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Gene: Spata1 (spermatogenesis associated 1) Rattus norvegicus
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Symbol: Spata1
Name: spermatogenesis associated 1
RGD ID: 1359500
Description: Orthologous to human SPATA1 (spermatogenesis associated 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; decabromodiphenyl ether.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC362056; similar to RIKEN cDNA 4921536I21; spermatogenesis-associated protein 1
Orthologs:
Homo sapiens (human) : SPATA1 (spermatogenesis associated 1)  HGNC  Alliance
Mus musculus (house mouse) : Spata1 (spermatogenesis associated 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Spata1 (spermatogenesis associated 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SPATA1 (spermatogenesis associated 1)
Canis lupus familiaris (dog) : SPATA1 (spermatogenesis associated 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Spata1 (spermatogenesis associated 1)
Sus scrofa (pig) : SPATA1 (spermatogenesis associated 1)
Chlorocebus sabaeus (African green monkey) : SPATA1 (spermatogenesis associated 1)
Heterocephalus glaber (naked mole-rat) : Spata1 (spermatogenesis associated 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02252,313,293 - 252,359,798 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2252,314,426 - 252,359,798 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02270,841,390 - 270,886,775 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42244,656,916 - 244,702,698 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12244,643,656 - 244,689,438 (-)NCBI
Celera2227,328,853 - 227,374,213 (-)NCBICelera
Cytogenetic Map2q44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Spata1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359500
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.