ING5 (inhibitor of growth family member 5) - Rat Genome Database

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Gene: ING5 (inhibitor of growth family member 5) Sus scrofa
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Symbol: ING5
Name: inhibitor of growth family member 5
RGD ID: 13879038
Description: ENCODES a protein that exhibits chromatin binding (inferred); metal ion binding (inferred); methylated histone binding (inferred); INVOLVED IN apoptotic signaling pathway (ortholog); fibroblast proliferation (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH Bethlem Myopathy 1A (ortholog); chromosome 2q37 deletion syndrome (ortholog); D-2-hydroxyglutaric aciduria 1 (ortholog); FOUND IN histone acetyltransferase complex (ortholog); MOZ/MORF histone acetyltransferase complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: inhibitor of growth protein 5
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15140,264,766 - 140,279,010 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115140,264,708 - 140,279,020 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ING5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15140,264,766 - 140,279,010 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115140,264,708 - 140,279,020 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ING5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382241,687,020 - 241,729,478 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2241,687,085 - 241,729,478 (+)EnsemblGRCh38hg38GRCh38
GRCh372242,626,435 - 242,668,893 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362242,290,129 - 242,317,569 (+)NCBINCBI36Build 36hg18NCBI36
Build 342242,361,445 - 242,388,884NCBI
Celera2236,316,253 - 236,341,094 (+)NCBICelera
Cytogenetic Map2q37.3NCBI
HuRef2234,396,720 - 234,424,015 (+)NCBIHuRef
CHM1_12242,647,558 - 242,674,989 (+)NCBICHM1_1
T2T-CHM13v2.02242,190,352 - 242,233,501 (+)NCBIT2T-CHM13v2.0
Ing5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39193,731,648 - 93,749,823 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl193,731,687 - 93,749,823 (+)EnsemblGRCm39 Ensembl
GRCm38193,803,926 - 93,822,101 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl193,803,965 - 93,822,101 (+)EnsemblGRCm38mm10GRCm38
MGSCv37195,700,542 - 95,718,678 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36195,634,371 - 95,652,507 (+)NCBIMGSCv36mm8
Celera196,750,076 - 96,766,171 (+)NCBICelera
Cytogenetic Map1DNCBI
cM Map147.34NCBI
Ing5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr89101,772,845 - 101,793,734 (+)NCBIGRCr8
mRatBN7.2994,326,549 - 94,343,392 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl994,326,548 - 94,344,220 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx9102,762,026 - 102,778,869 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.09107,897,415 - 107,914,334 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.09106,253,524 - 106,270,444 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.09100,932,932 - 100,950,233 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl9100,932,545 - 100,952,416 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.09100,586,087 - 100,603,189 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4993,076,701 - 93,094,002 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1993,281,098 - 93,298,207 (+)NCBI
Celera991,861,169 - 91,878,610 (+)NCBICelera
Cytogenetic Map9q36NCBI
Ing5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955542132,560 - 148,138 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955542135,634 - 160,991 (-)NCBIChiLan1.0ChiLan1.0
ING5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213144,396,425 - 144,439,598 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B144,426,265 - 144,451,842 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B128,979,282 - 129,007,476 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B247,769,128 - 247,793,902 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B247,755,552 - 247,793,893 (+)Ensemblpanpan1.1panPan2
ING5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12551,535,521 - 51,556,264 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2551,534,753 - 51,554,644 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2551,754,641 - 51,775,295 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02551,734,300 - 51,754,948 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2551,734,356 - 51,756,582 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12551,584,130 - 51,604,831 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02551,323,352 - 51,344,051 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02551,600,060 - 51,621,179 (+)NCBIUU_Cfam_GSD_1.0
Ing5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303192,946,863 - 192,962,731 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936745261,450 - 271,943 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936745261,371 - 271,447 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ING5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110127,733,768 - 127,770,794 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10127,746,546 - 127,774,244 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604071,550,856 - 71,575,851 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ing5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248475,648,233 - 5,662,044 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248475,648,199 - 5,659,038 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ING5
206 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium
Low 10 4 3 5 2 23 2 3 3
Below cutoff

Sequence


RefSeq Acc Id: ENSSSCT00000042733   ⟹   ENSSSCP00000051374
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl15140,264,766 - 140,279,010 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000055185   ⟹   ENSSSCP00000045993
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl15140,264,732 - 140,280,190 (+)Ensembl
RefSeq Acc Id: XM_021075111   ⟹   XP_020930770
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.115140,264,708 - 140,279,020 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021075112   ⟹   XP_020930771
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.115140,264,711 - 140,279,020 (+)NCBI
Sequence:
RefSeq Acc Id: XP_020930770   ⟸   XM_021075111
- Peptide Label: isoform X1
- UniProtKB: A0A8D1HML5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020930771   ⟸   XM_021075112
- Peptide Label: isoform X2
- UniProtKB: A0A4X1SVV1 (UniProtKB/TrEMBL),   A0A287B5K2 (UniProtKB/TrEMBL),   A0A480QB10 (UniProtKB/TrEMBL),   A0A8D1HML5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000045993   ⟸   ENSSSCT00000055185
RefSeq Acc Id: ENSSSCP00000051374   ⟸   ENSSSCT00000042733
Protein Domains
PHD-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000032505 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00025058275 UniProtKB/TrEMBL
  ENSSSCG00030024687 UniProtKB/TrEMBL
  ENSSSCG00035067907 UniProtKB/TrEMBL
  ENSSSCG00040071495 UniProtKB/TrEMBL
  ENSSSCG00045017219 UniProtKB/TrEMBL
  ENSSSCG00050026628 UniProtKB/TrEMBL
  ENSSSCG00055022807 UniProtKB/TrEMBL
  ENSSSCG00060063558 UniProtKB/TrEMBL
  ENSSSCG00070004640 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000042733 ENTREZGENE
  ENSSSCT00000042733.3 UniProtKB/TrEMBL
  ENSSSCT00025079736.1 UniProtKB/TrEMBL
  ENSSSCT00030034441.1 UniProtKB/TrEMBL
  ENSSSCT00035091612.1 UniProtKB/TrEMBL
  ENSSSCT00040098244.1 UniProtKB/TrEMBL
  ENSSSCT00045029282.1 UniProtKB/TrEMBL
  ENSSSCT00050035799.1 UniProtKB/TrEMBL
  ENSSSCT00055044827.1 UniProtKB/TrEMBL
  ENSSSCT00060086693.1 UniProtKB/TrEMBL
  ENSSSCT00070008772.1 UniProtKB/TrEMBL
  ENSSSCT00070008778.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.40.10 UniProtKB/TrEMBL
  6.10.140.1740 UniProtKB/TrEMBL
InterPro ING_fam UniProtKB/TrEMBL
  ING_N_histone_binding UniProtKB/TrEMBL
  Zinc_finger_PHD-type_CS UniProtKB/TrEMBL
  Znf_FYVE_PHD UniProtKB/TrEMBL
  Znf_PHD UniProtKB/TrEMBL
  Znf_PHD-finger UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
NCBI Gene ING5 ENTREZGENE
PANTHER PTHR10333 UniProtKB/TrEMBL
  PTHR10333:SF41 UniProtKB/TrEMBL
Pfam ING UniProtKB/TrEMBL
PROSITE ZF_PHD_1 UniProtKB/TrEMBL
  ZF_PHD_2 UniProtKB/TrEMBL
SMART ING UniProtKB/TrEMBL
  PHD UniProtKB/TrEMBL
Superfamily-SCOP SSF57903 UniProtKB/TrEMBL
UniProt A0A287B5K2 ENTREZGENE
  A0A480QB10 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1SVV1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1HML5 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A287B5K2 UniProtKB/TrEMBL
VGNC ID VGNC:95912 ENTREZGENE