTTCTTCTCCTTCACAGCCGGCAAGGCCCCGCACAAGAGCCTGTCGGTGATGCTGGTGCGC
AACCGCGACGAGGTGCAGGCGCTGGCCTTTGATGAGCAGCGGCGGCCCGGCACGCGGCGTGCCG
CCAGCCAGAGCGCCATGCTGCAGCTCGACTACGGCGACACGGTGTGGCTGCGGCTGCACGGCGC
CCCGCAGTACGCGCTTGGTTCGCCTGGCGCCACTTTCAGCGGCTACCTGGTGTACGCAGACGCC
GACGCGCCGGTGGGCGGGCCACCTGCAGCCCCGGAGCCGCGCTCGGCCTTCTCGGCGGCACGCA
CGCGCAGCCTGGTGGGCTCGGACGCGGCTCCCGGGCCACGGCACCAGCCGCTCGCCTTCGACAC
GGAGCTGGTCAACATTGGCGGCGACTTCGACGCGGCGGCCGGCGTGTTCCGCTGCCGCCTGCCC
GGCGCCTACTTCTTCTCCTTCACACTGGGCAAGCTGCCGCGCAAGACGCTGTCGGTGAAACTGA
TGAAGAACCGAGACGAGGTGCAGGCCATGATTTACGACGACGGCGCGTCGAGGCGCCGCGAGAT
GCAGAGCCAGAGTGTGATGCTGGCGCTGCGGCGCGGCGACGCCGTGTGGCTGCTCAGCCACGAC
CACGACGGCTACGGCGCCTACAGCAACCACGGCAAGTACATCACCTTCTCCGGCTTCCTGGTGT
ACCCCGACCTCACCCCCACCGGCCCACCCGGCTTCGGCCCTCCGGAGCTCTGAGCCTCGACCCA
GGGAGGAGCCCAGGGCGCTGCGGGGGCGTGCATGCTGAGCCGGGACCGCGGCCCGAACACCCCG
CCGGCGCAAGCCTGACGGCCCGCCCAGCGTGGCTGGACTCTGCCAATAAAGTGGGCCTGCATCT
ATCTGCCACGTCCCCC

hide sequence

RefSeq Acc Id:

XM_003122805 ⟹ XP_003122853

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	15,019,751 - 15,026,905 (+)	NCBI

Sequence:

show sequence

AAAGAAAAAGAAAAAGAATGTAACTTGCTATGAAAATTACTATTATTTTTGGCCAAGGCATGCA
GAAGTTCCTGGGTCAGGGATTGAACCTGCGTCACAGCAGTGACCCAGGCCTCAAGGGAATTCCT
GAAAATTATTATGTTGTGGTAGTTGCACAACAAAGTAGGAGCAGATAAGGGATTACAACCCAGC
CTAGGGCTCTTTTCTTTGAACTCTGCTCATTCCTAACTTTCATTCCGGTGCATGCCCAGCCCTA
CCGGAGTCTCCCTAGACACTCACCAGTACCTGGCATCTTTTTTCTCTATCCCTTTTCCAGCAGC
CTCCACCTTGTCCCATCCCTTGAAGCAAACCCTGCTGTCCTCTGCCTCAGCCATGTGTCCCCAT
CCCCCACCCTGTCTTCTCTGGTGAAACTTTTTTTGTGAATGCAAGGAAAGTGTCCAGTGGCTTT
CAGCCTGAGACAGACCCCCACTGGGATTTAATTGTCCTGCTTAGAGAGTCCTGCCTTTTCCCCT
TCCTTTCCATTAATGGAATCGCACCTTCGAAAGACACCTTCAAGATGGCAGCCCCACCCTCCTG
GCCCAGAAGAGGTACTTATGCCCTACAAAGAGTTTGGCTGCCACAGGACCACTTCCTGCCTTCC
CCAGCCCTCCTGCCACATCCTGGGTGGCTGGGCCCACCCTCACCCTGTCTCGCCACCCCCCACA
CCCCACCTAGGCCTTTTCAGAGTGGTGAAGGAGACAGAGGTACTCCCAGTCTACAGGTGCTTCA
CCCTGAGTCCCCAGGTACCCCCGTGCCTGGCCCAAAATGCCTCCACTCATTCCTTTTTTTTTTT
TTTTTTTTTCCCTTTCCTTTTTTTGGCTGCCCCATGGCATATAGAGCTCCCAGGCCAGGGGCCA
GATCCTAGCTGCAGTTGTGACCTACCCCGCAGCTGCAGCAATGCCAGATCCTTTAACCCACTGT
GCCAGGTCAGGGATCGAACCATCGTCCTGGCGCTACAGAGATGCCGCCGATCCTGTTGTGCCAC
AGCAGGAACTCCCATTCCTTTCCAGTAAGGCACATATCAGTTCATTTCAAAATTCCTAACACCG
TGGAGAACACTTAATGAGTTCATCATCACTGTCAGCACCTTCATGAGGACTAACCCATGTTAGA
TTAACTGGGGTCATGTAAATTCTGAGGGTTCCAGAAGGAAAGCTCTAGAGGGCAGGGGGTTTCA
TGGGGCACCAGGCTTCTCATGGAGCACACAGAGGGTCCGTGGCAGAGCCAGGACTGGAGCCCAG
GCCTCTGGAGTCAATCAGGGGCAGACAGAGGGCACCCCCGCCACTGCCCTGCTCCTGGCAGCTG
ACAGTGGGGCTCTTCAAAAGCCATTCTTCTACTGAGTGCCAGGCAGGTTGCCCCTGCACAGCTC
TCAGGAGAGGACAGCAGCCTTCCCAAGGTGGGCTCAGAGCCCAGAGTGGAAGCCACGGAAGCGC
TGGGGCAAGAAGACAGCTGTTCCCAGCCCTGGTGTCCTGCTGGGTCCTGTCACCCTGGCCCACA
CAGGCAGAGCGTCAATGCCCCTGCCCTCCTTGCAGGTGCTGTGGACGAAGCCTTTCTGCCCAAA
TTCTATTCTGTCCCAAGGACTCTCCTCCTTCCTCACCCACTCTCCAGGGAGCCCAGGCTGACCC
TCTGAAGTCTGGGGGCTTTGTCTTCCTTCTTCTTTCCTTACAAACCATGGGCATTTTCGGATTT
AGAGGTGAGGAAGGAAATCAGGTCACTGTAAGCTCTTCCTTTACTGGCACCATTGATCCATTTA
TCCTTCTCTTCCCTCAGCCCCCTCCCCCAGTGCCACTCTGGACATCTGTCCCAGCCAAACTCTC
ACCTTCCACTGTCCTTGCAGCCAGAAGCTAGTCCAGTCTCTGCGCCCTGCTCCAGTCCCCTCTC
CTAAAACCGGGGAGGAGGCTGGTCTGCACGGTGCCCAGAGCCACCCCCAGTTTGGCCTCTGCCT
CAGTTTCCCCTTCTCGGGCCTCAGTTTCCCATCTGCTCATTTGGATTAAGGATGCGTGCTCTCC
ACACCCAGAGGATGAAGCGCTAGGGAGGTCGGAGGAGGAGGAAGGGCCCCCTCTGTGCAGTATT
TTCGACCCCGCGGCTCGGCTCCGGGTCCTCGGCACGCCCCTCCCTCTCTCCTCCCCGCCCGCCT
CTCCCCCGCCCCTCCTCGCGCGGGTCCCGCGGCTCGCTCTTCAGAGGGCCCCTTTCCCCCGCCG
CCCCGCGCCCACCCCGGGGTCCCAGCGCCCCGCCCGCCGCCGCCGCCGCCGCCGCCGCCCCCGC
CAGGCCCGGCCCCGCCGCAGCGCGGGCGGTCAGTGCGCAGCCCGGCGCCCGCAGCCCGGAGCCA
GACCGAGGGCTCGGAGCGAACCCGACCGACCGCCGCCCCGCCAGGCGCCATGCTGCCGCTCCTG
CTGGGCCTGCTGGGCCCGGCCGCCTGCTGGGCCCTGGGCTCCACAGAGCTGCGCTCAGCCTTCT
CGGCGGCACGCACCACCCCCCTGGAGGGCACGTCGGAGATGGCAGTGACCTTCGACAAGGTGTA
CGTGAACATCGGTGGAGACTTCGACGCGGCCACCGGCCAGTTCCGCTGCCGCGTGCCCGGGGCC
TACTTCTTCTCCTTCACAGCCGGCAAGGCCCCGCACAAGAGCCTGTCGGTGATGCTGGTGCGCA
ACCGCGACGAGGTGCAGGCGCTGGCCTTTGATGAGCAGCGGCGGCCCGGCACGCGGCGTGCCGC
CAGCCAGAGCGCCATGCTGCAGCTCGACTACGGCGACACGGTGTGGCTGCGGCTGCACGGCGCC
CCGCAGTACGCGCTTGGTTCGCCTGGCGCCACTTTCAGCGGCTACCTGGTGTACGCAGACGCCG
ACGCGCCGGTGGGCGGGCCACCTGCAGCCCCGGAGCCGCGCTCGGCCTTCTCGGCGGCACGCAC
GCGCAGCCTGGTGGGCTCGGACGCGGCTCCCGGGCCACGGCACCAGCCGCTCGCCTTCGACACG
GAGCTGGTCAACATTGGCGGCGACTTCGACGCGGCGGCCGGCGTGTTCCGCTGCCGCCTGCCCG
GCGCCTACTTCTTCTCCTTCACACTGGGCAAGCTGCCGCGCAAGACGCTGTCGGTGAAACTGAT
GAAGAACCGAGACGAGGTGCAGGCCATGATTTACGACGACGGCGCGTCGAGGCGCCGCGAGATG
CAGAGCCAGAGTGTGATGCTGGCGCTGCGGCGCGGCGACGCCGTGTGGCTGCTCAGCCACGACC
ACGACGGCTACGGCGCCTACAGCAACCACGGCAAGTACATCACCTTCTCCGGCTTCCTGGTGTA
CCCCGACCTCACCCCCACCGGCCCACCCGGCTTCGGCCCTCCGGAGCTCTGAGCCTCGACCCAG
GGAGGAGCCCAGGGCGCTGCGGGGGCGTGCATGCTGAGCCGGGACCGCGGCCCGAACACCCCGC
CGGCGCAAGCCTGACGGCCCGCCCAGCGTGGCTGGACTCTGCCAATAAAGTGGGCCTGCATCTA
TCTGCCACGTCCCCC

hide sequence

RefSeq Acc Id:

XM_013994331 ⟹ XP_013849785

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	15,019,751 - 15,026,905 (+)	NCBI

Sequence:

show sequence

AAAGAAAAAGAAAAAGAATGTAACTTGCTATGAAAATTACTATTATTTTTGGCCAAGGCATGCA
GAAGTTCCTGGGTCAGGGATTGAACCTGCGTCACAGCAGTGACCCAGGCCTCAAGGGAATTCCT
GAAAATTATTATGTTGTGGTAGTTGCACAACAAAGTAGGAGCAGATAAGGGATTACAACCCAGC
CTAGGGCTCTTTTCTTTGAACTCTGCTCATTCCTAACTTTCATTCCGGTGCATGCCCAGCCCTA
CCGGAGTCTCCCTAGACACTCACCAGTACCTGGCATCTTTTTTCTCTATCCCTTTTCCAGCAGC
CTCCACCTTGTCCCATCCCTTGAAGCAAACCCTGCTGTCCTCTGCCTCAGCCATGTGTCCCCAT
CCCCCACCCTGTCTTCTCTGGTGAAACTTTTTTTGTGAATGCAAGGAAAGTGTCCAGTGGCTTT
CAGCCTGAGACAGACCCCCACTGGGATTTAATTGTCCTGCTTAGAGAGTCCTGCCTTTTCCCCT
TCCTTTCCATTAATGGAATCGCACCTTCGAAAGACACCTTCAAGATGGCAGCCCCACCCTCCTG
GCCCAGAAGAGGTACTTATGCCCTACAAAGAGTTTGGCTGCCACAGGACCACTTCCTGCCTTCC
CCAGCCCTCCTGCCACATCCTGGGTGGCTGGGCCCACCCTCACCCTGTCTCGCCACCCCCCACA
CCCCACCTAGGCCTTTTCAGAGTGGTGAAGGAGACAGAGGTACTCCCAGTCTACAGGTGCTTCA
CCCTGAGTCCCCAGGTACCCCCGTGCCTGGCCCAAAATGCCTCCACTCATTCCTTTTTTTTTTT
TTTTTTTTTCCCTTTCCTTTTTTTGGCTGCCCCATGGCATATAGAGCTCCCAGGCCAGGGGCCA
GATCCTAGCTGCAGTTGTGACCTACCCCGCAGCTGCAGCAATGCCAGATCCTTTAACCCACTGT
GCCAGGTCAGGGATCGAACCATCGTCCTGGCGCTACAGAGATGCCGCCGATCCTGTTGTGCCAC
AGCAGGAACTCCCATTCCTTTCCAGTAAGGCACATATCAGTTCATTTCAAAATTCCTAACACCG
TGGAGAACACTTAATGAGTTCATCATCACTGTCAGCACCTTCATGAGGACTAACCCATGTTAGA
TTAACTGGGGTCATGTAAATTCTGAGGGTTCCAGAAGGAAAGCTCTAGAGGGCAGGGGGTTTCA
TGGGGCACCAGGCTTCTCATGGAGCACACAGAGGGTCCGTGGCAGAGCCAGGACTGGAGCCCAG
GCCTCTGGAGTCAATCAGGGGCAGACAGAGGGCACCCCCGCCACTGCCCTGCTCCTGGCAGCTG
ACAGTGGGGCTCTTCAAAAGCCATTCTTCTACTGAGTGCCAGGCAGGTTGCCCCTGCACAGCTC
TCAGGAGAGGACAGCAGCCTTCCCAAGGTGGGCTCAGAGCCCAGAGTGGAAGCCACGGAAGCGC
TGGGGCAAGAAGACAGCTGTTCCCAGCCCTGGTGTCCTGCTGGGTCCTGTCACCCTGGCCCACA
CAGGCAGAGCGTCAATGCCCCTGCCCTCCTTGCAGGTGCTGTGGACGAAGCCTTTCTGCCCAAA
TTCTATTCTGTCCCAAGGACTCTCCTCCTTCCTCACCCACTCTCCAGGGAGCCCAGGCTGACCC
TCTGAAGTCTGGGGGCTTTGTCTTCCTTCTTCTTTCCTTACAAACCATGGGCATTTTCGGATTT
AGAGGTGAGGAAGGAAATCAGGTCACTGTAAGCTCTTCCTTTACTGGCACCATTGATCCATTTA
TCCTTCTCTTCCCTCAGCCCCCTCCCCCAGTGCCACTCTGGACATCTGTCCCAGCCAAACTCTC
ACCTTCCACTGTCCTTGCAGCCAGAAGCTAGTCCAGTCTCTGCGCCCTGCTCCAGTCCCCTCTC
CTAAAACCGGGGAGGAGGCTGGTCTGCACGGTGCCCAGAGCCACCCCCAGTTTGGCCTCTGCCT
CAGTTTCCCCTTCTCGGGCCTCAGTTTCCCATCTGCTCATTTGGATTAAGGATGCGTGCTCTCC
ACACCCAGAGGATGAAGCGCTAGGGAGGTCGGAGGAGGAGGAAGGGCCCCCTCTGTGCAGTATT
TTCGACCCCGCGGCTCGGCTCCGGGTCCTCGGCACGCCCCTCCCTCTCTCCTCCCCGCCCGCCT
CTCCCCCGCCCCTCCTCGCGCGGGTCCCGCGGCTCGCTCTTCAGAGGGCCCCTTTCCCCCGCCG
CCCCGCGCCCACCCCGGGGTCCCAGCGCCCCGCCCGCCGCCGCCGCCGCCGCCGCCGCCCCCGC
CAGGCCCGGCCCCGCCGCAGCGCGGGCGGTCAGTGCGCAGCCCGGCGCCCGCAGCCCGGAGCCA
GACCGAGGGCTCGGAGCGAACCCGACCGACCGCCGCCCCGCCAGGGGACTTATCTTCTTGAGAG
CCTGAGGGGTTTTCAAGGCGCCATGCTGCCGCTCCTGCTGGGCCTGCTGGGCCCGGCCGCCTGC
TGGGCCCTGGGCTCCACAGAGCTGCGCTCAGCCTTCTCGGCGGCACGCACCACCCCCCTGGAGG
GCACGTCGGAGATGGCAGTGACCTTCGACAAGGTGTACGTGAACATCGGTGGAGACTTCGACGC
GGCCACCGGCCAGTTCCGCTGCCGCGTGCCCGGGGCCTACTTCTTCTCCTTCACAGCCGGCAAG
GCCCCGCACAAGAGCCTGTCGGTGATGCTGGTGCGCAACCGCGACGAGGTGCAGGCGCTGGCCT
TTGATGAGCAGCGGCGGCCCGGCACGCGGCGTGCCGCCAGCCAGAGCGCCATGCTGCAGCTCGA
CTACGGCGACACGGTGTGGCTGCGGCTGCACGGCGCCCCGCAGTACGCGCTTGGTTCGCCTGGC
GCCACTTTCAGCGGCTACCTGGTGTACGCAGACGCCGACGCGCCGGTGGGCGGGCCACCTGCAG
CCCCGGAGCCGCGCTCGGCCTTCTCGGCGGCACGCACGCGCAGCCTGGTGGGCTCGGACGCGGC
TCCCGGGCCACGGCACCAGCCGCTCGCCTTCGACACGGAGCTGGTCAACATTGGCGGCGACTTC
GACGCGGCGGCCGGCGTGTTCCGCTGCCGCCTGCCCGGCGCCTACTTCTTCTCCTTCACACTGG
GCAAGCTGCCGCGCAAGACGCTGTCGGTGAAACTGATGAAGAACCGAGACGAGGTGCAGGCCAT
GATTTACGACGACGGCGCGTCGAGGCGCCGCGAGATGCAGAGCCAGAGTGTGATGCTGGCGCTG
CGGCGCGGCGACGCCGTGTGGCTGCTCAGCCACGACCACGACGGCTACGGCGCCTACAGCAACC
ACGGCAAGTACATCACCTTCTCCGGCTTCCTGGTGTACCCCGACCTCACCCCCACCGGCCCACC
CGGCTTCGGCCCTCCGGAGCTCTGAGCCTCGACCCAGGGAGGAGCCCAGGGCGCTGCGGGGGCG
TGCATGCTGAGCCGGGACCGCGGCCCGAACACCCCGCCGGCGCAAGCCTGACGGCCCGCCCAGC
GTGGCTGGACTCTGCCAATAAAGTGGGCCTGCATCTATCTGCCACGTCCCCC

hide sequence

RefSeq Acc Id:

XM_021083074 ⟹ XP_020938733

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	15,024,166 - 15,026,905 (+)	NCBI

Sequence:

show sequence

TCAGTCCACGGCCCAAGAACTTCCATATGCTGCAAGTGTAGCCATTAAAAAAAAAAAAAAAAAA
AAGAACTTGATCAGATTGCTTTTCTCAAGGTTAAGATACTGTCATCCAACAAACATGTTCACAC
CTCCTCCATTTACACAGAGGGAGCCGTGCCCAGAGAAGTTAAGGAAATTGCCTAAGGTGTCACA
GCATGTAAGGGGTAGAGACAGGACCTGAGCCCAGATTTAGCTGAGTCCTCTCCACTCCACCACT
ACTGAGAACCAAGATGCTGCCCTCAGACTTGCCAAAGCCCCGCTGGAATTGTAGCCTCCCTCTC
TATCTCCAGCAGCCTGAGGTTCTCCCCTTTCTCTCAATGACCAGCCCCCAAGCCCAGAGGAAGG
TGTCCCTTTCTCTTACTCTGATTTCATGGGGGGAGGGGAGAGGAGCTACCTCAAAGCCTGTCTG
TTCTGGCTTCTAGTGCAAGAAGGGCCCCTGGTGAGTCCAGAGGTCCAGTGTGGGAGCTGACCTT
TGACTGGGTCAGAGGCCAGGAAAGGGGCGAGGGAGCAGTTATTTCCTTTTCTGCCCACATGGGG
GCTTAAACAGTAGCCATCCAATATATCCAGGATATCAGTATAGAGAGGCAGTGCCTGAGTGAAG
GGCAGGCCAAGGACTGTAGAATAGACAGAGGAAAATGCAGCAAATCAGAGGCTGAAGGAAACTT
GAGACCCCCGACTACCCTCTGTGTTCCCAGGACCCCTGGGTGTCAAGGAAGAGGGAATGTGCTA
AGCCCAGCAGACAGGGCTATAGGACCCTTCAACCAGAGCATTTCTGCTGCTATCTGTATGTAAC
ATGTCTCTGTGATATATTTGTGTGACAGGGGTAACAAGAAAGAAAGAAAGGAGGGAGAATTGCT
GGCCTAATCTAATGGTTCCTGGAGTGTGGTTCCTGGACTAGCAACATCTGCAGTACCTGGGAAC
TTGTTAGAAATGCATATTCTGAGCCTTCATTCTAGCTGAGGTGGGGGTGGGGACCAACAACCAC
GTTTGTTGGTTTTTGTTTTTCTTTTTGGCCACCGCCTAGGCATATGGAGTCCCAAGCCAGGGAT
CAGATCTGAGGGGCAGTTGCAACCTACGAAGCAAGGGCGGGTCCTTTAACCCACCCTGCAGGGA
TCTAACCCAGTCCTTGGCACTGCAGAGCCGCCTTAGCAGATCCCGCTGTGACACACCAGGAAAT
ATTTATTTATTTATTTATTTTAACGGCTGCACCTGCGGCATTTGGAAGTTCCCAGGCCAGGGCT
CCAATACAGCCACAGCTGCAACTTACCCAGCTGCAGCCAAGCCAGATCCTTTAACACACTGCGT
CTAGCAGGGGGCCTAGCTGTGGACTGGACCCGCTTGCTCTGCAGCTGCCTGAGCGGCTCCAGTT
GGATTCTTAACCCCGTGTGCCACAGTGGGAACTCCAACAATGTGTGGCCGTCCAGGCGCCATGC
TGCCGCTCCTGCTGGGCCTGCTGGGCCCGGCCGCCTGCTGGGCCCTGGGCTCCACAGAGCTGCG
CTCAGCCTTCTCGGCGGCACGCACCACCCCCCTGGAGGGCACGTCGGAGATGGCAGTGACCTTC
GACAAGGTGTACGTGAACATCGGTGGAGACTTCGACGCGGCCACCGGCCAGTTCCGCTGCCGCG
TGCCCGGGGCCTACTTCTTCTCCTTCACAGCCGGCAAGGCCCCGCACAAGAGCCTGTCGGTGAT
GCTGGTGCGCAACCGCGACGAGGTGCAGGCGCTGGCCTTTGATGAGCAGCGGCGGCCCGGCACG
CGGCGTGCCGCCAGCCAGAGCGCCATGCTGCAGCTCGACTACGGCGACACGGTGTGGCTGCGGC
TGCACGGCGCCCCGCAGTACGCGCTTGGTTCGCCTGGCGCCACTTTCAGCGGCTACCTGGTGTA
CGCAGACGCCGACGCGCCGGTGGGCGGGCCACCTGCAGCCCCGGAGCCGCGCTCGGCCTTCTCG
GCGGCACGCACGCGCAGCCTGGTGGGCTCGGACGCGGCTCCCGGGCCACGGCACCAGCCGCTCG
CCTTCGACACGGAGCTGGTCAACATTGGCGGCGACTTCGACGCGGCGGCCGGCGTGTTCCGCTG
CCGCCTGCCCGGCGCCTACTTCTTCTCCTTCACACTGGGCAAGCTGCCGCGCAAGACGCTGTCG
GTGAAACTGATGAAGAACCGAGACGAGGTGCAGGCCATGATTTACGACGACGGCGCGTCGAGGC
GCCGCGAGATGCAGAGCCAGAGTGTGATGCTGGCGCTGCGGCGCGGCGACGCCGTGTGGCTGCT
CAGCCACGACCACGACGGCTACGGCGCCTACAGCAACCACGGCAAGTACATCACCTTCTCCGGC
TTCCTGGTGTACCCCGACCTCACCCCCACCGGCCCACCCGGCTTCGGCCCTCCGGAGCTCTGAG
CCTCGACCCAGGGAGGAGCCCAGGGCGCTGCGGGGGCGTGCATGCTGAGCCGGGACCGCGGCCC
GAACACCCCGCCGGCGCAAGCCTGACGGCCCGCCCAGCGTGGCTGGACTCTGCCAATAAAGTGG
GCCTGCATCTATCTGCCACGTCCCCC

hide sequence

Protein Sequences


Protein RefSeqs	XP_003122852	(Get FASTA)	NCBI Sequence Viewer
	XP_003122853	(Get FASTA)	NCBI Sequence Viewer
	XP_013849785	(Get FASTA)	NCBI Sequence Viewer
	XP_020938733	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000014059.4
	ENSSSCP00000075450
	ENSSSCP00000075450.1
	ENSSSCP00000079964
	ENSSSCP00000079964.1
	ENSSSCP00015037936.1
	ENSSSCP00015037965.1
	ENSSSCP00030012946.1
	ENSSSCP00030012949.1
	ENSSSCP00035013463.1
	ENSSSCP00035013465.1
	ENSSSCP00040040609.1
	ENSSSCP00040040632.1
	ENSSSCP00050004154.1
	ENSSSCP00050004159.1

RefSeq Acc Id:	XP_003122852 ⟸ XM_003122804
- Peptide Label:	isoform X2
- UniProtKB:	A0A8W4F866 (UniProtKB/TrEMBL), A0A8D0PWG9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLPLLLGLLGPAACWALGSTELRSAFSAARTTPLEGTSEMAVTFDKVYVNIGGDFDAATGQFRC RVPGAYFFSFTAGKAPHKSLSVMLVRNRDEVQALAFDEQRRPGTRRAASQSAMLQLDYGDTVWL RLHGAPQYALGSPGATFSGYLVYADADAPVGGPPAAPEPRSAFSAARTRSLVGSDAAPGPRHQP LAFDTELVNIGGDFDAAAGVFRCRLPGAYFFSFTLGKLPRKTLSVKLMKNRDEVQAMIYDDGAS RRREMQSQSVMLALRRGDAVWLLSHDHDGYGAYSNHGKYITFSGFLVYPDLTPTGPPGFGPPEL hide sequence

RefSeq Acc Id:	XP_013849785 ⟸ XM_013994331
- Peptide Label:	isoform X2
- UniProtKB:	A0A8W4F866 (UniProtKB/TrEMBL), A0A8D0PWG9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLPLLLGLLGPAACWALGSTELRSAFSAARTTPLEGTSEMAVTFDKVYVNIGGDFDAATGQFRC RVPGAYFFSFTAGKAPHKSLSVMLVRNRDEVQALAFDEQRRPGTRRAASQSAMLQLDYGDTVWL RLHGAPQYALGSPGATFSGYLVYADADAPVGGPPAAPEPRSAFSAARTRSLVGSDAAPGPRHQP LAFDTELVNIGGDFDAAAGVFRCRLPGAYFFSFTLGKLPRKTLSVKLMKNRDEVQAMIYDDGAS RRREMQSQSVMLALRRGDAVWLLSHDHDGYGAYSNHGKYITFSGFLVYPDLTPTGPPGFGPPEL hide sequence

RefSeq Acc Id:	XP_003122853 ⟸ XM_003122805
- Peptide Label:	isoform X2
- UniProtKB:	A0A8W4F866 (UniProtKB/TrEMBL), A0A8D0PWG9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLPLLLGLLGPAACWALGSTELRSAFSAARTTPLEGTSEMAVTFDKVYVNIGGDFDAATGQFRC RVPGAYFFSFTAGKAPHKSLSVMLVRNRDEVQALAFDEQRRPGTRRAASQSAMLQLDYGDTVWL RLHGAPQYALGSPGATFSGYLVYADADAPVGGPPAAPEPRSAFSAARTRSLVGSDAAPGPRHQP LAFDTELVNIGGDFDAAAGVFRCRLPGAYFFSFTLGKLPRKTLSVKLMKNRDEVQAMIYDDGAS RRREMQSQSVMLALRRGDAVWLLSHDHDGYGAYSNHGKYITFSGFLVYPDLTPTGPPGFGPPEL hide sequence

RefSeq Acc Id:	XP_020938733 ⟸ XM_021083074
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D0PWG9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MCGRPGAMLPLLLGLLGPAACWALGSTELRSAFSAARTTPLEGTSEMAVTFDKVYVNIGGDFDA ATGQFRCRVPGAYFFSFTAGKAPHKSLSVMLVRNRDEVQALAFDEQRRPGTRRAASQSAMLQLD YGDTVWLRLHGAPQYALGSPGATFSGYLVYADADAPVGGPPAAPEPRSAFSAARTRSLVGSDAA PGPRHQPLAFDTELVNIGGDFDAAAGVFRCRLPGAYFFSFTLGKLPRKTLSVKLMKNRDEVQAM IYDDGASRRREMQSQSVMLALRRGDAVWLLSHDHDGYGAYSNHGKYITFSGFLVYPDLTPTGPP GFGPPEL hide sequence

RefSeq Acc Id:

ENSSSCP00000075450 ⟸ ENSSSCT00000098102

RefSeq Acc Id:

ENSSSCP00000079964 ⟸ ENSSSCT00000096958

RefSeq Acc Id:

ENSSSCP00000014059 ⟸ ENSSSCT00000014451

Protein Domains

C1q

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000013231	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015069305	UniProtKB/TrEMBL
	ENSSSCG00030020912	UniProtKB/TrEMBL
	ENSSSCG00035025861	UniProtKB/TrEMBL
	ENSSSCG00040067329	UniProtKB/TrEMBL
	ENSSSCG00050007082	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000014451.4	UniProtKB/TrEMBL
	ENSSSCT00000096958	ENTREZGENE
	ENSSSCT00000096958.1	UniProtKB/TrEMBL
	ENSSSCT00000098102	ENTREZGENE
	ENSSSCT00000098102.1	UniProtKB/TrEMBL
	ENSSSCT00015092773.1	UniProtKB/TrEMBL
	ENSSSCT00015092821.1	UniProtKB/TrEMBL
	ENSSSCT00030028931.1	UniProtKB/TrEMBL
	ENSSSCT00030028934.1	UniProtKB/TrEMBL
	ENSSSCT00035034076.1	UniProtKB/TrEMBL
	ENSSSCT00035034078.1	UniProtKB/TrEMBL
	ENSSSCT00040092040.1	UniProtKB/TrEMBL
	ENSSSCT00040092093.1	UniProtKB/TrEMBL
	ENSSSCT00050009662.1	UniProtKB/TrEMBL
	ENSSSCT00050009668.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.120.40	UniProtKB/TrEMBL
InterPro	C1q_dom	UniProtKB/TrEMBL
	Tumour_necrosis_fac-like_dom	UniProtKB/TrEMBL
KEGG Report	ssc:100511621	UniProtKB/TrEMBL
NCBI Gene	C1QTNF4	ENTREZGENE
PANTHER	CEREBELLIN-RELATED	UniProtKB/TrEMBL
	COMPLEMENT C1Q TUMOR NECROSIS FACTOR-RELATED PROTEIN 4	UniProtKB/TrEMBL
Pfam	C1q	UniProtKB/TrEMBL
PRINTS	COMPLEMNTC1Q	UniProtKB/TrEMBL
PROSITE	C1Q	UniProtKB/TrEMBL
SMART	C1Q	UniProtKB/TrEMBL
Superfamily-SCOP	SSF49842	UniProtKB/TrEMBL
UniProt	A0A8D0PWG9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8W4F866	ENTREZGENE, UniProtKB/TrEMBL
	F1SIF0_PIG	UniProtKB/TrEMBL
VGNC ID	VGNC:85984	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar