SAPCD2 (suppressor APC domain containing 2) - Rat Genome Database

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Gene: SAPCD2 (suppressor APC domain containing 2) Sus scrofa
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Symbol: SAPCD2
Name: suppressor APC domain containing 2
RGD ID: 13865996
Description: INVOLVED IN establishment of mitotic spindle orientation (ortholog); regulation of establishment of planar polarity (ortholog); symmetric cell division (ortholog); ASSOCIATED WITH autosomal dominant non-syndromic intellectual disability 8 (ortholog); Candidiasis, Familial, 2 (ortholog); COVID-19 (ortholog); FOUND IN apical cortex (inferred); apical junction complex (inferred); cytosol (inferred)
Type: protein-coding
RefSeq Status: MODEL
Also known as: suppressor APC domain-containing protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position: No map positions available.


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
SAPCD2
(Sus scrofa - pig)
No map positions available.
SAPCD2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl9137,062,127 - 137,070,557 (-)EnsemblGRCh38hg38GRCh38
GRCh389137,062,127 - 137,070,559 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh379139,956,579 - 139,965,009 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369139,076,585 - 139,084,849 (-)NCBINCBI36hg18NCBI36
Build 349137,232,612 - 137,240,865NCBI
Celera9110,469,998 - 110,478,498 (-)NCBI
Cytogenetic Map9q34.3NCBI
HuRef9109,416,325 - 109,424,724 (-)NCBIHuRef
CHM1_19140,105,341 - 140,113,747 (-)NCBICHM1_1
Sapcd2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39225,261,974 - 25,268,225 (+)NCBIGRCm39mm39
GRCm39 Ensembl225,262,333 - 25,268,225 (+)Ensembl
GRCm38225,372,035 - 25,378,213 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl225,372,321 - 25,378,213 (+)EnsemblGRCm38mm10GRCm38
MGSCv37225,227,841 - 25,233,733 (+)NCBIGRCm37mm9NCBIm37
MGSCv36225,194,330 - 25,217,374 (+)NCBImm8
Celera225,099,316 - 25,105,204 (+)NCBICelera
Cytogenetic Map2A3NCBI
Sapcd2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.238,186,089 - 8,195,119 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl38,187,266 - 8,192,546 (+)Ensembl
Rnor_6.032,590,355 - 2,597,283 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl32,591,331 - 2,596,583 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.032,572,744 - 2,577,997 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.433,538,477 - 3,543,730 (+)NCBIRGSC3.4rn4RGSC3.4
Celera33,013,398 - 3,018,651 (+)NCBICelera
Cytogenetic Map3p13NCBI
Sapcd2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555135,086,379 - 5,090,876 (-)NCBIChiLan1.0ChiLan1.0
SAPCD2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.19137,091,559 - 137,099,275 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v09108,122,658 - 108,132,397 (-)NCBIMhudiblu_PPA_v0panPan3
SAPCD2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1948,571,045 - 48,578,517 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl948,570,891 - 48,594,452 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha947,784,755 - 47,792,772 (+)NCBI
ROS_Cfam_1.0949,449,167 - 49,456,459 (+)NCBI
UMICH_Zoey_3.1948,225,429 - 48,233,433 (+)NCBI
UNSW_CanFamBas_1.0948,524,187 - 48,531,479 (+)NCBI
UU_Cfam_GSD_1.0948,571,456 - 48,579,474 (+)NCBI
Sapcd2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947202,481,287 - 202,486,112 (-)NCBI
SpeTri2.0NW_004936669888,911 - 893,981 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SAPCD2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1121,119,873 - 1,127,966 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl121,121,302 - 1,127,533 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660584,174,059 - 4,182,871 (-)NCBIVero_WHO_p1.0
Sapcd2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624760843,746 - 848,104 (+)NCBIHetGla_female_1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system hemolymphoid system nervous system respiratory system
High
Medium
Low 1
Below cutoff 5 1 5 1

Sequence


Protein Sequences
Protein RefSeqs XP_020936779 (Get FASTA)   NCBI Sequence Viewer  


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000032279 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000040058 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000056578 ENTREZGENE, UniProtKB/TrEMBL
InterPro Suppressor_APCD_1/2 UniProtKB/TrEMBL
NCBI Gene SAPCD2 ENTREZGENE
PANTHER PTHR14907 UniProtKB/TrEMBL
UniProt A0A287A7Z0_PIG UniProtKB/TrEMBL
VGNC ID VGNC:92578 ENTREZGENE