SP8 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 9 | 89,764,764 - 89,767,393 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 9 | 89,764,671 - 89,767,428 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 9 | 99,261,088 - 99,267,025 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
SP8 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 7 | 20,782,279 - 20,786,886 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 7 | 20,782,279 - 20,786,886 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 7 | 20,821,899 - 20,826,505 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 7 | 20,788,426 - 20,793,030 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 7 | 20,595,140 - 20,599,745 | NCBI | | | | | Celera | 7 | 20,807,385 - 20,812,013 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | p21.1 | NCBI | | | | | HuRef | 7 | 20,706,730 - 20,711,356 (-) | NCBI | | HuRef | | | CHM1_1 | 7 | 20,822,403 - 20,827,032 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 7 | 20,918,318 - 20,922,938 (-) | NCBI | | T2T-CHM13v2.0 | | | CRA_TCAGchr7v2 | 7 | 20,873,227 - 20,877,855 (-) | NCBI | | | | |
|
Sp8 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 12 | 118,809,968 - 118,816,313 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 12 | 118,810,064 - 118,816,311 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 12 | 118,846,288 - 118,852,578 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 12 | 118,846,329 - 118,852,576 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 12 | 120,084,802 - 120,091,051 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 12 | 113,073,063 - 113,078,083 (+) | NCBI | | MGSCv36 | mm8 | | MGSCv36 | 12 | 119,291,658 - 119,296,678 (+) | NCBI | | MGSCv36 | mm8 | | Cytogenetic Map | 12 | F2 | NCBI | | | | | cM Map | 12 | 63.48 | NCBI | | | | |
|
Sp8 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 6 | 145,959,219 - 145,961,824 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 6 | 139,816,258 - 139,818,865 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 139,814,819 - 139,823,168 (+) | Ensembl | | mRatBN7.2 Ensembl | | | mRatBN7.2 Ensembl | 6 | 139,814,819 - 139,823,168 (+) | NCBI | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 6 | 143,268,110 - 143,270,717 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 6 | 139,885,580 - 139,888,181 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 6 | 140,432,005 - 140,434,612 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 6 | 146,784,915 - 146,789,439 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 6 | 146,784,915 - 146,787,518 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 6 | 155,693,431 - 155,696,034 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 6 | 146,169,226 - 146,171,829 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 6 | 146,176,505 - 146,177,966 (+) | NCBI | | | | | Celera | 6 | 137,463,142 - 137,465,745 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | q33 | NCBI | | | | |
|
Sp8 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955410 | 23,401,971 - 23,403,423 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955410 | 23,401,888 - 23,404,654 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
SP8 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 6 | 25,635,414 - 25,642,609 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 7 | 73,960,141 - 73,967,336 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 7 | 21,456,649 - 21,463,844 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 7 | 20,772,300 - 20,778,071 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
|
SP8 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 14 | 34,786,296 - 34,791,495 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 14 | 34,331,138 - 34,335,254 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 14 | 34,714,812 - 34,718,933 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 14 | 34,715,197 - 34,719,048 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 14 | 34,834,295 - 34,838,397 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 14 | 34,534,781 - 34,538,889 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 14 | 34,869,616 - 34,873,731 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Sp8 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405118 | 79,066,307 - 79,071,700 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936546 | 6,744,209 - 6,746,797 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936546 | 6,744,209 - 6,746,797 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
SP8 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 21 | 37,453,667 - 37,467,434 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 21 | 37,462,097 - 37,464,588 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666042 | 67,109,219 - 67,114,713 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Sp8 (Heterocephalus glaber - naked mole-rat) |
|