RENBP (renin binding protein) - Rat Genome Database

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Gene: RENBP (renin binding protein) Sus scrofa
Analyze
Symbol: RENBP
Name: renin binding protein
RGD ID: 13880462
Description: ENCODES a protein that exhibits identical protein binding; N-acylglucosamine 2-epimerase activity; peptidase inhibitor activity; INVOLVED IN N-acetylglucosamine metabolic process (ortholog); N-acetylmannosamine metabolic process (ortholog); negative regulation of catalytic activity (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH adrenoleukodystrophy (ortholog); autistic disorder (ortholog); autosomal hemophilia A (ortholog); INTERACTS WITH deoxynivalenol
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: AGE; GlcNAc 2-epimerase; N-acetyl-D-glucosamine 2-epimerase; N-acyl-D-glucosamine 2-epimerase; N-acylglucosamine 2-epimerase; RnBP
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX124,662,719 - 124,672,235 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X124,662,957 - 124,670,522 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X142,227,781 - 142,235,348 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:2050686   PMID:2182620   PMID:8663114   PMID:11061972   PMID:15679890   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
RENBP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX124,662,719 - 124,672,235 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X124,662,957 - 124,670,522 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X142,227,781 - 142,235,348 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RENBP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X153,935,269 - 153,944,643 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX153,935,269 - 153,944,687 (-)EnsemblGRCh38hg38GRCh38
GRCh37X153,200,722 - 153,210,095 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X152,853,917 - 152,863,426 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X152,721,569 - 152,731,079NCBI
CeleraX153,434,439 - 153,443,945 (-)NCBICelera
Cytogenetic MapXq28NCBI
HuRefX141,853,485 - 141,862,600 (-)NCBIHuRef
CHM1_1X153,075,217 - 153,084,644 (-)NCBICHM1_1
T2T-CHM13v2.0X152,208,986 - 152,218,361 (-)NCBIT2T-CHM13v2.0
Renbp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X72,965,727 - 72,974,408 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX72,965,727 - 72,974,456 (-)EnsemblGRCm39 Ensembl
GRCm38X73,922,121 - 73,930,850 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX73,922,121 - 73,930,850 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X71,167,460 - 71,176,189 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X70,174,842 - 70,183,538 (-)NCBIMGSCv36mm8
CeleraX65,174,555 - 65,183,285 (-)NCBICelera
Cytogenetic MapXA7.3NCBI
cM MapX37.49NCBI
Renbp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X156,812,785 - 156,821,860 (-)NCBIGRCr8
mRatBN7.2X151,661,463 - 151,670,538 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX151,661,458 - 151,670,516 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX153,802,628 - 153,811,561 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X157,365,846 - 157,374,779 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X155,037,677 - 155,046,610 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X156,854,490 - 156,863,548 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX156,854,594 - 156,863,528 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01152,602,562 - 152,611,616 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X159,849,355 - 159,858,288 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X159,924,790 - 159,933,724 (-)NCBI
Celera1136,221,770 - 136,230,703 (+)NCBICelera
Cytogenetic MapXq37NCBI
Renbp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955580609,964 - 615,027 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955580610,112 - 615,019 (-)NCBIChiLan1.0ChiLan1.0
RENBP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X153,980,083 - 153,989,479 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X153,983,688 - 153,993,072 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X143,490,103 - 143,499,487 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X153,376,853 - 153,386,214 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX153,376,847 - 153,386,214 (-)Ensemblpanpan1.1panPan2
RENBP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X121,782,411 - 121,788,928 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX121,727,573 - 121,788,860 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX107,111,170 - 107,117,703 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X124,923,691 - 124,930,226 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX124,918,987 - 124,930,159 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X120,692,968 - 120,699,499 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X123,208,364 - 123,214,895 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X122,969,701 - 122,976,234 (-)NCBIUU_Cfam_GSD_1.0
Renbp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X119,079,621 - 119,086,182 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936809817,355 - 823,941 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936809817,392 - 823,926 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RENBP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X128,359,313 - 128,369,070 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX128,359,396 - 128,368,581 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606566,229,335 - 66,239,931 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in RENBP
74 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence


Ensembl Acc Id: ENSSSCT00000013984   ⟹   ENSSSCP00000013601
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX124,662,961 - 124,670,535 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000035242   ⟹   ENSSSCP00000029971
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX124,662,719 - 124,672,204 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000035394   ⟹   ENSSSCP00000028929
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX124,662,960 - 124,670,533 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000036431   ⟹   ENSSSCP00000028910
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX124,657,675 - 124,672,235 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000075693   ⟹   ENSSSCP00000067942
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX124,665,404 - 124,670,460 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000085986   ⟹   ENSSSCP00000068597
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX124,662,961 - 124,672,235 (-)Ensembl
RefSeq Acc Id: NM_213900   ⟹   NP_999065
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X124,662,957 - 124,670,522 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_999065 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA31116 (Get FASTA)   NCBI Sequence Viewer  
  AAS55912 (Get FASTA)   NCBI Sequence Viewer  
  BAA12103 (Get FASTA)   NCBI Sequence Viewer  
  CAJ34140 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000013601
  ENSSSCP00000013601.3
  ENSSSCP00000028929.2
  ENSSSCP00000029971.3
  ENSSSCP00000067942.1
  ENSSSCP00000068597.1
  ENSSSCP00015006645.1
  ENSSSCP00025024143.1
  ENSSSCP00025024221.1
  ENSSSCP00025024306.1
  ENSSSCP00025024381.1
  ENSSSCP00025024439.1
  ENSSSCP00025024510.1
  ENSSSCP00040048126.1
  ENSSSCP00040048129.1
  ENSSSCP00040048132.1
  ENSSSCP00040048135.1
  ENSSSCP00040048139.1
  ENSSSCP00040048143.1
  ENSSSCP00045018136.1
  ENSSSCP00045018173.1
  ENSSSCP00045018219.1
  ENSSSCP00045018269.1
  ENSSSCP00045018299.1
  ENSSSCP00045018360.1
  ENSSSCP00050027190.1
  ENSSSCP00050027193.1
  ENSSSCP00050027198.1
  ENSSSCP00050027201.1
  ENSSSCP00050027203.1
  ENSSSCP00050027205.1
  ENSSSCP00055010214.1
  ENSSSCP00055010291.1
  ENSSSCP00055010345.1
  ENSSSCP00055010400.1
  ENSSSCP00055010462.1
  ENSSSCP00055010533.1
  ENSSSCP00060014089.1
  ENSSSCP00060014107.1
  ENSSSCP00060014108.1
  ENSSSCP00060014112.1
  ENSSSCP00060014119.1
  ENSSSCP00060014125.1
  ENSSSCP00065015994.1
  ENSSSCP00065015998.1
  ENSSSCP00065016001.1
  ENSSSCP00065016002.1
  ENSSSCP00065016004.1
  ENSSSCP00065016010.1
  ENSSSCP00070041682.1
  ENSSSCP00070041683.1
  ENSSSCP00070041685.1
GenBank Protein P17560 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_999065   ⟸   NM_213900
- UniProtKB: Q6QAR6 (UniProtKB/Swiss-Prot),   Q95331 (UniProtKB/Swiss-Prot),   P17560 (UniProtKB/Swiss-Prot),   A0A480X7B8 (UniProtKB/TrEMBL),   A0A481CGU4 (UniProtKB/TrEMBL),   A0A8D0MSS0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000067942   ⟸   ENSSSCT00000075693
Ensembl Acc Id: ENSSSCP00000029971   ⟸   ENSSSCT00000035242
Ensembl Acc Id: ENSSSCP00000028929   ⟸   ENSSSCT00000035394
Ensembl Acc Id: ENSSSCP00000028910   ⟸   ENSSSCT00000036431
Ensembl Acc Id: ENSSSCP00000068597   ⟸   ENSSSCT00000085986
Ensembl Acc Id: ENSSSCP00000013601   ⟸   ENSSSCT00000013984


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000012792 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015012875 UniProtKB/TrEMBL
  ENSSSCG00025042118 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSSSCG00040075762 UniProtKB/TrEMBL
  ENSSSCG00045015476 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSSSCG00050046529 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSSSCG00055006721 UniProtKB/TrEMBL
  ENSSSCG00060024209 UniProtKB/TrEMBL
  ENSSSCG00065028135 UniProtKB/TrEMBL
  ENSSSCG00070024702 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000013984 ENTREZGENE
  ENSSSCT00000013984.6 UniProtKB/TrEMBL
  ENSSSCT00000035242.4 UniProtKB/TrEMBL
  ENSSSCT00000035394.4 UniProtKB/TrEMBL
  ENSSSCT00000075693.1 UniProtKB/TrEMBL
  ENSSSCT00000085986.1 UniProtKB/TrEMBL
  ENSSSCT00015017009.1 UniProtKB/TrEMBL
  ENSSSCT00025057105.1 UniProtKB/TrEMBL
  ENSSSCT00025057278.1 UniProtKB/TrEMBL
  ENSSSCT00025057451.1 UniProtKB/TrEMBL
  ENSSSCT00025057608.1 UniProtKB/Swiss-Prot
  ENSSSCT00025057741.1 UniProtKB/TrEMBL
  ENSSSCT00025057922.1 UniProtKB/TrEMBL
  ENSSSCT00040105231.1 UniProtKB/TrEMBL
  ENSSSCT00040105239.1 UniProtKB/TrEMBL
  ENSSSCT00040105243.1 UniProtKB/TrEMBL
  ENSSSCT00040105247.1 UniProtKB/TrEMBL
  ENSSSCT00040105253.1 UniProtKB/TrEMBL
  ENSSSCT00040105257.1 UniProtKB/TrEMBL
  ENSSSCT00045026276.1 UniProtKB/TrEMBL
  ENSSSCT00045026332.1 UniProtKB/TrEMBL
  ENSSSCT00045026392.1 UniProtKB/TrEMBL
  ENSSSCT00045026461.1 UniProtKB/TrEMBL
  ENSSSCT00045026514.1 UniProtKB/Swiss-Prot
  ENSSSCT00045026598.1 UniProtKB/TrEMBL
  ENSSSCT00050063308.1 UniProtKB/TrEMBL
  ENSSSCT00050063313.1 UniProtKB/Swiss-Prot
  ENSSSCT00050063329.1 UniProtKB/TrEMBL
  ENSSSCT00050063332.1 UniProtKB/TrEMBL
  ENSSSCT00050063334.1 UniProtKB/TrEMBL
  ENSSSCT00050063338.1 UniProtKB/TrEMBL
  ENSSSCT00055012997.1 UniProtKB/TrEMBL
  ENSSSCT00055013104.1 UniProtKB/TrEMBL
  ENSSSCT00055013173.1 UniProtKB/TrEMBL
  ENSSSCT00055013236.1 UniProtKB/TrEMBL
  ENSSSCT00055013308.1 UniProtKB/TrEMBL
  ENSSSCT00055013395.1 UniProtKB/TrEMBL
  ENSSSCT00060032833.1 UniProtKB/TrEMBL
  ENSSSCT00060032876.1 UniProtKB/TrEMBL
  ENSSSCT00060032883.1 UniProtKB/TrEMBL
  ENSSSCT00060032892.1 UniProtKB/TrEMBL
  ENSSSCT00060032903.1 UniProtKB/TrEMBL
  ENSSSCT00060032914.1 UniProtKB/TrEMBL
  ENSSSCT00065037932.1 UniProtKB/TrEMBL
  ENSSSCT00065037937.1 UniProtKB/TrEMBL
  ENSSSCT00065037940.1 UniProtKB/TrEMBL
  ENSSSCT00065037941.1 UniProtKB/TrEMBL
  ENSSSCT00065037943.1 UniProtKB/TrEMBL
  ENSSSCT00065037958.1 UniProtKB/TrEMBL
  ENSSSCT00070049354.1 UniProtKB/TrEMBL
  ENSSSCT00070049355.1 UniProtKB/TrEMBL
  ENSSSCT00070049357.1 UniProtKB/TrEMBL
Gene3D-CATH 1.50.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro 6-hairpin_glycosidase_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  6hp_glycosidase-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AGE/CE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AGE_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report ssc:396934 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene RENBP ENTREZGENE
PANTHER N-ACYLGLUCOSAMINE 2-EPIMERASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  N-ACYLGLUCOSAMINE-2-EPIMERASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam GlcNAc_2-epim UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48208 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A480X7B8 ENTREZGENE, UniProtKB/TrEMBL
  A0A481CGU4 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1VEH6_PIG UniProtKB/TrEMBL
  A0A4X1VIH1_PIG UniProtKB/TrEMBL
  A0A4X1VIP9_PIG UniProtKB/TrEMBL
  A0A5G2QSY3_PIG UniProtKB/TrEMBL
  A0A5G2R324_PIG UniProtKB/TrEMBL
  A0A8D0MSS0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1GC39_PIG UniProtKB/TrEMBL
  A0A8D1UT27_PIG UniProtKB/TrEMBL
  A0A8D2BE91_PIG UniProtKB/TrEMBL
  A0A900PNS1_PIG UniProtKB/TrEMBL
  F1RZU4_PIG UniProtKB/TrEMBL
  K7GM41_PIG UniProtKB/TrEMBL
  P17560 ENTREZGENE
  Q6QAR6 ENTREZGENE
  Q95331 ENTREZGENE
  RENBP_PIG UniProtKB/Swiss-Prot
UniProt Secondary Q6QAR6 UniProtKB/Swiss-Prot
  Q95331 UniProtKB/Swiss-Prot
VGNC ID VGNC:109483 ENTREZGENE