LOC100523890 (olfactory receptor 7A17-like) - Rat Genome Database

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Gene: LOC100523890 (olfactory receptor 7A17-like) Sus scrofa
Analyze
No known orthologs.
Symbol: LOC100523890
Name: olfactory receptor 7A17-like
RGD ID: 13858306
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1262,645,793 - 62,646,776 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2262,203,775 - 62,204,758 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)
plasma membrane  (IBA,IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in LOC100523890
12 total Variants

Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003123454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_003123454   ⟹   XP_003123502
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1262,645,793 - 62,646,776 (-)NCBI
Sequence:
RefSeq Acc Id: XP_003123502   ⟸   XM_003123454
- UniProtKB: A0A8D0KJR6 (UniProtKB/TrEMBL),   F1SAN5 (UniProtKB/TrEMBL),   A0A8D0RK71 (UniProtKB/TrEMBL),   A0A8D1R144 (UniProtKB/TrEMBL)
- Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000013831 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005041334 UniProtKB/TrEMBL
  ENSSSCG00015052366 UniProtKB/TrEMBL
  ENSSSCG00025025357 UniProtKB/TrEMBL
  ENSSSCG00030027662 UniProtKB/TrEMBL
  ENSSSCG00035067270 UniProtKB/TrEMBL
  ENSSSCG00040066637 UniProtKB/TrEMBL
  ENSSSCG00045017488 UniProtKB/TrEMBL
  ENSSSCG00050062898 UniProtKB/TrEMBL
  ENSSSCG00055016517 UniProtKB/TrEMBL
  ENSSSCG00060073746 UniProtKB/TrEMBL
  ENSSSCG00065024175 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000015109 ENTREZGENE
  ENSSSCT00000015109.3 UniProtKB/TrEMBL
  ENSSSCT00005066181.1 UniProtKB/TrEMBL
  ENSSSCT00015069656.1 UniProtKB/TrEMBL
  ENSSSCT00025034226.1 UniProtKB/TrEMBL
  ENSSSCT00030038670.1 UniProtKB/TrEMBL
  ENSSSCT00035090701.1 UniProtKB/TrEMBL
  ENSSSCT00040091020.1 UniProtKB/TrEMBL
  ENSSSCT00045029780.1 UniProtKB/TrEMBL
  ENSSSCT00050085662.1 UniProtKB/TrEMBL
  ENSSSCT00055032605.1 UniProtKB/TrEMBL
  ENSSSCT00060100807.1 UniProtKB/TrEMBL
  ENSSSCT00065032215.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
NCBI Gene LOC100523890 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 7C1 UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A8D0KJR6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0RK71 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0WAN2_PIG UniProtKB/TrEMBL
  A0A8D1R144 ENTREZGENE, UniProtKB/TrEMBL
  F1SAN5 ENTREZGENE, UniProtKB/TrEMBL