LOC102168060 (stimulated by retinoic acid gene 6 protein-like) - Rat Genome Database

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Gene: LOC102168060 (stimulated by retinoic acid gene 6 protein-like) Sus scrofa
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Symbol: LOC102168060
Name: stimulated by retinoic acid gene 6 protein-like
RGD ID: 13868938
Description: ENCODES a protein that exhibits retinol transmembrane transporter activity (inferred); signaling receptor activity (inferred); INVOLVED IN establishment of localization in cell (inferred); retinol transport (inferred); vitamin A import into cell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11239,131,074 - 239,202,706 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21267,185,185 - 267,259,245 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)
plasma membrane  (IBA,IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in LOC102168060
2746 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
7 9 1 2 6 1 9 2 2 1

Sequence


RefSeq Acc Id: XM_021066260   ⟹   XP_020921919
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11239,131,076 - 239,202,706 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002336826
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11239,131,074 - 239,202,706 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_020921919 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000036858
  ENSSSCP00000036858.3
  ENSSSCP00035032561.1
  ENSSSCP00065041030.1
  ENSSSCP00070031590.1
RefSeq Acc Id: XP_020921919   ⟸   XM_021066260
- UniProtKB: A0A4X1UTF9 (UniProtKB/TrEMBL)
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000040711 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00035059203 UniProtKB/TrEMBL
  ENSSSCG00065068284 UniProtKB/TrEMBL
  ENSSSCG00070018991 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000037077 ENTREZGENE
  ENSSSCT00000037077.3 UniProtKB/TrEMBL
  ENSSSCT00035079292.1 UniProtKB/TrEMBL
  ENSSSCT00065093752.1 UniProtKB/TrEMBL
  ENSSSCT00070037767.1 UniProtKB/TrEMBL
InterPro STRA6-like UniProtKB/TrEMBL
NCBI Gene LOC102168060 ENTREZGENE
PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 180 UniProtKB/TrEMBL
  STIMULATED BY RETINOIC ACID GENE 6 PROTEIN-LIKE UniProtKB/TrEMBL
Pfam RBP_receptor UniProtKB/TrEMBL
UniProt A0A286ZZG1_PIG UniProtKB/TrEMBL
  A0A4X1UTF9 ENTREZGENE, UniProtKB/TrEMBL