IgG-2a (gamma-2a immunoglobulin heavy chain) - Rat Genome Database

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Gene: IgG-2a (gamma-2a immunoglobulin heavy chain) Rattus norvegicus
Analyze
No known orthologs.
Symbol: IgG-2a
Name: gamma-2a immunoglobulin heavy chain
RGD ID: 1359626
Description: ASSOCIATED WITH acute kidney failure; Drug-Related Side Effects and Adverse Reactions; Hepatomegaly; INTERACTS WITH 1,1-dichloroethene; 17beta-estradiol; 3H-1,2-dithiole-3-thione
Type: protein-coding
Also known as: Ig gamma-2a-chain; immunoglobulin gamma-2a chain; MGC109083; MGC109134; MGC94466
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
RGSC_v3.46138,346,448 - 138,452,787 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.16138,352,639 - 139,081,445 (-)NCBI
Cytogenetic Map6q32NCBI


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Additional References at PubMed
PMID:3016742   PMID:12477932   PMID:22206666  


Genomics

Position Markers
RH134365  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26132,516,827 - 132,517,030 (+)MAPPERmRatBN7.2
Rnor_6.06138,239,343 - 138,239,545NCBIRnor6.0
Rnor_5.06147,231,799 - 147,232,001UniSTSRnor5.0
RGSC_v3.46138,442,358 - 138,442,560UniSTSRGSC3.4
Celera6130,043,266 - 130,043,468UniSTS
RH 3.4 Map8676.3UniSTS
Cytogenetic Map6q32UniSTS
Cytogenetic Map6q33UniSTS
RH127725  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26132,464,825 - 132,465,019 (+)MAPPERmRatBN7.2
mRatBN7.2647,904,641 - 47,904,835 (+)MAPPERmRatBN7.2
Rnor_6.0650,598,166 - 50,598,359NCBIRnor6.0
Rnor_6.06138,190,294 - 138,190,487NCBIRnor6.0
Rnor_5.0659,273,393 - 59,273,586UniSTSRnor5.0
Rnor_5.06147,182,750 - 147,182,943UniSTSRnor5.0
RGSC_v3.4649,185,154 - 49,185,347UniSTSRGSC3.4
RGSC_v3.46138,387,490 - 138,387,683UniSTSRGSC3.4
Celera647,106,650 - 47,106,843UniSTS
RH 3.4 Map6284.7UniSTS
Cytogenetic Map6q32UniSTS
Cytogenetic Map6q16UniSTS
AI326478  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26132,516,866 - 132,516,948 (+)MAPPERmRatBN7.2
Rnor_6.06138,239,382 - 138,239,463NCBIRnor6.0
Rnor_5.06147,231,838 - 147,231,919UniSTSRnor5.0
RGSC_v3.46138,442,397 - 138,442,478UniSTSRGSC3.4
Celera6130,043,305 - 130,043,386UniSTS
Cytogenetic Map6q32UniSTS
Cytogenetic Map6q33UniSTS
M-04725  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26132,526,630 - 132,526,738 (+)MAPPERmRatBN7.2
Rnor_6.06138,249,146 - 138,249,253NCBIRnor6.0
Rnor_5.06147,241,602 - 147,241,709UniSTSRnor5.0
RGSC_v3.46138,452,161 - 138,452,268UniSTSRGSC3.4
Celera6130,052,813 - 130,052,920UniSTS
Cytogenetic Map6q32UniSTS
Cytogenetic Map6q33UniSTS
AA848883  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26132,424,751 - 132,424,917 (+)MAPPERmRatBN7.2
Rnor_6.06138,146,938 - 138,147,103NCBIRnor6.0
Rnor_5.06147,140,241 - 147,140,406UniSTSRnor5.0
RGSC_v3.46138,346,498 - 138,346,663UniSTSRGSC3.4
Celera6129,955,297 - 129,955,462UniSTS
RH 3.4 Map6781.2UniSTS
Cytogenetic Map6q32UniSTS


Expression


Sequence


Protein Domains
Ig-like


Additional Information

Database Acc Id Source(s)
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7123713 IMAGE-MGC_LOAD
  IMAGE:7365825 IMAGE-MGC_LOAD
  IMAGE:7375893 IMAGE-MGC_LOAD
  IMAGE:7382505 IMAGE-MGC_LOAD
InterPro Ig-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_C1-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
  Ig_V-set UniProtKB/TrEMBL
MGC_CLONE MGC:109023 IMAGE-MGC_LOAD
  MGC:109083 IMAGE-MGC_LOAD
  MGC:109134 IMAGE-MGC_LOAD
  MGC:95049 IMAGE-MGC_LOAD
NCBI Gene 367586 ENTREZGENE
Pfam C1-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  V-set UniProtKB/TrEMBL
PhenoGen IgG-2a PhenoGen
PROSITE IG_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART IGc1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IGv UniProtKB/TrEMBL
  SM00409 UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt IGG2A_RAT UniProtKB/Swiss-Prot
  Q5M842_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-07-29 IgG-2a  gamma-2a immunoglobulin heavy chain      Symbol and Name status set to provisional 70820 PROVISIONAL