LOC100511343 (platelet glycoprotein 4-like) - Rat Genome Database

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Pathways
Gene: LOC100511343 (platelet glycoprotein 4-like) Sus scrofa
Analyze
No known orthologs.
Symbol: LOC100511343 (Ensembl: CD36)
Name: platelet glycoprotein 4-like (Ensembl:CD36 molecule)
RGD ID: 13846680
Description: INVOLVED IN cell adhesion (inferred); lipid transport (inferred); FOUND IN apical plasma membrane (inferred); Golgi apparatus (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl999,605,181 - 99,782,105 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1999,601,863 - 99,670,275 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29109,954,395 - 110,022,816 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Variants

.
Variants in LOC100511343
2036 total Variants

Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_003130227   ⟹   XP_003130275
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1999,601,863 - 99,663,189 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005667697   ⟹   XP_005667754
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1999,601,863 - 99,670,275 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005667698   ⟹   XP_005667755
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1999,601,863 - 99,670,210 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021063491   ⟹   XP_020919150
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1999,601,863 - 99,663,107 (-)NCBI
Sequence:
RefSeq Acc Id: XP_005667754   ⟸   XM_005667697
- UniProtKB: I3LMQ0 (UniProtKB/TrEMBL),   A0A4X1SJP5 (UniProtKB/TrEMBL),   K7GKS0 (UniProtKB/TrEMBL),   I3LB17 (UniProtKB/TrEMBL),   A0A8D0WW44 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005667755   ⟸   XM_005667698
- UniProtKB: I3LMQ0 (UniProtKB/TrEMBL),   A0A4X1SJP5 (UniProtKB/TrEMBL),   K7GKS0 (UniProtKB/TrEMBL),   I3LB17 (UniProtKB/TrEMBL),   A0A8D0WW44 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003130275   ⟸   XM_003130227
- UniProtKB: I3LMQ0 (UniProtKB/TrEMBL),   A0A4X1SJP5 (UniProtKB/TrEMBL),   K7GKS0 (UniProtKB/TrEMBL),   I3LB17 (UniProtKB/TrEMBL),   A0A8D0WW44 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020919150   ⟸   XM_021063491
- UniProtKB: A0A4X1SJP5 (UniProtKB/TrEMBL),   K7GKS0 (UniProtKB/TrEMBL),   I3LB17 (UniProtKB/TrEMBL),   I3LMQ0 (UniProtKB/TrEMBL),   A0A8D0WW44 (UniProtKB/TrEMBL)
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000015405 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00025052182 UniProtKB/TrEMBL
  ENSSSCG00030044434 UniProtKB/TrEMBL
  ENSSSCG00055019978 UniProtKB/TrEMBL
  ENSSSCG00070000954 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000022872 ENTREZGENE
  ENSSSCT00000022872.4 UniProtKB/TrEMBL
  ENSSSCT00000028271.4 UniProtKB/TrEMBL
  ENSSSCT00000034741.4 UniProtKB/TrEMBL
  ENSSSCT00000034797.4 UniProtKB/TrEMBL
  ENSSSCT00000035508.4 UniProtKB/TrEMBL
  ENSSSCT00000067483 ENTREZGENE
  ENSSSCT00000067483.2 UniProtKB/TrEMBL
  ENSSSCT00025071601.1 UniProtKB/TrEMBL
  ENSSSCT00030062519.1 UniProtKB/TrEMBL
  ENSSSCT00055039179.1 UniProtKB/TrEMBL
  ENSSSCT00055039302.1 UniProtKB/TrEMBL
  ENSSSCT00055039406.1 UniProtKB/TrEMBL
  ENSSSCT00070002334.1 UniProtKB/TrEMBL
  ENSSSCT00070002410.1 UniProtKB/TrEMBL
  ENSSSCT00070002448.1 UniProtKB/TrEMBL
  ENSSSCT00070002524.1 UniProtKB/TrEMBL
  ENSSSCT00070002536.1 UniProtKB/TrEMBL
InterPro CD36/SCARB1/SNMP1 UniProtKB/TrEMBL
  CD36_fam UniProtKB/TrEMBL
KEGG Report ssc:100511343 UniProtKB/TrEMBL
NCBI Gene LOC100511343 ENTREZGENE
PANTHER PTHR11923 UniProtKB/TrEMBL
  PTHR11923:SF12 UniProtKB/TrEMBL
Pfam CD36 UniProtKB/TrEMBL
PRINTS CD36ANTIGEN UniProtKB/TrEMBL
  CD36FAMILY UniProtKB/TrEMBL
UniProt A0A4X1SI69_PIG UniProtKB/TrEMBL
  A0A4X1SIS6_PIG UniProtKB/TrEMBL
  A0A4X1SJH2_PIG UniProtKB/TrEMBL
  A0A4X1SJP5 ENTREZGENE, UniProtKB/TrEMBL
  A0A5G2RCP1_PIG UniProtKB/TrEMBL
  A0A5K1UBX5_PIG UniProtKB/TrEMBL
  A0A5K1UBX8_PIG UniProtKB/TrEMBL
  A0A5K1VA80_PIG UniProtKB/TrEMBL
  A0A5K1VA81_PIG UniProtKB/TrEMBL
  A0A8D0WW44 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1RC37_PIG UniProtKB/TrEMBL
  A0A8D1RCJ8_PIG UniProtKB/TrEMBL
  I3LB17 ENTREZGENE
  I3LMQ0 ENTREZGENE, UniProtKB/TrEMBL
  K7GKS0 ENTREZGENE
UniProt Secondary I3LB17 UniProtKB/TrEMBL
  K7GKS0 UniProtKB/TrEMBL