Slc25a30 (solute carrier family 25, member 30) - Rat Genome Database

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Gene: Slc25a30 (solute carrier family 25, member 30) Rattus norvegicus
Analyze
Symbol: Slc25a30
Name: solute carrier family 25, member 30
RGD ID: 1359702
Description: Predicted to enable solute:inorganic anion antiporter activity. Predicted to be involved in inorganic anion transport. Predicted to be located in mitochondrion. Orthologous to human SLC25A30 (solute carrier family 25 member 30); INTERACTS WITH 1-naphthyl isothiocyanate; 17beta-estradiol; 2,2',4,4'-Tetrabromodiphenyl ether.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: kidney mitochondrial carrier protein 1; solute carrier family 25 member 30
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81557,486,346 - 57,508,981 (-)NCBIGRCr8
mRatBN7.21551,076,998 - 51,099,613 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1551,077,002 - 51,099,613 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1555,235,194 - 55,257,774 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01556,353,517 - 56,376,096 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01553,173,751 - 53,198,616 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01557,811,612 - 57,834,173 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1557,813,356 - 57,834,173 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01561,520,775 - 61,541,280 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41556,656,204 - 56,695,237 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11556,671,984 - 56,711,017 (-)NCBI
Celera1550,706,833 - 50,726,329 (-)NCBICelera
Cytogenetic Map15q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
1-naphthyl isothiocyanate  (EXP)
17beta-estradiol  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
2-hydroxypropanoic acid  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (ISO)
acrylamide  (EXP)
Actein  (EXP)
aflatoxin B1  (EXP,ISO)
alpha-Zearalanol  (EXP)
amiodarone  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (EXP)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
bromobenzene  (EXP)
chlorpyrifos  (ISO)
choline  (ISO)
cisplatin  (ISO)
clofibrate  (EXP,ISO)
crocidolite asbestos  (ISO)
cyanocob(III)alamin  (ISO)
cyclosporin A  (ISO)
decabromodiphenyl ether  (EXP)
dexamethasone  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (EXP)
dichloroacetic acid  (ISO)
diclofenac  (ISO)
diethylstilbestrol  (EXP)
disodium selenite  (ISO)
diuron  (EXP)
dorsomorphin  (ISO)
entinostat  (ISO)
epoxiconazole  (ISO)
fenofibrate  (EXP)
fluoranthene  (ISO)
flutamide  (EXP)
folic acid  (ISO)
furan  (EXP)
gamma-hexachlorocyclohexane  (EXP)
gentamycin  (EXP)
glafenine  (EXP)
glycine betaine  (ISO)
indole-3-methanol  (EXP)
inulin  (ISO)
isoprenaline  (ISO)
L-methionine  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
methylmercury chloride  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
N-nitrosodimethylamine  (EXP)
nefazodone  (EXP)
nickel sulfate  (ISO)
oxycodone  (EXP)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP,ISO)
phenobarbital  (EXP,ISO)
pirinixic acid  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
quercetin  (ISO)
rac-lactic acid  (ISO)
riddelliine  (EXP)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (EXP)
sunitinib  (ISO)
tamoxifen  (ISO)
testosterone  (ISO)
tetrachloroethene  (ISO)
tetrachloromethane  (EXP,ISO)
tetracycline  (ISO)
thalidomide  (ISO)
titanium dioxide  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
troglitazone  (ISO)
valproic acid  (ISO)
vorinostat  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:15809292   PMID:18614015   PMID:19002213  


Genomics

Comparative Map Data
Slc25a30
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81557,486,346 - 57,508,981 (-)NCBIGRCr8
mRatBN7.21551,076,998 - 51,099,613 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1551,077,002 - 51,099,613 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1555,235,194 - 55,257,774 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01556,353,517 - 56,376,096 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01553,173,751 - 53,198,616 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01557,811,612 - 57,834,173 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1557,813,356 - 57,834,173 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01561,520,775 - 61,541,280 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41556,656,204 - 56,695,237 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11556,671,984 - 56,711,017 (-)NCBI
Celera1550,706,833 - 50,726,329 (-)NCBICelera
Cytogenetic Map15q11NCBI
SLC25A30
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381345,393,316 - 45,434,016 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1345,393,316 - 45,418,455 (-)EnsemblGRCh38hg38GRCh38
GRCh371345,967,451 - 45,992,508 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361344,868,044 - 44,890,515 (-)NCBINCBI36Build 36hg18NCBI36
Celera1327,022,161 - 27,047,226 (-)NCBICelera
Cytogenetic Map13q14.13NCBI
HuRef1326,765,682 - 26,790,829 (-)NCBIHuRef
CHM1_11345,934,266 - 45,959,317 (-)NCBICHM1_1
T2T-CHM13v2.01344,612,450 - 44,654,483 (-)NCBIT2T-CHM13v2.0
Slc25a30
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391475,994,986 - 76,024,477 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1475,997,557 - 76,024,477 (-)EnsemblGRCm39 Ensembl
GRCm381475,757,534 - 75,787,037 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1475,760,117 - 75,787,037 (-)EnsemblGRCm38mm10GRCm38
MGSCv371476,161,806 - 76,186,844 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361474,496,154 - 74,521,192 (-)NCBIMGSCv36mm8
Celera1473,263,844 - 73,288,538 (-)NCBICelera
Cytogenetic Map14D3NCBI
cM Map1440.29NCBI
Slc25a30
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555183,181,368 - 3,203,061 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555183,182,085 - 3,203,061 (+)NCBIChiLan1.0ChiLan1.0
SLC25A30
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21445,958,998 - 45,984,100 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11337,012,935 - 37,038,217 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01327,599,247 - 27,620,917 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
SLC25A30
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1225,636,039 - 5,664,027 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl225,638,583 - 5,658,025 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha225,625,215 - 5,650,141 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0225,753,817 - 5,778,738 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl225,753,819 - 5,781,718 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1225,535,918 - 5,560,836 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0225,599,116 - 5,623,991 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0225,604,521 - 5,629,456 (-)NCBIUU_Cfam_GSD_1.0
Slc25a30
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945155,620,200 - 155,640,319 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493685742,546 - 62,607 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493685742,509 - 61,764 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC25A30
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1323,456,446 - 23,528,246 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl323,503,005 - 23,525,625 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605720,531,975 - 20,557,564 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc25a30
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247489,567,769 - 9,583,023 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247489,564,872 - 9,589,266 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Slc25a30
136 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:258
Count of miRNA genes:179
Interacting mature miRNAs:203
Transcripts:ENSRNOT00000001389
Prediction methods:Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631273Lecl2Lens clarity QTL 20.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)151059608955596089Rat
1300144Rf23Renal function QTL 233.61renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)154063126898288169Rat
2300167Bmd63Bone mineral density QTL 635.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
1331729Rf42Renal function QTL 423.071kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)151736289773690657Rat
152025253Hrtrt24Heart rate QTL 243.82heart pumping trait (VT:2000009)152788577486257085Rat
724545Niddm54Non-insulin dependent diabetes mellitus QTL 540.02blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)155079449473699215Rat
10054130Srcrt8Stress Responsive Cort QTL 82.180.0085blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)152211793367117933Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)152803066582262678Rat
1582228Epfw3Epididymal fat weight QTL 34.10.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
2300173Bmd62Bone mineral density QTL 6212.80.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)152280624098288169Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)152280624098288169Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151672552880672115Rat
2293686Bmd36Bone mineral density QTL 367.40.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)153361105871477291Rat
1598828Glom14Glomerulus QTL 142.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)153405413979054139Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151249614165205939Rat
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)15155302115Rat
2293691Bmd37Bone mineral density QTL 376.60.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)153361105871477291Rat
2293688Bss29Bone structure and strength QTL 295.310.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)151111114256111142Rat
1582242Gluco28Glucose level QTL 283.30.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)152803066582262678Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)152280624098288169Rat
1582244Bw79Body weight QTL 7940.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
1582214Stl21Serum triglyceride level QTL 213.10.022blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)152803066582262678Rat

Markers in Region
AW319655  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21551,078,274 - 51,078,360 (+)MAPPERmRatBN7.2
Rnor_6.01557,812,889 - 57,812,974NCBIRnor6.0
Rnor_5.01561,520,313 - 61,520,398UniSTSRnor5.0
RGSC_v3.41556,655,742 - 56,655,827UniSTSRGSC3.4
Celera1550,706,371 - 50,706,456UniSTS
Cytogenetic Map15q11UniSTS
RH130235  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21551,078,740 - 51,078,924 (+)MAPPERmRatBN7.2
Rnor_6.01557,813,355 - 57,813,538NCBIRnor6.0
Rnor_5.01561,520,779 - 61,520,962UniSTSRnor5.0
RGSC_v3.41556,656,208 - 56,656,391UniSTSRGSC3.4
Celera1550,706,837 - 50,707,020UniSTS
Cytogenetic Map15q11UniSTS
RH131265  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21551,077,037 - 51,077,232 (+)MAPPERmRatBN7.2
Rnor_6.01557,811,652 - 57,811,846NCBIRnor6.0
Rnor_5.01561,519,076 - 61,519,270UniSTSRnor5.0
RGSC_v3.41556,654,505 - 56,654,699UniSTSRGSC3.4
Celera1550,705,134 - 50,705,328UniSTS
Cytogenetic Map15q11UniSTS
RH138497  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21551,078,333 - 51,078,483 (+)MAPPERmRatBN7.2
Rnor_6.01557,812,948 - 57,813,097NCBIRnor6.0
Rnor_5.01561,520,372 - 61,520,521UniSTSRnor5.0
RGSC_v3.41556,655,801 - 56,655,950UniSTSRGSC3.4
Celera1550,706,430 - 50,706,579UniSTS
Cytogenetic Map15q11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000001389   ⟹   ENSRNOP00000001389
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1551,078,724 - 51,099,613 (-)Ensembl
Rnor_6.0 Ensembl1557,813,356 - 57,834,173 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000104191   ⟹   ENSRNOP00000097957
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1551,077,002 - 51,099,585 (-)Ensembl
RefSeq Acc Id: NM_001013187   ⟹   NP_001013205
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81557,488,085 - 57,508,961 (-)NCBI
mRatBN7.21551,078,737 - 51,099,613 (-)NCBI
Rnor_6.01557,813,351 - 57,834,173 (-)NCBI
Rnor_5.01561,520,775 - 61,541,280 (-)NCBI
RGSC_v3.41556,656,204 - 56,695,237 (-)RGD
Celera1550,706,833 - 50,726,329 (-)RGD
Sequence:
RefSeq Acc Id: XM_008770873   ⟹   XP_008769095
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81557,486,346 - 57,508,981 (-)NCBI
mRatBN7.21551,076,998 - 51,095,877 (-)NCBI
Rnor_6.01557,811,612 - 57,830,356 (-)NCBI
Sequence:
RefSeq Acc Id: XM_063274438   ⟹   XP_063130508
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81557,486,346 - 57,503,680 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001013205 (Get FASTA)   NCBI Sequence Viewer  
  XP_008769095 (Get FASTA)   NCBI Sequence Viewer  
  XP_063130508 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH87106 (Get FASTA)   NCBI Sequence Viewer  
  EDM02298 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000097957
  ENSRNOP00000097957.1
GenBank Protein Q5PQM9 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001013205   ⟸   NM_001013187
- UniProtKB: Q5PQM9 (UniProtKB/Swiss-Prot),   F1LR53 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008769095   ⟸   XM_008770873
- Peptide Label: isoform X1
- UniProtKB: Q5PQM9 (UniProtKB/Swiss-Prot),   F1LR53 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000001389   ⟸   ENSRNOT00000001389
Ensembl Acc Id: ENSRNOP00000097957   ⟸   ENSRNOT00000104191
RefSeq Acc Id: XP_063130508   ⟸   XM_063274438
- Peptide Label: isoform X1
- UniProtKB: Q5PQM9 (UniProtKB/Swiss-Prot),   F1LR53 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5PQM9-F1-model_v2 AlphaFold Q5PQM9 1-291 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699834
Promoter ID:EPDNEW_R10357
Type:initiation region
Name:Slc25a30_1
Description:solute carrier family 25, member 30
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01557,834,192 - 57,834,252EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1359702 AgrOrtholog
BioCyc Gene G2FUF-13115 BioCyc
Ensembl Genes ENSRNOG00000001052 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000104191 ENTREZGENE
  ENSRNOT00000104191.1 UniProtKB/Swiss-Prot
Gene3D-CATH 1.50.40.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7193157 IMAGE-MGC_LOAD
InterPro Mit_carrier UniProtKB/Swiss-Prot
  Mito_Metabolite_Transporter UniProtKB/Swiss-Prot
  Mitochondrial_sb/sol_carrier UniProtKB/Swiss-Prot
  Mt_carrier_dom_sf UniProtKB/Swiss-Prot
KEGG Report rno:361074 UniProtKB/Swiss-Prot
MGC_CLONE MGC:94707 IMAGE-MGC_LOAD
NCBI Gene 361074 ENTREZGENE
PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED UniProtKB/Swiss-Prot
Pfam Mito_carr UniProtKB/Swiss-Prot
PhenoGen Slc25a30 PhenoGen
PRINTS MITOCARRIER UniProtKB/Swiss-Prot
PROSITE SOLCAR UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000001052 RatGTEx
Superfamily-SCOP SSF103506 UniProtKB/Swiss-Prot
UniProt A6HTT5_RAT UniProtKB/TrEMBL
  F1LR53 ENTREZGENE, UniProtKB/TrEMBL
  KMCP1_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-07-29 Slc25a30  solute carrier family 25, member 30      Symbol and Name status set to provisional 70820 PROVISIONAL