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Gene: Rnf113a1 (ring finger protein 113A1) Rattus norvegicus
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Symbol: Rnf113a1
Name: ring finger protein 113A1
Description: Predicted to have ubiquitin-protein transferase activity. Predicted to be involved in RNA splicing; isopeptide cross-linking via N6-glycyl-L-lysine; and negative regulation of chemokine-mediated signaling pathway. Predicted to localize to the U2-type precatalytic spliceosome and nucleoplasm. Orthologous to human RNF113A (ring finger protein 113A); INTERACTS WITH bisphenol A; cobalt dichloride; methamphetamine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC313450; RING finger protein 113A; similar to RIKEN cDNA 2810428C21; zinc finger protein 183
Orthologs:
Homo sapiens (human) : RNF113A (ring finger protein 113A)  HGNC  Alliance
Mus musculus (house mouse) : Rnf113a1 (ring finger protein 113A1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rnf113a (ring finger protein 113A)
Pan paniscus (bonobo/pygmy chimpanzee) : RNF113A (ring finger protein 113A)
Canis lupus familiaris (dog) : RNF113A (ring finger protein 113A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rnf113a (ring finger protein 113A)
Sus scrofa (pig) : RNF113A (ring finger protein 113A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X123,806,922 - 123,808,049 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX124,516,949 - 124,518,077 (+)Ensembl
Rnor_5.0X124,602,718 - 124,603,845 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X7,725,172 - 7,726,299 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X7,730,730 - 7,731,855 (-)NCBI
CeleraX115,655,511 - 115,656,638 (+)NCBICelera
Cytogenetic MapXq35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rnf113a1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359693
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.