MRPL51 (mitochondrial ribosomal protein L51) - Rat Genome Database

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Gene: MRPL51 (mitochondrial ribosomal protein L51) Sus scrofa
Analyze
Symbol: MRPL51
Name: mitochondrial ribosomal protein L51
RGD ID: 13870216
Description: ENCODES a protein that exhibits structural constituent of ribosome (inferred); INVOLVED IN translation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); Hyperphosphatemic Familial Tumoral Calcinosis 1 (ortholog); FOUND IN mitochondrial large ribosomal subunit (inferred); mitochondrial ribosome (inferred); mitochondrion (inferred); INTERACTS WITH deoxynivalenol
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 39S ribosomal protein L51, mitochondrial
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl564,167,200 - 64,168,983 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1564,167,418 - 64,168,986 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2566,630,184 - 66,630,515 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
translation  (IEA,ISO)

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
MRPL51
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl564,167,200 - 64,168,983 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1564,167,418 - 64,168,986 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2566,630,184 - 66,630,515 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MRPL51
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38126,491,886 - 6,493,262 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl126,491,886 - 6,493,841 (-)EnsemblGRCh38hg38GRCh38
GRCh37126,601,052 - 6,602,428 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36126,471,577 - 6,472,718 (-)NCBINCBI36Build 36hg18NCBI36
Build 34126,471,578 - 6,472,718NCBI
Celera128,218,232 - 8,219,387 (-)NCBICelera
Cytogenetic Map12p13.31NCBI
HuRef126,455,511 - 6,456,666 (-)NCBIHuRef
CHM1_1126,600,329 - 6,601,484 (-)NCBICHM1_1
T2T-CHM13v2.0126,502,237 - 6,503,613 (-)NCBIT2T-CHM13v2.0
Mrpl51
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396125,169,163 - 125,171,355 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6125,168,764 - 125,173,232 (+)EnsemblGRCm39 Ensembl
GRCm386125,192,200 - 125,194,392 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6125,191,801 - 125,196,269 (+)EnsemblGRCm38mm10GRCm38
MGSCv376125,142,218 - 125,144,410 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366125,157,819 - 125,160,011 (+)NCBIMGSCv36mm8
Celera6126,862,086 - 126,864,286 (+)NCBICelera
Cytogenetic Map6F3NCBI
cM Map659.32NCBI
Mrpl51
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84159,677,988 - 159,681,650 (+)NCBIGRCr8
mRatBN7.24157,991,756 - 157,994,715 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4157,992,408 - 157,995,414 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4164,220,833 - 164,223,782 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04160,003,748 - 160,006,698 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04158,639,714 - 158,642,678 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04157,705,790 - 157,709,452 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4157,705,790 - 157,708,748 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04224,722,975 - 224,726,637 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44161,311,611 - 161,314,569 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14161,557,230 - 161,558,448 (+)NCBI
Celera4146,728,787 - 146,731,745 (+)NCBICelera
Cytogenetic Map4q42NCBI
Mrpl51
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554134,135,206 - 4,136,392 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554134,135,206 - 4,136,392 (-)NCBIChiLan1.0ChiLan1.0
MRPL51
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21012,053,306 - 12,054,427 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11212,050,063 - 12,051,108 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0126,622,334 - 6,623,502 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1126,539,516 - 6,540,959 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl126,539,516 - 6,540,959 (-)Ensemblpanpan1.1panPan2
MRPL51
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12738,497,499 - 38,499,089 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2738,497,499 - 38,499,067 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha278,117,578 - 8,119,351 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02738,851,886 - 38,853,660 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2738,852,470 - 38,854,648 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12738,723,887 - 38,725,661 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02738,765,432 - 38,767,206 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0277,596,052 - 7,598,046 (-)NCBIUU_Cfam_GSD_1.0
Mrpl51
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945102,608,330 - 102,609,476 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367091,275,890 - 1,277,025 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367091,275,888 - 1,277,025 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MRPL51
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1116,532,418 - 6,534,101 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl116,532,431 - 6,533,536 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660631,692,312 - 1,693,987 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mrpl51
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248603,228,155 - 3,229,036 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248603,228,155 - 3,229,037 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in MRPL51
38 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 10 4 3 5 2 23 2 3 3
Low
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000065434   ⟹   ENSSSCP00000054368
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl564,167,200 - 64,168,983 (+)Ensembl
RefSeq Acc Id: XM_021092433   ⟹   XP_020948092
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1564,167,418 - 64,168,986 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_020948092   ⟸   XM_021092433
- UniProtKB: A0A8D1P1C8 (UniProtKB/TrEMBL),   A0A287BE26 (UniProtKB/TrEMBL),   A0A4X1UUV6 (UniProtKB/TrEMBL),   A0A8D1VKN8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000054368   ⟸   ENSSSCT00000065434


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000039662 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005038906 UniProtKB/TrEMBL
  ENSSSCG00015072391 UniProtKB/TrEMBL
  ENSSSCG00025033790 UniProtKB/TrEMBL
  ENSSSCG00030036531 UniProtKB/TrEMBL
  ENSSSCG00035081096 UniProtKB/TrEMBL
  ENSSSCG00040066672 UniProtKB/TrEMBL
  ENSSSCG00045018707 UniProtKB/TrEMBL
  ENSSSCG00050074858 UniProtKB/TrEMBL
  ENSSSCG00055018134 UniProtKB/TrEMBL
  ENSSSCG00060044076 UniProtKB/TrEMBL
  ENSSSCG00065077096 UniProtKB/TrEMBL
  ENSSSCG00070019637 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000065434 ENTREZGENE
  ENSSSCT00000065434.2 UniProtKB/TrEMBL
  ENSSSCT00005062330.1 UniProtKB/TrEMBL
  ENSSSCT00015097263.1 UniProtKB/TrEMBL
  ENSSSCT00025046016.1 UniProtKB/TrEMBL
  ENSSSCT00030050792.1 UniProtKB/TrEMBL
  ENSSSCT00035111429.1 UniProtKB/TrEMBL
  ENSSSCT00040091123.1 UniProtKB/TrEMBL
  ENSSSCT00045031824.1 UniProtKB/TrEMBL
  ENSSSCT00050102475.1 UniProtKB/TrEMBL
  ENSSSCT00055035594.1 UniProtKB/TrEMBL
  ENSSSCT00060059779.1 UniProtKB/TrEMBL
  ENSSSCT00065106597.1 UniProtKB/TrEMBL
  ENSSSCT00070038810.1 UniProtKB/TrEMBL
InterPro Ribosomal_L51_mit UniProtKB/TrEMBL
NCBI Gene MRPL51 ENTREZGENE
PANTHER 39S RIBOSOMAL PROTEIN L51, MITOCHONDRIAL UniProtKB/TrEMBL
  PTHR13409 UniProtKB/TrEMBL
Pfam MRP-L51 UniProtKB/TrEMBL
UniProt A0A287BE26 ENTREZGENE
  A0A4X1UUV6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1P1C8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1VKN8 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A287BE26 UniProtKB/TrEMBL
VGNC ID VGNC:90374 ENTREZGENE