IGSF5 (immunoglobulin superfamily member 5)

Gene: IGSF5 (immunoglobulin superfamily member 5) Sus scrofa

Analyze

Symbol:

IGSF5

Name:

immunoglobulin superfamily member 5

RGD ID:

13843742

Description:

ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); Prostatic Neoplasms (ortholog); FOUND IN bicellular tight junction (inferred); cell surface (inferred); membrane (inferred); INTERACTS WITH deoxynivalenol; zearalenone

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	13	203,325,385 - 203,372,361 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	213,445,798 - 213,493,257 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

genetic disease (ISO)

Prostatic Neoplasms (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

deoxynivalenol (EXP)

zearalenone (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell-cell adhesion (IEA,ISO)

Cellular Component

bicellular tight junction (IEA)

cell surface (IEA)

membrane (IEA)

Molecular Function

PDZ domain binding (ISO)

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

IGSF5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	13	203,325,385 - 203,372,361 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	213,445,798 - 213,493,257 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

IGSF5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	21	39,711,771 - 39,802,081 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	21	39,745,183 - 39,802,081 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	21	41,117,110 - 41,174,008 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	21	40,039,204 - 40,095,893 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	21	26,314,757 - 26,371,484 (+)	NCBI		Celera
Cytogenetic Map	21	q22.2	NCBI
HuRef	21	26,586,615 - 26,643,328 (+)	NCBI		HuRef
CHM1_1	21	40,678,069 - 40,734,791 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	21	38,096,241 - 38,186,566 (+)	NCBI		T2T-CHM13v2.0

Igsf5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	96,162,676 - 96,266,772 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	96,162,868 - 96,223,321 (+)	Ensembl		GRCm39 Ensembl
GRCm38	16	96,361,479 - 96,465,572 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	96,361,668 - 96,422,121 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	96,583,364 - 96,643,728 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	96,466,704 - 96,508,938 (+)	NCBI		MGSCv36	mm8
Celera	16	97,438,053 - 97,498,945 (+)	NCBI		Celera
Cytogenetic Map	16	C4	NCBI
cM Map	16	56.93	NCBI

Igsf5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	49,155,990 - 49,198,872 (+)	NCBI		GRCr8
mRatBN7.2	11	35,686,513 - 35,729,396 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	35,686,705 - 35,741,129 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	44,337,555 - 44,379,045 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	37,008,927 - 37,050,415 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	36,161,291 - 36,203,722 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	36,736,580 - 36,779,614 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	36,736,586 - 36,779,615 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	40,264,840 - 40,305,321 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	36,698,885 - 36,755,559 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	36,756,473 - 36,813,146 (+)	NCBI
Celera	11	32,750,117 - 32,790,934 (-)	NCBI		Celera
Cytogenetic Map	11	q11	NCBI

Igsf5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955407	38,468,873 - 38,510,040 (+)	NCBI	ChiLan1.0	ChiLan1.0

IGSF5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	22	35,701,263 - 35,902,111 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	21	30,557,376 - 30,758,128 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	21	26,079,931 - 26,157,483 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	21	39,435,321 - 39,491,196 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

IGSF5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	31	34,438,959 - 34,482,869 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	31	34,442,719 - 34,482,142 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	31	33,716,206 - 33,760,110 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	31	33,951,242 - 33,995,344 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	31	33,954,973 - 33,994,947 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	31	33,822,278 - 33,864,850 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	31	33,827,115 - 33,870,991 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	31	34,319,272 - 34,363,166 (+)	NCBI		UU_Cfam_GSD_1.0

Igsf5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404971	33,911,941 - 33,939,814 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936500	3,518,884 - 3,553,071 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LOC103219032
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	83,696,203 - 83,733,061 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	83,694,619 - 83,732,133 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666054	11,584,378 - 11,598,979 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Igsf5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624745	24,280,360 - 24,330,509 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in IGSF5
2716 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system
High
Medium
Low	4	2	1			7	2	2
Below cutoff	1	2	2	2	1	5		1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005657158	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005657159	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021070993	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021070994	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021070996	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021070997	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021070998	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021070999	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000093	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01038590	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_005657158 ⟹ XP_005657215

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	13	203,325,385 - 203,372,361 (+)	NCBI

Sequence:

show sequence

TAAAGGCTTTTTTTTTTTTTTTTTTAACTTTATCTGTTGAATCTCCAGTGCCTTCAGTGTAAAA
ATAATCTTTCTGCCCAAGTGGCCTATTTTGGGGTGGCATATTCTAATCCCCGTCCACCGGCAGA
CAGCATTCTGCCCCCATCCCCCCAGCCCCGTTTATTTGCCTCAGGGTCTTACCCCAAGTACAGG
AATCCATACCTTCCGTGGGCACCTGTTCTGTGCAGACGCCCTTGACCTTGAGTCCCAGGACAGG
ATTAGAATGTGACTGTGACGAGGGAGACAAGCCAGAGAGCCACAAAGAACAGACAGTGAGAGAG
CAGACAGCTCCATCCATGCTGCTTTAGGATTTGGGGAATTTTCCAGGGATTGTCAAAGCTCCAT
AAAGCCAAGTTCCTTTTTGACTTCCGAGGAGCTGGGCGTGGGGTCTTGGAAGCCTGCAGAAAAC
CTCTTAGCTGTTCCCCTGCAAATGTACTTGACTTCTCAAGCTGCATTCCAGAGGACTTCACCCT
GAGGACTTTTTTTTTCTTTTACAAAAAACCTGTTCTGGAGGCTGCGTGGGAGCCTGGCTGGAAG
AAGGAACCGGCTCTGCCAGCCCCGGCGCCTGTGCTGGAGCCCGGCGAGCAAGGTCAGCCGGTGG
CCGGCCACGTCCATGGCCACGTCCCTGATCAGGAAGGGGTTGCAGGCCCCCGGCTGGAGCAGGA
GGGTGAGGAAGACTATGCGAGATGGAGGGCAGCTGCCGAGGCGTGCTGGCTGCGCTGGTCGTTC
TGGCTGGGCTGGCAGCTTGTGGATCCGGCAATGAAATCTTAGAGGGTCCCAGGAACGTCACGGT
GGTGAAGGGCTCGGAGGCTCGCTTCAACTGCACCATCTCCCAGGGCTGGAAGCTCATCATGTGG
GCTCTGAAAGGCACGGTGGTTCTGAGCGTCACGCCCACCGAGCCCATCATCACCAACGACCGAT
TCACGTCTGCAAGTTATGAAGAGGGCGGTAACTTCATCTCTGAGATGATCATCCATGACGTGCA
GCTCAGTGATGCCGGGCAGGTCAAATGCAGCCTCCAGAACAGTGACCGGGATGGATCCGCTTTC
CTTTCCGTCCAAGTCATGGGGGCGCTGCTCATTCCCGGAGGCAGCCTCGTAGTCCTTGCGGAAG
AGCCTTGTAATGTGACCTGCCGCGCTTGGGGCTGGACCCCACTCCCGGATATTTCCTGGGAGAT
CGGGGCTCCCGTGAGCCATTCGAGCTATGACTCTGCTCCGGAGCCCGATGACCTTCAAAGTGCA
GTGAGTGTCCTGGCTCTCACGCCACTGGGCAGTGGCTCTGTGACTTGTGTCGCGGACATGAAGG
GGCTGCCCCTGCAAGAGTCCGTAACTGTAAATCTTACGGTGGTTCAGCCTCCCTTGGGCAGTGT
TGATAAACCAGGTACGTCCTTGCCTACCTGGGCCATAGCTCTACTTGCAGTCTCACTGTCATTG
CTTTCCATCCTGATAATTGTTCTGATTATAATATTCTGCTGCTGTTGTGCCTCCAGGAGAGAGA
AAGAAGAGTCTAGTTATCAAAGTCAAATAAGGAAATCTGCAAGTGTGAAGACCAACACAGAAAC
TTTTCAGACAAAAAGTGGAAAAGAAAACTATGGCTACAGCTCAGACGAGCCAAGGACCACAACT
TCTCTGCCTCCGAAGGGCTCCGAATCCAGTGTTCCCGAGCAGCGCGGCAGCAGGCCACCTCACC
AGGGACTGGATCACCGCCAGCCGGGCCCAGCAAGTCGTCCACAGGTGTCCTTTAACGTGGCCAG
TCCTAAGAAGGTCAGGAATGCGACTTTGGTATAGTACAGGCGTCGCTTTGGCTGCACGTGGCTC
TTGGCTGATGACCCATGTTCCATCATCGCTGTCTGCCATCCTAAGGCTGGGCTCCAGCTGTGCC
ACCATGACCCAGAAGAAGCGACATTGGCGTTGTCTCAACAGATACCTCAGAGGGAGAAAGGGCA
TCCACTTTCCCAGCTTTTAAAGTGGATTTTGACCTTTAGAACTTTTCAAGATTTCAGCGCATTT
CGTATTTACTGGGTACAAGCTGCAAATTCATTGCAATCGTGTTTCCCATCACGCAACACTCCTG
CTTGCAACCCGACAACTGGTAGATGAGTCTATGTCCCACAGGACATGTAGGAAGATTTTATTAT
CTTAGGAGTTCCTGTTGTGGTGCAGCAGAAGCAAATCCAACTAGGAACCATGAGGTTGAGGGTT
TGATCCCTGGCCTCGCTCAGTGGGTTAAGGATCCGGCATTGCCGTGAACTGTGGTGTAGGTCGC
AGATGAGGCTCAGATCTGGTGTTACTGTGGCTGTGGTGTAGGCTGGCAGCTGCAGCTCTGATTC
AATCCCTAGCCTGGGACTCTCCAAATGCCGTGGGTGTGGCCCTAAAAAGACAAAGAAGAAGAAG
AAGAAGTTTTTATTATCTTAAATCCCATGAAGATGATATTTATGTATGTTTTATATATGTGGGT
AATATTGCATATTATTTGTGAAAAAAAAGGGGGATTAAAACTTAGGATCAATCAGACATTTAAA
ATTGCCCAGAAAATCAGAACTCATAGGTTATAAATGGTATTAAATGCTAAGGCTGATGTGCACT
AAAGCAAAATATCTTCTGATTTGGGGGTATTTCCGTGAAGACCTTGTTGTCATCTGCTGCCTTG
TCAGTTTTGCTCTCATGTCGTCAGATGCATTAAATGTGACCTATATTTCGTAGGCGTCCTACCC
CCAGCCATGAAAAAACTGGAGATGGGCAATATAGTCTTTCATAAATAAAAGCAAAAACACCAAA
AAA

hide sequence

RefSeq Acc Id:

XM_005657159 ⟹ XP_005657216

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	13	203,325,999 - 203,372,361 (+)	NCBI

Sequence:

show sequence

GCCCGGCGAGCAAGGTCAGCCGGTGGCCGGCCACGTCCATGGCCACGTCCCTGATCAGGAAGGG
GTTGCAGGCCCCCGGCTGGAGCAGGAGGGTGAGCACGGTCTGGATTCCCAGTGGCTGACAGATT
GCTTCCTGCCTTTCTGTGGGGAGAGCACAGAGGCAAGAGAGAGGCCTTGGGGGAACGGAGACCC
TTCGCTGAGGCCCCGAGGGGTGGACCCCCGGCCCCCGCCGAGGTGAGGAAGACTATGCGAGATG
GAGGGCAGCTGCCGAGGCGTGCTGGCTGCGCTGGTCGTTCTGGCTGGGCTGGCAGCTTGTGGAT
CCGGCAATGAAATCTTAGAGGGTCCCAGGAACGTCACGGTGGTGAAGGGCTCGGAGGCTCGCTT
CAACTGCACCATCTCCCAGGGCTGGAAGCTCATCATGTGGGCTCTGAAAGGCACGGTGGTTCTG
AGCGTCACGCCCACCGAGCCCATCATCACCAACGACCGATTCACGTCTGCAAGTTATGAAGAGG
GCGGTAACTTCATCTCTGAGATGATCATCCATGACGTGCAGCTCAGTGATGCCGGGCAGGTCAA
ATGCAGCCTCCAGAACAGTGACCGGGATGGATCCGCTTTCCTTTCCGTCCAAGTCATGGGGGCG
CTGCTCATTCCCGGAGGCAGCCTCGTAGTCCTTGCGGAAGAGCCTTGTAATGTGACCTGCCGCG
CTTGGGGCTGGACCCCACTCCCGGATATTTCCTGGGAGATCGGGGCTCCCGTGAGCCATTCGAG
CTATGACTCTGCTCCGGAGCCCGATGACCTTCAAAGTGCAGTGAGTGTCCTGGCTCTCACGCCA
CTGGGCAGTGGCTCTGTGACTTGTGTCGCGGACATGAAGGGGCTGCCCCTGCAAGAGTCCGTAA
CTGTAAATCTTACGGTGGTTCAGCCTCCCTTGGGCAGTGTTGATAAACCAGGTACGTCCTTGCC
TACCTGGGCCATAGCTCTACTTGCAGTCTCACTGTCATTGCTTTCCATCCTGATAATTGTTCTG
ATTATAATATTCTGCTGCTGTTGTGCCTCCAGGAGAGAGAAAGAAGAGTCTAGTTATCAAAGTC
AAATAAGGAAATCTGCAAGTGTGAAGACCAACACAGAAACTTTTCAGACAAAAAGTGGAAAAGA
AAACTATGGCTACAGCTCAGACGAGCCAAGGACCACAACTTCTCTGCCTCCGAAGGGCTCCGAA
TCCAGTGTTCCCGAGCAGCGCGGCAGCAGGCCACCTCACCAGGGACTGGATCACCGCCAGCCGG
GCCCAGCAAGTCGTCCACAGGTGTCCTTTAACGTGGCCAGTCCTAAGAAGGTCAGGAATGCGAC
TTTGGTATAGTACAGGCGTCGCTTTGGCTGCACGTGGCTCTTGGCTGATGACCCATGTTCCATC
ATCGCTGTCTGCCATCCTAAGGCTGGGCTCCAGCTGTGCCACCATGACCCAGAAGAAGCGACAT
TGGCGTTGTCTCAACAGATACCTCAGAGGGAGAAAGGGCATCCACTTTCCCAGCTTTTAAAGTG
GATTTTGACCTTTAGAACTTTTCAAGATTTCAGCGCATTTCGTATTTACTGGGTACAAGCTGCA
AATTCATTGCAATCGTGTTTCCCATCACGCAACACTCCTGCTTGCAACCCGACAACTGGTAGAT
GAGTCTATGTCCCACAGGACATGTAGGAAGATTTTATTATCTTAGGAGTTCCTGTTGTGGTGCA
GCAGAAGCAAATCCAACTAGGAACCATGAGGTTGAGGGTTTGATCCCTGGCCTCGCTCAGTGGG
TTAAGGATCCGGCATTGCCGTGAACTGTGGTGTAGGTCGCAGATGAGGCTCAGATCTGGTGTTA
CTGTGGCTGTGGTGTAGGCTGGCAGCTGCAGCTCTGATTCAATCCCTAGCCTGGGACTCTCCAA
ATGCCGTGGGTGTGGCCCTAAAAAGACAAAGAAGAAGAAGAAGAAGTTTTTATTATCTTAAATC
CCATGAAGATGATATTTATGTATGTTTTATATATGTGGGTAATATTGCATATTATTTGTGAAAA
AAAAGGGGGATTAAAACTTAGGATCAATCAGACATTTAAAATTGCCCAGAAAATCAGAACTCAT
AGGTTATAAATGGTATTAAATGCTAAGGCTGATGTGCACTAAAGCAAAATATCTTCTGATTTGG
GGGTATTTCCGTGAAGACCTTGTTGTCATCTGCTGCCTTGTCAGTTTTGCTCTCATGTCGTCAG
ATGCATTAAATGTGACCTATATTTCGTAGGCGTCCTACCCCCAGCCATGAAAAAACTGGAGATG
GGCAATATAGTCTTTCATAAATAAAAGCAAAAACACCAAAAAA

hide sequence

RefSeq Acc Id:

XM_021070993 ⟹ XP_020926652

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	13	203,325,999 - 203,372,361 (+)	NCBI

Sequence:

show sequence

GCCCGGCGAGCAAGGTCAGCCGGTGGCCGGCCACGTCCATGGCCACGTCCCTGATCAGGAAGGG
GTTGCAGGCCCCCGGCTGGAGCAGGAGGGTGAGCACGGTCTGGATTCCCAGTGGCTGACAGATT
GCTTCCTGCCTTTCTGTGGGGAGAGCACAGAGGCAAGAGAGAGGCCTTGGGGGAACGGAGACCC
TTCGCTGAGGCCCCGAGGGGTGGACCCCCGGCCCCCGCCGAGGTGAGGAAGACTATGCGAGATG
GAGGGCAGCTGCCGAGGCGTGCTGGCTGCGCTGGTCGTTCTGGCTGGGCTGGCAGGTTCCCAGA
GTCTCGGTGGAAATGGACTCCAGGTGTCCCAGGCCAGGGTCTCAGATCAGAGTTGCAGGAGACG
GGGAGATGGAGCATGCCAACCCCGGGGGTCATCAGCTTGTGGATCCGGCAATGAAATCTTAGAG
GGTCCCAGGAACGTCACGGTGGTGAAGGGCTCGGAGGCTCGCTTCAACTGCACCATCTCCCAGG
GCTGGAAGCTCATCATGTGGGCTCTGAAAGGCACGGTGGTTCTGAGCGTCACGCCCACCGAGCC
CATCATCACCAACGACCGATTCACGTCTGCAAGTTATGAAGAGGGCGGTAACTTCATCTCTGAG
ATGATCATCCATGACGTGCAGCTCAGTGATGCCGGGCAGGTCAAATGCAGCCTCCAGAACAGTG
ACCGGGATGGATCCGCTTTCCTTTCCGTCCAAGTCATGGGGGCGCTGCTCATTCCCGGAGGCAG
CCTCGTAGTCCTTGCGGAAGAGCCTTGTAATGTGACCTGCCGCGCTTGGGGCTGGACCCCACTC
CCGGATATTTCCTGGGAGATCGGGGCTCCCGTGAGCCATTCGAGCTATGACTCTGCTCCGGAGC
CCGATGACCTTCAAAGTGCAGTGAGTGTCCTGGCTCTCACGCCACTGGGCAGTGGCTCTGTGAC
TTGTGTCGCGGACATGAAGGGGCTGCCCCTGCAAGAGTCCGTAACTGTAAATCTTACGGTGGTT
CAGCCTCCCTTGGGCAGTGTTGATAAACCAGGTACGTCCTTGCCTACCTGGGCCATAGCTCTAC
TTGCAGTCTCACTGTCATTGCTTTCCATCCTGATAATTGTTCTGATTATAATATTCTGCTGCTG
TTGTGCCTCCAGGAGAGAGAAAGAAGAGTCTAGTTATCAAAGTCAAATAAGGAAATCTGCAAGT
GTGAAGACCAACACAGAAACTTTTCAGACAAAAAGTGGAAAAGAAAACTATGGCTACAGCTCAG
ACGAGCCAAGGACCACAACTTCTCTGCCTCCGAAGGGCTCCGAATCCAGTGTTCCCGAGCAGCG
CGGCAGCAGGCCACCTCACCAGGGACTGGATCACCGCCAGCCGGGCCCAGCAAGTCGTCCACAG
GTGTCCTTTAACGTGGCCAGTCCTAAGAAGGTCAGGAATGCGACTTTGGTATAGTACAGGCGTC
GCTTTGGCTGCACGTGGCTCTTGGCTGATGACCCATGTTCCATCATCGCTGTCTGCCATCCTAA
GGCTGGGCTCCAGCTGTGCCACCATGACCCAGAAGAAGCGACATTGGCGTTGTCTCAACAGATA
CCTCAGAGGGAGAAAGGGCATCCACTTTCCCAGCTTTTAAAGTGGATTTTGACCTTTAGAACTT
TTCAAGATTTCAGCGCATTTCGTATTTACTGGGTACAAGCTGCAAATTCATTGCAATCGTGTTT
CCCATCACGCAACACTCCTGCTTGCAACCCGACAACTGGTAGATGAGTCTATGTCCCACAGGAC
ATGTAGGAAGATTTTATTATCTTAGGAGTTCCTGTTGTGGTGCAGCAGAAGCAAATCCAACTAG
GAACCATGAGGTTGAGGGTTTGATCCCTGGCCTCGCTCAGTGGGTTAAGGATCCGGCATTGCCG
TGAACTGTGGTGTAGGTCGCAGATGAGGCTCAGATCTGGTGTTACTGTGGCTGTGGTGTAGGCT
GGCAGCTGCAGCTCTGATTCAATCCCTAGCCTGGGACTCTCCAAATGCCGTGGGTGTGGCCCTA
AAAAGACAAAGAAGAAGAAGAAGAAGTTTTTATTATCTTAAATCCCATGAAGATGATATTTATG
TATGTTTTATATATGTGGGTAATATTGCATATTATTTGTGAAAAAAAAGGGGGATTAAAACTTA
GGATCAATCAGACATTTAAAATTGCCCAGAAAATCAGAACTCATAGGTTATAAATGGTATTAAA
TGCTAAGGCTGATGTGCACTAAAGCAAAATATCTTCTGATTTGGGGGTATTTCCGTGAAGACCT
TGTTGTCATCTGCTGCCTTGTCAGTTTTGCTCTCATGTCGTCAGATGCATTAAATGTGACCTAT
ATTTCGTAGGCGTCCTACCCCCAGCCATGAAAAAACTGGAGATGGGCAATATAGTCTTTCATAA
ATAAAAGCAAAAACACCAAAAAA

hide sequence

RefSeq Acc Id:

XM_021070994 ⟹ XP_020926653

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	13	203,325,954 - 203,372,361 (+)	NCBI

Sequence:

show sequence

CTGGAAGAAGGAACCGGCTCTGCCAGCCCCGGCGCCTGTGCTGGAGCCCGGCGAGCAAGGTCAG
CCGGTGGCCGGCCACGTCCATGGCCACGTCCCTGATCAGGAAGGGGTTGCAGGCCCCCGGCTGG
AGCAGGAGGGTGAGGAAGACTATGCGAGATGGAGGGCAGCTGCCGAGGCGTGCTGGCTGCGCTG
GTCGTTCTGGCTGGGCTGGCAGGTTCCCAGAGTCTCGGTGGAAATGGACTCCAGGTGTCCCAGG
CCAGGGTCTCAGATCAGAGTTGCAGGAGACGGGGAGATGGAGCATGCCAACCCCGGGGGTCATC
AGCTTGTGGATCCGGCAATGAAATCTTAGAGGGTCCCAGGAACGTCACGGTGGTGAAGGGCTCG
GAGGCTCGCTTCAACTGCACCATCTCCCAGGGCTGGAAGCTCATCATGTGGGCTCTGAAAGGCA
CGGTGGTTCTGAGCGTCACGCCCACCGAGCCCATCATCACCAACGACCGATTCACGTCTGCAAG
TTATGAAGAGGGCGGTAACTTCATCTCTGAGATGATCATCCATGACGTGCAGCTCAGTGATGCC
GGGCAGGTCAAATGCAGCCTCCAGAACAGTGACCGGGATGGATCCGCTTTCCTTTCCGTCCAAG
TCATGGGGGCGCTGCTCATTCCCGGAGGCAGCCTCGTAGTCCTTGCGGAAGAGCCTTGTAATGT
GACCTGCCGCGCTTGGGGCTGGACCCCACTCCCGGATATTTCCTGGGAGATCGGGGCTCCCGTG
AGCCATTCGAGCTATGACTCTGCTCCGGAGCCCGATGACCTTCAAAGTGCAGTGAGTGTCCTGG
CTCTCACGCCACTGGGCAGTGGCTCTGTGACTTGTGTCGCGGACATGAAGGGGCTGCCCCTGCA
AGAGTCCGTAACTGTAAATCTTACGGTGGTTCAGCCTCCCTTGGGCAGTGTTGATAAACCAGGT
ACGTCCTTGCCTACCTGGGCCATAGCTCTACTTGCAGTCTCACTGTCATTGCTTTCCATCCTGA
TAATTGTTCTGATTATAATATTCTGCTGCTGTTGTGCCTCCAGGAGAGAGAAAGAAGAGTCTAG
TTATCAAAGTCAAATAAGGAAATCTGCAAGTGTGAAGACCAACACAGAAACTTTTCAGACAAAA
AGTGGAAAAGAAAACTATGGCTACAGCTCAGACGAGCCAAGGACCACAACTTCTCTGCCTCCGA
AGGGCTCCGAATCCAGTGTTCCCGAGCAGCGCGGCAGCAGGCCACCTCACCAGGGACTGGATCA
CCGCCAGCCGGGCCCAGCAAGTCGTCCACAGGTGTCCTTTAACGTGGCCAGTCCTAAGAAGGTC
AGGAATGCGACTTTGGTATAGTACAGGCGTCGCTTTGGCTGCACGTGGCTCTTGGCTGATGACC
CATGTTCCATCATCGCTGTCTGCCATCCTAAGGCTGGGCTCCAGCTGTGCCACCATGACCCAGA
AGAAGCGACATTGGCGTTGTCTCAACAGATACCTCAGAGGGAGAAAGGGCATCCACTTTCCCAG
CTTTTAAAGTGGATTTTGACCTTTAGAACTTTTCAAGATTTCAGCGCATTTCGTATTTACTGGG
TACAAGCTGCAAATTCATTGCAATCGTGTTTCCCATCACGCAACACTCCTGCTTGCAACCCGAC
AACTGGTAGATGAGTCTATGTCCCACAGGACATGTAGGAAGATTTTATTATCTTAGGAGTTCCT
GTTGTGGTGCAGCAGAAGCAAATCCAACTAGGAACCATGAGGTTGAGGGTTTGATCCCTGGCCT
CGCTCAGTGGGTTAAGGATCCGGCATTGCCGTGAACTGTGGTGTAGGTCGCAGATGAGGCTCAG
ATCTGGTGTTACTGTGGCTGTGGTGTAGGCTGGCAGCTGCAGCTCTGATTCAATCCCTAGCCTG
GGACTCTCCAAATGCCGTGGGTGTGGCCCTAAAAAGACAAAGAAGAAGAAGAAGAAGTTTTTAT
TATCTTAAATCCCATGAAGATGATATTTATGTATGTTTTATATATGTGGGTAATATTGCATATT
ATTTGTGAAAAAAAAGGGGGATTAAAACTTAGGATCAATCAGACATTTAAAATTGCCCAGAAAA
TCAGAACTCATAGGTTATAAATGGTATTAAATGCTAAGGCTGATGTGCACTAAAGCAAAATATC
TTCTGATTTGGGGGTATTTCCGTGAAGACCTTGTTGTCATCTGCTGCCTTGTCAGTTTTGCTCT
CATGTCGTCAGATGCATTAAATGTGACCTATATTTCGTAGGCGTCCTACCCCCAGCCATGAAAA
AACTGGAGATGGGCAATATAGTCTTTCATAAATAAAAGCAAAAACACCAAAAAA

hide sequence

RefSeq Acc Id:

XM_021070996 ⟹ XP_020926655

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	13	203,325,999 - 203,372,361 (+)	NCBI

Sequence:

show sequence

GCCCGGCGAGCAAGGTCAGCCGGTGGCCGGCCACGTCCATGGCCACGTCCCTGATCAGGAAGGG
GTTGCAGGCCCCCGGCTGGAGCAGGAGGGTGAGCACGGTCTGGATTCCCAGTGGCTGACAGATT
GCTTCCTGCCTTTCTGTGGGGAGAGCACAGAGGCAAGAGAGAGGCCTTGGGGGAACGGAGACCC
TTCGCTGAGGCCCCGAGGGGTGGACCCCCGGCCCCCGCCGAGGTGAGGAAGACTATGCGAGATG
GAGGGCAGCTGCCGAGGCGTGCTGGCTGCGCTGGTCGTTCTGGCTGGGCTGGCAGGTTCCCAGA
GTCTCGGTGGAAATGGACTCCAGGTGTCCCAGGCCAGGGTCTCAGATCAGAGTTGCAGGAGACG
GGGAGATGGAGCATGCCAACCCCGGGGGTCATCAGCTTGTGGATCCGGCAATGAAATCTTAGAG
GGTCCCAGGAACGTCACGGTGGTGAAGGGCTCGGAGGCTCGCTTCAACTGCACCATCTCCCAGG
GCTGGAAGCTCATCATGTGGGCTCTGAAAGGCACGGTGGTTCTGAGCGTCACGCCCACCGAGCC
CATCATCACCAACGACCGATTCACGTCTGCAAGTTATGAAGAGGGCGGTAACTTCATCTCTGAG
ATGATCATCCATGACGTGCAGCTCAGTGATGCCGGGCAGGTCAAATGCAGCCTCCAGAACAGTG
ACCGGGATGGATCCGCTTTCCTTTCCGTCCAAGTCATGGGGGCGCTGCTCATTCCCGGAGGCAG
CCTCGTAGTCCTTGCGGAAGAGCCTTGTAATGTGACCTGCCGCGCTTGGGGCTGGACCCCACTC
CCGGATATTTCCTGGGAGATCGGGGCTCCCGTGAGCCATTCGAGCTATGACTCTGCTCCGGAGC
CCGATGACCTTCAAAGTGCAGTGAGTGTCCTGGCTCTCACGCCACTGGGCAGTGGCTCTGTGAC
TTGTGTCGCGGACATGAAGGGGCTGCCCCTGCAAGAGTCCGTAACTGTAAATCTTACGGTGGTT
CAGCCTCCCTTGGGCAGTGTTGATAAACCAGAGTCTAGTTATCAAAGTCAAATAAGGAAATCTG
CAAGTGTGAAGACCAACACAGAAACTTTTCAGACAAAAAGTGGAAAAGAAAACTATGGCTACAG
CTCAGACGAGCCAAGGACCACAACTTCTCTGCCTCCGAAGGGCTCCGAATCCAGTGTTCCCGAG
CAGCGCGGCAGCAGGCCACCTCACCAGGGACTGGATCACCGCCAGCCGGGCCCAGCAAGTCGTC
CACAGGTGTCCTTTAACGTGGCCAGTCCTAAGAAGGTCAGGAATGCGACTTTGGTATAGTACAG
GCGTCGCTTTGGCTGCACGTGGCTCTTGGCTGATGACCCATGTTCCATCATCGCTGTCTGCCAT
CCTAAGGCTGGGCTCCAGCTGTGCCACCATGACCCAGAAGAAGCGACATTGGCGTTGTCTCAAC
AGATACCTCAGAGGGAGAAAGGGCATCCACTTTCCCAGCTTTTAAAGTGGATTTTGACCTTTAG
AACTTTTCAAGATTTCAGCGCATTTCGTATTTACTGGGTACAAGCTGCAAATTCATTGCAATCG
TGTTTCCCATCACGCAACACTCCTGCTTGCAACCCGACAACTGGTAGATGAGTCTATGTCCCAC
AGGACATGTAGGAAGATTTTATTATCTTAGGAGTTCCTGTTGTGGTGCAGCAGAAGCAAATCCA
ACTAGGAACCATGAGGTTGAGGGTTTGATCCCTGGCCTCGCTCAGTGGGTTAAGGATCCGGCAT
TGCCGTGAACTGTGGTGTAGGTCGCAGATGAGGCTCAGATCTGGTGTTACTGTGGCTGTGGTGT
AGGCTGGCAGCTGCAGCTCTGATTCAATCCCTAGCCTGGGACTCTCCAAATGCCGTGGGTGTGG
CCCTAAAAAGACAAAGAAGAAGAAGAAGAAGTTTTTATTATCTTAAATCCCATGAAGATGATAT
TTATGTATGTTTTATATATGTGGGTAATATTGCATATTATTTGTGAAAAAAAAGGGGGATTAAA
ACTTAGGATCAATCAGACATTTAAAATTGCCCAGAAAATCAGAACTCATAGGTTATAAATGGTA
TTAAATGCTAAGGCTGATGTGCACTAAAGCAAAATATCTTCTGATTTGGGGGTATTTCCGTGAA
GACCTTGTTGTCATCTGCTGCCTTGTCAGTTTTGCTCTCATGTCGTCAGATGCATTAAATGTGA
CCTATATTTCGTAGGCGTCCTACCCCCAGCCATGAAAAAACTGGAGATGGGCAATATAGTCTTT
CATAAATAAAAGCAAAAACACCAAAAAA

hide sequence

RefSeq Acc Id:

XM_021070997 ⟹ XP_020926656

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	13	203,325,999 - 203,372,361 (+)	NCBI

Sequence:

show sequence

GCCCGGCGAGCAAGGTCAGCCGGTGGCCGGCCACGTCCATGGCCACGTCCCTGATCAGGAAGGG
GTTGCAGGCCCCCGGCTGGAGCAGGAGGGTGAGCACGGTCTGGATTCCCAGTGGCTGACAGATT
GCTTCCTGCCTTTCTGTGGGGAGAGCACAGAGGCAAGAGAGAGGCCTTGGGGGAACGGAGACCC
TTCGCTGAGGCCCCGAGGGGTGGACCCCCGGCCCCCGCCGAGGTGAGGAAGACTATGCGAGATG
GAGGGCAGCTGCCGAGGCGTGCTGGCTGCGCTGGTCGTTCTGGCTGGGCTGGCAGGTTCCCAGA
GTCTCGGTGGAAATGGACTCCAGGTGTCCCAGGCCAGGGTCTCAGATCAGAGTTGCAGGAGACG
GGGAGATGGAGCATGCCAACCCCGGGGGTCATCAGCTTGTGGATCCGGCAATGAAATCTTAGAG
GGTCCCAGGAACGTCACGGTGGTGAAGGGCTCGGAGGCTCGCTTCAACTGCACCATCTCCCAGG
GCTGGAAGCTCATCATGTGGGCTCTGAAAGGCACGGTGGTTCTGAGCGTCACGCCCACCGAGCC
CATCATCACCAACGACCGATTCACGTCTGCAAGTTATGAAGAGGGCGGTAACTTCATCTCTGAG
ATGATCATCCATGACGTGCAGCTCAGTGATGCCGGGCAGGTCAAATGCAGCCTCCAGAACAGTG
ACCGGGATGGATCCGCTTTCCTTTCCGTCCAAGTCATGGGGGCGCTGCTCATTCCCGGAGGCAG
CCTCGTAGTCCTTGCGGAAGAGCCTTGTAATGTGACCTGCCGCGCTTGGGGCTGGACCCCACTC
CCGGATATTTCCTGGGAGATCGGGGCTCCCGTGAGCCATTCGAGCTATGACTCTGCTCCGGAGC
CCGATGACCTTCAAAGTGCAGTGAGTGTCCTGGCTCTCACGCCACTGGGCAGTGGCTCTGTGAC
TTGTGTCGCGGACATGAAGGGGCTGCCCCTGCAAGAGTCCGTAACTGTAAATCTTACGGTGGTT
CAGCCTCCCTTGGAGTCTAGTTATCAAAGTCAAATAAGGAAATCTGCAAGTGTGAAGACCAACA
CAGAAACTTTTCAGACAAAAAGTGGAAAAGAAAACTATGGCTACAGCTCAGACGAGCCAAGGAC
CACAACTTCTCTGCCTCCGAAGGGCTCCGAATCCAGTGTTCCCGAGCAGCGCGGCAGCAGGCCA
CCTCACCAGGGACTGGATCACCGCCAGCCGGGCCCAGCAAGTCGTCCACAGGTGTCCTTTAACG
TGGCCAGTCCTAAGAAGGTCAGGAATGCGACTTTGGTATAGTACAGGCGTCGCTTTGGCTGCAC
GTGGCTCTTGGCTGATGACCCATGTTCCATCATCGCTGTCTGCCATCCTAAGGCTGGGCTCCAG
CTGTGCCACCATGACCCAGAAGAAGCGACATTGGCGTTGTCTCAACAGATACCTCAGAGGGAGA
AAGGGCATCCACTTTCCCAGCTTTTAAAGTGGATTTTGACCTTTAGAACTTTTCAAGATTTCAG
CGCATTTCGTATTTACTGGGTACAAGCTGCAAATTCATTGCAATCGTGTTTCCCATCACGCAAC
ACTCCTGCTTGCAACCCGACAACTGGTAGATGAGTCTATGTCCCACAGGACATGTAGGAAGATT
TTATTATCTTAGGAGTTCCTGTTGTGGTGCAGCAGAAGCAAATCCAACTAGGAACCATGAGGTT
GAGGGTTTGATCCCTGGCCTCGCTCAGTGGGTTAAGGATCCGGCATTGCCGTGAACTGTGGTGT
AGGTCGCAGATGAGGCTCAGATCTGGTGTTACTGTGGCTGTGGTGTAGGCTGGCAGCTGCAGCT
CTGATTCAATCCCTAGCCTGGGACTCTCCAAATGCCGTGGGTGTGGCCCTAAAAAGACAAAGAA
GAAGAAGAAGAAGTTTTTATTATCTTAAATCCCATGAAGATGATATTTATGTATGTTTTATATA
TGTGGGTAATATTGCATATTATTTGTGAAAAAAAAGGGGGATTAAAACTTAGGATCAATCAGAC
ATTTAAAATTGCCCAGAAAATCAGAACTCATAGGTTATAAATGGTATTAAATGCTAAGGCTGAT
GTGCACTAAAGCAAAATATCTTCTGATTTGGGGGTATTTCCGTGAAGACCTTGTTGTCATCTGC
TGCCTTGTCAGTTTTGCTCTCATGTCGTCAGATGCATTAAATGTGACCTATATTTCGTAGGCGT
CCTACCCCCAGCCATGAAAAAACTGGAGATGGGCAATATAGTCTTTCATAAATAAAAGCAAAAA
CACCAAAAAA

hide sequence

RefSeq Acc Id:

XM_021070998 ⟹ XP_020926657

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	13	203,325,999 - 203,372,361 (+)	NCBI

Sequence:

show sequence

GCCCGGCGAGCAAGGTCAGCCGGTGGCCGGCCACGTCCATGGCCACGTCCCTGATCAGGAAGGG
GTTGCAGGCCCCCGGCTGGAGCAGGAGGGTGAGCACGGTCTGGATTCCCAGTGGCTGACAGATT
GCTTCCTGCCTTTCTGTGGGGAGAGCACAGAGGCAAGAGAGAGGCCTTGGGGGAACGGAGACCC
TTCGCTGAGGCCCCGAGGGGTGGACCCCCGGCCCCCGCCGAGGTGAGGAAGACTATGCGAGATG
GAGGGCAGCTGCCGAGGCGTGCTGGCTGCGCTGGTCGTTCTGGCTGGGCTGGCAGCTCCTCTTC
GTCCCGGAAGGTTCCCAGAGTCTCGGTGGAAATGGACTCCAGGTGTCCCAGGCCAGGGTCTCAG
ATCAGAGTTGCAGGAGACGGGGAGATGGAGCATGCCAACCCCGGGGGTCATCAGCTTGTGGATC
CGGCAATGAAATCTTAGAGGGTCCCAGGAACGTCACGGTGGTGAAGGGCTCGGAGGCTCGCTTC
AACTGCACCATCTCCCAGGGCTGGAAGCTCATCATGTGGGCTCTGAAAGGCACGGTGGTTCTGA
GCGTCACGCCCACCGAGCCCATCATCACCAACGACCGATTCACGTCTGCAAGTTATGAAGAGGG
CGGTAACTTCATCTCTGAGATGATCATCCATGACGTGCAGCTCAGTGATGCCGGGCAGGTCAAA
TGCAGCCTCCAGAACAGTGACCGGGATGGATCCGCTTTCCTTTCCGTCCAAGTCATGGGGGCGC
TGCTCATTCCCGGAGGCAGCCTCGTAGTCCTTGCGGAAGAGCCTTGTAATGTGACCTGCCGCGC
TTGGGGCTGGACCCCACTCCCGGATATTTCCTGGGAGATCGGGGCTCCCGTGAGCCATTCGAGC
TATGACTCTGCTCCGGAGCCCGATGACCTTCAAAGTGCAGTGAGTGTCCTGGCTCTCACGCCAC
TGGGCAGTGGCTCTGTGACTTGTGTCGCGGACATGAAGGGGCTGCCCCTGCAAGAGTCCGTAAC
TGTAAATCTTACGGTGGTTCAGCCTCCCTTGGGCAGTGTTGATAAACCAGGTACGTCCTTGCCT
ACCTGGGCCATAGCTCTACTTGCAGTCTCACTGTCATTGCTTTCCATCCTGATAATTGTTCTGA
TTATAATATTCTGCTGCTGTTGTGCCTCCAGGAGAGAGAAAGAAGAGTCTAGTTATCAAAGTCA
AATAAGGAAATCTGCAAGTGTGAAGACCAACACAGAAACTTTTCAGACAAAAAGTGGAAAAGAA
AACTATGGCTACAGCTCAGACGAGCCAAGGACCACAACTTCTCTGCCTCCGAAGGGCTCCGAAT
CCAGTGTTCCCGAGCAGCGCGGCAGCAGGCCACCTCACCAGGGACTGGATCACCGCCAGCCGGG
CCCAGCAAGTCGTCCACAGGTGTCCTTTAACGTGGCCAGTCCTAAGAAGGTCAGGAATGCGACT
TTGGTATAGTACAGGCGTCGCTTTGGCTGCACGTGGCTCTTGGCTGATGACCCATGTTCCATCA
TCGCTGTCTGCCATCCTAAGGCTGGGCTCCAGCTGTGCCACCATGACCCAGAAGAAGCGACATT
GGCGTTGTCTCAACAGATACCTCAGAGGGAGAAAGGGCATCCACTTTCCCAGCTTTTAAAGTGG
ATTTTGACCTTTAGAACTTTTCAAGATTTCAGCGCATTTCGTATTTACTGGGTACAAGCTGCAA
ATTCATTGCAATCGTGTTTCCCATCACGCAACACTCCTGCTTGCAACCCGACAACTGGTAGATG
AGTCTATGTCCCACAGGACATGTAGGAAGATTTTATTATCTTAGGAGTTCCTGTTGTGGTGCAG
CAGAAGCAAATCCAACTAGGAACCATGAGGTTGAGGGTTTGATCCCTGGCCTCGCTCAGTGGGT
TAAGGATCCGGCATTGCCGTGAACTGTGGTGTAGGTCGCAGATGAGGCTCAGATCTGGTGTTAC
TGTGGCTGTGGTGTAGGCTGGCAGCTGCAGCTCTGATTCAATCCCTAGCCTGGGACTCTCCAAA
TGCCGTGGGTGTGGCCCTAAAAAGACAAAGAAGAAGAAGAAGAAGTTTTTATTATCTTAAATCC
CATGAAGATGATATTTATGTATGTTTTATATATGTGGGTAATATTGCATATTATTTGTGAAAAA
AAAGGGGGATTAAAACTTAGGATCAATCAGACATTTAAAATTGCCCAGAAAATCAGAACTCATA
GGTTATAAATGGTATTAAATGCTAAGGCTGATGTGCACTAAAGCAAAATATCTTCTGATTTGGG
GGTATTTCCGTGAAGACCTTGTTGTCATCTGCTGCCTTGTCAGTTTTGCTCTCATGTCGTCAGA
TGCATTAAATGTGACCTATATTTCGTAGGCGTCCTACCCCCAGCCATGAAAAAACTGGAGATGG
GCAATATAGTCTTTCATAAATAAAAGCAAAAACACCAAAAAA

hide sequence

RefSeq Acc Id:

XM_021070999 ⟹ XP_020926658

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	13	203,325,999 - 203,372,361 (+)	NCBI

Sequence:

show sequence

GCCCGGCGAGCAAGGTCAGCCGGTGGCCGGCCACGTCCATGGCCACGTCCCTGATCAGGAAGGG
GTTGCAGGCCCCCGGCTGGAGCAGGAGGGTGAGCACGGTCTGGATTCCCAGTGGCTGACAGATT
GCTTCCTGCCTTTCTGTGGGGAGAGCACAGAGGCAAGAGAGAGGCCTTGGGGGAACGGAGACCC
TTCGCTGAGGCCCCGAGGGGTGGACCCCCGGCCCCCGCCGAGGTGAGGAAGACTATGCGAGATG
GAGGGCAGCTGCCGAGGCGTGCTGGCTGCGCTGGTCGTTCTGGCTGGGCTGGCAGGTTCCCAGA
GTCTCGGTGGAAATGGACTCCAGGTGTCCCAGGCCAGGGTCTCAGATCAGAGTTGCAGGAGACG
GGGAGATGGAGCATGCCAACCCCGGGGGTCATCAGCTTGTGGATCCGGCAATGAAATCTTAGAG
GGTCCCAGGAACGTCACGGTGGTGAAGGGCTCGGAGGCTCGCTTCAACTGCACCATCTCCCAGG
GCTGGAAGCTCATCATGTGGGCTCTGAAAGGCACGGTGGTTCTGAGCGTCACGCCCACCGAGCC
CATCATCACCAACGACCGATTCACGTCTGCAAGTTATGAAGAGGGCGGTAACTTCATCTCTGAG
ATGATCATCCATGACGTGCAGCTCAGTGATGCCGGGCAGGTCAAATGCAGCCTCCAGAACAGTG
ACCGGGATGGATCCGCTTTCCTTTCCGTCCAAGGCAGTGTTGATAAACCAGGTACGTCCTTGCC
TACCTGGGCCATAGCTCTACTTGCAGTCTCACTGTCATTGCTTTCCATCCTGATAATTGTTCTG
ATTATAATATTCTGCTGCTGTTGTGCCTCCAGGAGAGAGAAAGAAGAGTCTAGTTATCAAAGTC
AAATAAGGAAATCTGCAAGTGTGAAGACCAACACAGAAACTTTTCAGACAAAAAGTGGAAAAGA
AAACTATGGCTACAGCTCAGACGAGCCAAGGACCACAACTTCTCTGCCTCCGAAGGGCTCCGAA
TCCAGTGTTCCCGAGCAGCGCGGCAGCAGGCCACCTCACCAGGGACTGGATCACCGCCAGCCGG
GCCCAGCAAGTCGTCCACAGGTGTCCTTTAACGTGGCCAGTCCTAAGAAGGTCAGGAATGCGAC
TTTGGTATAGTACAGGCGTCGCTTTGGCTGCACGTGGCTCTTGGCTGATGACCCATGTTCCATC
ATCGCTGTCTGCCATCCTAAGGCTGGGCTCCAGCTGTGCCACCATGACCCAGAAGAAGCGACAT
TGGCGTTGTCTCAACAGATACCTCAGAGGGAGAAAGGGCATCCACTTTCCCAGCTTTTAAAGTG
GATTTTGACCTTTAGAACTTTTCAAGATTTCAGCGCATTTCGTATTTACTGGGTACAAGCTGCA
AATTCATTGCAATCGTGTTTCCCATCACGCAACACTCCTGCTTGCAACCCGACAACTGGTAGAT
GAGTCTATGTCCCACAGGACATGTAGGAAGATTTTATTATCTTAGGAGTTCCTGTTGTGGTGCA
GCAGAAGCAAATCCAACTAGGAACCATGAGGTTGAGGGTTTGATCCCTGGCCTCGCTCAGTGGG
TTAAGGATCCGGCATTGCCGTGAACTGTGGTGTAGGTCGCAGATGAGGCTCAGATCTGGTGTTA
CTGTGGCTGTGGTGTAGGCTGGCAGCTGCAGCTCTGATTCAATCCCTAGCCTGGGACTCTCCAA
ATGCCGTGGGTGTGGCCCTAAAAAGACAAAGAAGAAGAAGAAGAAGTTTTTATTATCTTAAATC
CCATGAAGATGATATTTATGTATGTTTTATATATGTGGGTAATATTGCATATTATTTGTGAAAA
AAAAGGGGGATTAAAACTTAGGATCAATCAGACATTTAAAATTGCCCAGAAAATCAGAACTCAT
AGGTTATAAATGGTATTAAATGCTAAGGCTGATGTGCACTAAAGCAAAATATCTTCTGATTTGG
GGGTATTTCCGTGAAGACCTTGTTGTCATCTGCTGCCTTGTCAGTTTTGCTCTCATGTCGTCAG
ATGCATTAAATGTGACCTATATTTCGTAGGCGTCCTACCCCCAGCCATGAAAAAACTGGAGATG
GGCAATATAGTCTTTCATAAATAAAAGCAAAAACACCAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005657215	(Get FASTA)	NCBI Sequence Viewer
	XP_005657216	(Get FASTA)	NCBI Sequence Viewer
	XP_020926652	(Get FASTA)	NCBI Sequence Viewer
	XP_020926653	(Get FASTA)	NCBI Sequence Viewer
	XP_020926655	(Get FASTA)	NCBI Sequence Viewer
	XP_020926656	(Get FASTA)	NCBI Sequence Viewer
	XP_020926657	(Get FASTA)	NCBI Sequence Viewer
	XP_020926658	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000038956
	ENSSSCP00000038956.3
	ENSSSCP00015012177.1
	ENSSSCP00035039027.1
	ENSSSCP00040010004.1
	ENSSSCP00045010463.1
	ENSSSCP00055048045.1
	ENSSSCP00065013120.1
	ENSSSCP00070016227.1

RefSeq Acc Id:	XP_005657215 ⟸ XM_005657158
- Peptide Label:	isoform X2
- UniProtKB:	A0A287A5B2 (UniProtKB/TrEMBL), A0A8D0N3H6 (UniProtKB/TrEMBL), A0A8D1K517 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEGSCRGVLAALVVLAGLAACGSGNEILEGPRNVTVVKGSEARFNCTISQGWKLIMWALKGTVV LSVTPTEPIITNDRFTSASYEEGGNFISEMIIHDVQLSDAGQVKCSLQNSDRDGSAFLSVQVMG ALLIPGGSLVVLAEEPCNVTCRAWGWTPLPDISWEIGAPVSHSSYDSAPEPDDLQSAVSVLALT PLGSGSVTCVADMKGLPLQESVTVNLTVVQPPLGSVDKPGTSLPTWAIALLAVSLSLLSILIIV LIIIFCCCCASRREKEESSYQSQIRKSASVKTNTETFQTKSGKENYGYSSDEPRTTTSLPPKGS ESSVPEQRGSRPPHQGLDHRQPGPASRPQVSFNVASPKKVRNATLV hide sequence

RefSeq Acc Id:	XP_020926653 ⟸ XM_021070994
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D0N3H6 (UniProtKB/TrEMBL), A0A8D1K517 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEGSCRGVLAALVVLAGLAGSQSLGGNGLQVSQARVSDQSCRRRGDGACQPRGSSACGSGNEIL EGPRNVTVVKGSEARFNCTISQGWKLIMWALKGTVVLSVTPTEPIITNDRFTSASYEEGGNFIS EMIIHDVQLSDAGQVKCSLQNSDRDGSAFLSVQVMGALLIPGGSLVVLAEEPCNVTCRAWGWTP LPDISWEIGAPVSHSSYDSAPEPDDLQSAVSVLALTPLGSGSVTCVADMKGLPLQESVTVNLTV VQPPLGSVDKPGTSLPTWAIALLAVSLSLLSILIIVLIIIFCCCCASRREKEESSYQSQIRKSA SVKTNTETFQTKSGKENYGYSSDEPRTTTSLPPKGSESSVPEQRGSRPPHQGLDHRQPGPASRP QVSFNVASPKKVRNATLV hide sequence

RefSeq Acc Id:	XP_020926657 ⟸ XM_021070998
- Peptide Label:	isoform X5
- UniProtKB:	A0A4X1TJM8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWALKGTVVLSVTPTEPIITNDRFTSASYEEGGNFISEMIIHDVQLSDAGQVKCSLQNSDRDGS AFLSVQVMGALLIPGGSLVVLAEEPCNVTCRAWGWTPLPDISWEIGAPVSHSSYDSAPEPDDLQ SAVSVLALTPLGSGSVTCVADMKGLPLQESVTVNLTVVQPPLGSVDKPGTSLPTWAIALLAVSL SLLSILIIVLIIIFCCCCASRREKEESSYQSQIRKSASVKTNTETFQTKSGKENYGYSSDEPRT TTSLPPKGSESSVPEQRGSRPPHQGLDHRQPGPASRPQVSFNVASPKKVRNATLV hide sequence

RefSeq Acc Id:	XP_020926652 ⟸ XM_021070993
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D0N3H6 (UniProtKB/TrEMBL), A0A8D1K517 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEGSCRGVLAALVVLAGLAGSQSLGGNGLQVSQARVSDQSCRRRGDGACQPRGSSACGSGNEIL EGPRNVTVVKGSEARFNCTISQGWKLIMWALKGTVVLSVTPTEPIITNDRFTSASYEEGGNFIS EMIIHDVQLSDAGQVKCSLQNSDRDGSAFLSVQVMGALLIPGGSLVVLAEEPCNVTCRAWGWTP LPDISWEIGAPVSHSSYDSAPEPDDLQSAVSVLALTPLGSGSVTCVADMKGLPLQESVTVNLTV VQPPLGSVDKPGTSLPTWAIALLAVSLSLLSILIIVLIIIFCCCCASRREKEESSYQSQIRKSA SVKTNTETFQTKSGKENYGYSSDEPRTTTSLPPKGSESSVPEQRGSRPPHQGLDHRQPGPASRP QVSFNVASPKKVRNATLV hide sequence

RefSeq Acc Id:	XP_020926655 ⟸ XM_021070996
- Peptide Label:	isoform X3
- UniProtKB:	A0A8D0N3H6 (UniProtKB/TrEMBL), A0A8D1K517 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEGSCRGVLAALVVLAGLAGSQSLGGNGLQVSQARVSDQSCRRRGDGACQPRGSSACGSGNEIL EGPRNVTVVKGSEARFNCTISQGWKLIMWALKGTVVLSVTPTEPIITNDRFTSASYEEGGNFIS EMIIHDVQLSDAGQVKCSLQNSDRDGSAFLSVQVMGALLIPGGSLVVLAEEPCNVTCRAWGWTP LPDISWEIGAPVSHSSYDSAPEPDDLQSAVSVLALTPLGSGSVTCVADMKGLPLQESVTVNLTV VQPPLGSVDKPESSYQSQIRKSASVKTNTETFQTKSGKENYGYSSDEPRTTTSLPPKGSESSVP EQRGSRPPHQGLDHRQPGPASRPQVSFNVASPKKVRNATLV hide sequence

RefSeq Acc Id:	XP_020926656 ⟸ XM_021070997
- Peptide Label:	isoform X4
- UniProtKB:	A0A8D0N3H6 (UniProtKB/TrEMBL), A0A8D1K517 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEGSCRGVLAALVVLAGLAGSQSLGGNGLQVSQARVSDQSCRRRGDGACQPRGSSACGSGNEIL EGPRNVTVVKGSEARFNCTISQGWKLIMWALKGTVVLSVTPTEPIITNDRFTSASYEEGGNFIS EMIIHDVQLSDAGQVKCSLQNSDRDGSAFLSVQVMGALLIPGGSLVVLAEEPCNVTCRAWGWTP LPDISWEIGAPVSHSSYDSAPEPDDLQSAVSVLALTPLGSGSVTCVADMKGLPLQESVTVNLTV VQPPLESSYQSQIRKSASVKTNTETFQTKSGKENYGYSSDEPRTTTSLPPKGSESSVPEQRGSR PPHQGLDHRQPGPASRPQVSFNVASPKKVRNATLV hide sequence

RefSeq Acc Id:

XP_020926658 ⟸ XM_021070999

- Peptide Label:

isoform X6

- Sequence:

show sequence

MEGSCRGVLAALVVLAGLAGSQSLGGNGLQVSQARVSDQSCRRRGDGACQPRGSSACGSGNEIL
EGPRNVTVVKGSEARFNCTISQGWKLIMWALKGTVVLSVTPTEPIITNDRFTSASYEEGGNFIS
EMIIHDVQLSDAGQVKCSLQNSDRDGSAFLSVQGSVDKPGTSLPTWAIALLAVSLSLLSILIIV
LIIIFCCCCASRREKEESSYQSQIRKSASVKTNTETFQTKSGKENYGYSSDEPRTTTSLPPKGS
ESSVPEQRGSRPPHQGLDHRQPGPASRPQVSFNVASPKKVRNATLV

hide sequence

RefSeq Acc Id:	XP_005657216 ⟸ XM_005657159
- Peptide Label:	isoform X2
- UniProtKB:	A0A287A5B2 (UniProtKB/TrEMBL), A0A8D0N3H6 (UniProtKB/TrEMBL), A0A8D1K517 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEGSCRGVLAALVVLAGLAACGSGNEILEGPRNVTVVKGSEARFNCTISQGWKLIMWALKGTVV LSVTPTEPIITNDRFTSASYEEGGNFISEMIIHDVQLSDAGQVKCSLQNSDRDGSAFLSVQVMG ALLIPGGSLVVLAEEPCNVTCRAWGWTPLPDISWEIGAPVSHSSYDSAPEPDDLQSAVSVLALT PLGSGSVTCVADMKGLPLQESVTVNLTVVQPPLGSVDKPGTSLPTWAIALLAVSLSLLSILIIV LIIIFCCCCASRREKEESSYQSQIRKSASVKTNTETFQTKSGKENYGYSSDEPRTTTSLPPKGS ESSVPEQRGSRPPHQGLDHRQPGPASRPQVSFNVASPKKVRNATLV hide sequence

Protein Domains

Ig-like

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000012071	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015023223	UniProtKB/TrEMBL
	ENSSSCG00035068869	UniProtKB/TrEMBL
	ENSSSCG00040017552	UniProtKB/TrEMBL
	ENSSSCG00045008909	UniProtKB/TrEMBL
	ENSSSCG00055030146	UniProtKB/TrEMBL
	ENSSSCG00065024058	UniProtKB/TrEMBL
	ENSSSCG00070010044	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000043723	ENTREZGENE
	ENSSSCT00000043723.3	UniProtKB/TrEMBL
	ENSSSCT00015030767.1	UniProtKB/TrEMBL
	ENSSSCT00035092974.1	UniProtKB/TrEMBL
	ENSSSCT00040023664.1	UniProtKB/TrEMBL
	ENSSSCT00045015070.1	UniProtKB/TrEMBL
	ENSSSCT00055059963.1	UniProtKB/TrEMBL
	ENSSSCT00065032034.1	UniProtKB/TrEMBL
	ENSSSCT00070019505.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
InterPro	Ig-like_dom	UniProtKB/TrEMBL
	Ig-like_dom_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig_I-set	UniProtKB/TrEMBL
	Ig_sub	UniProtKB/TrEMBL
KEGG Report	ssc:100517006	UniProtKB/TrEMBL
NCBI Gene	IGSF5	ENTREZGENE
PANTHER	IMMUNOGLOBULIN SUPERFAMILY MEMBER 5	UniProtKB/TrEMBL
	PTHR44991	UniProtKB/TrEMBL
Pfam	I-set	UniProtKB/TrEMBL
PROSITE	IG_LIKE	UniProtKB/TrEMBL
	PROKAR_LIPOPROTEIN	UniProtKB/TrEMBL
SMART	SM00409	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48726	UniProtKB/TrEMBL
UniProt	A0A287A5B2	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1TJM8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0N3H6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1D2T7_PIG	UniProtKB/TrEMBL
	A0A8D1GYW3_PIG	UniProtKB/TrEMBL
	A0A8D1K517	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:108667	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD