Map3k7cl (MAP3K7 C-terminal like)

Gene: Map3k7cl (MAP3K7 C-terminal like) Rattus norvegicus

Analyze

Symbol:

Map3k7cl

Name:

MAP3K7 C-terminal like

RGD ID:

1359474

Description:

Orthologous to human MAP3K7CL (MAP3K7 C-terminal like); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acetamide; atrazine.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

hypothetical protein LOC304131; LOC304131; similar to C21ORF7; TAK1-like protein

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MAP3K7CL (MAP3K7 C-terminal like)	HGNC	EggNOG, Ensembl, OMA, OrthoMCL, PhylomeDB, Treefam
Mus musculus (house mouse):	Map3k7cl (Map3k7 C-terminal like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Map3k7cl (MAP3K7 C-terminal like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MAP3K7CL (MAP3K7 C-terminal like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MAP3K7CL (MAP3K7 C-terminal like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Map3k7cl (MAP3K7 C-terminal like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MAP3K7CL (MAP3K7 C-terminal like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MAP3K7CL (MAP3K7 C-terminal like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Map3k7cl (MAP3K7 C-terminal like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	CADM2 (cell adhesion molecule 2)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	MAP3K7CL (MAP3K7 C-terminal like)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Map3k7cl (Map3k7 C-terminal like)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	map3k7cl (map3k7 C-terminal like)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	map3k7cl	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	40,276,839 - 40,321,848 (+)	NCBI		GRCr8
mRatBN7.2	11	26,791,044 - 26,835,605 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	26,791,316 - 26,835,602 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	35,489,376 - 35,533,749 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	28,189,634 - 28,234,011 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	27,378,551 - 27,422,901 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	27,208,177 - 27,251,802 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	27,208,564 - 27,251,801 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	30,833,713 - 30,877,235 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	27,316,515 - 27,360,823 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	27,316,514 - 27,360,820 (+)	NCBI
Celera	11	26,536,949 - 26,579,484 (+)	NCBI		Celera
Cytogenetic Map	11	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-sulfonyldiphenol (ISO)

acetamide (EXP)

acrolein (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

alpha-pinene (ISO)

amphibole asbestos (ISO)

aristolochic acid A (ISO)

arsenous acid (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

chromium(6+) (ISO)

copper(II) sulfate (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

diallyl trisulfide (ISO)

diarsenic trioxide (ISO)

dichloroacetic acid (ISO)

doxorubicin (ISO)

endosulfan (EXP)

fulvestrant (ISO)

methapyrilene (ISO)

nickel sulfate (ISO)

O-methyleugenol (ISO)

ozone (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

progesterone (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

temozolomide (ISO)

trichloroethene (EXP)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

cytosol (IEA)

nucleus (IEA)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
2.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:16780588

Genomics

Comparative Map Data

Map3k7cl
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	40,276,839 - 40,321,848 (+)	NCBI		GRCr8
mRatBN7.2	11	26,791,044 - 26,835,605 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	26,791,316 - 26,835,602 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	35,489,376 - 35,533,749 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	28,189,634 - 28,234,011 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	27,378,551 - 27,422,901 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	27,208,177 - 27,251,802 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	27,208,564 - 27,251,801 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	30,833,713 - 30,877,235 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	27,316,515 - 27,360,823 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	27,316,514 - 27,360,820 (+)	NCBI
Celera	11	26,536,949 - 26,579,484 (+)	NCBI		Celera
Cytogenetic Map	11	q11	NCBI

MAP3K7CL
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	21	29,077,114 - 29,175,887 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	21	29,077,221 - 29,175,889 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	21	30,449,435 - 30,548,208 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	21	29,374,744 - 29,470,075 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	21	29,374,743 - 29,470,071	NCBI
Celera	21	15,636,331 - 15,731,645 (+)	NCBI		Celera
Cytogenetic Map	21	q21.3	NCBI
HuRef	21	15,859,086 - 15,957,030 (+)	NCBI		HuRef
CHM1_1	21	30,015,215 - 30,110,541 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	21	27,440,554 - 27,542,501 (+)	NCBI		T2T-CHM13v2.0

Map3k7cl
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	87,350,208 - 87,392,224 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	87,350,218 - 87,392,224 (+)	Ensembl		GRCm39 Ensembl
GRCm38	16	87,553,330 - 87,595,336 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	87,553,330 - 87,595,336 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	87,553,575 - 87,595,581 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	87,442,526 - 87,484,529 (+)	NCBI		MGSCv36	mm8
Celera	16	87,747,742 - 87,789,444 (+)	NCBI		Celera
Cytogenetic Map	16	C3.3	NCBI
cM Map	16	49.58	NCBI

Map3k7cl
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955407	28,460,198 - 28,534,898 (+)	NCBI	ChiLan1.0	ChiLan1.0

MAP3K7CL
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	22	25,268,469 - 25,363,781 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	21	20,126,882 - 20,221,565 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	21	15,507,556 - 15,612,695 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	21	28,899,594 - 29,001,155 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	21	28,907,911 - 29,001,155 (+)	Ensembl	panpan1.1		panPan2

MAP3K7CL
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	31	24,087,840 - 24,168,357 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	31	24,132,629 - 24,167,494 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	31	24,068,568 - 24,160,904 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	31	24,189,045 - 24,281,429 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	31	24,237,898 - 24,280,563 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	31	24,139,470 - 24,231,857 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	31	24,141,107 - 24,233,902 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	31	24,612,441 - 24,704,994 (+)	NCBI		UU_Cfam_GSD_1.0

Map3k7cl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404971	24,576,984 - 24,616,569 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936500	12,852,002 - 12,890,839 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936500	12,851,254 - 12,890,839 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MAP3K7CL
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	192,489,751 - 192,534,821 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	192,488,937 - 192,534,826 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	202,879,052 - 202,894,743 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MAP3K7CL
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	63,047,557 - 63,092,118 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	63,047,562 - 63,091,829 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666071	5,632,779 - 5,677,184 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Map3k7cl
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624745	17,114,492 - 17,156,839 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Map3k7cl
289 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	90
Count of miRNA genes:	73
Interacting mature miRNAs:	84
Transcripts:	ENSRNOT00000002158
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1598842	Glom10	Glomerulus QTL 10	3.4		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	11	1	35331169	Rat
1300147	Bp187	Blood pressure QTL 187	3.67		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	11	1	69446234	Rat
1558659	Tescar1	Testicular tumor resistance QTL 1	3.9		testis integrity trait (VT:0010572)	percentage of study population developing testis tumors during a period of time (CMO:0001261)	11	1041931	66113562	Rat
1641927	Alcrsp10	Alcohol response QTL 10			alcohol metabolism trait (VT:0015089)	blood ethanol level (CMO:0000535)	11	8436674	53436674	Rat
724517	Uae18	Urinary albumin excretion QTL 18	3.7		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	11	16472047	44285911	Rat
724554	Iddm17	Insulin dependent diabetes mellitus QTL 17		0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	11	18976208	86241447	Rat
10058952	Gmadr6	Adrenal mass QTL 6	2.29	0.0072	adrenal gland mass (VT:0010420)	both adrenal glands wet weight to body weight ratio (CMO:0002411)	11	22959403	67959403	Rat
8694376	Bw156	Body weight QTL 156	2.25	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	23280456	68280456	Rat
9590313	Scort20	Serum corticosterone level QTL 20	6.51	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	11	23280456	68280456	Rat
9589032	Epfw10	Epididymal fat weight QTL 10	9.29	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	11	23280456	68280456	Rat
8694424	Bw162	Body weight QTL 162	3.8	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	23280456	68280456	Rat

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium							4	7		11	3		4
Low	3	33	32	16	19	16	4	4	66	24	36	11	4
Below cutoff		10	21	21		21			8		2

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001013979	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006248016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088440	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC076389	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000002158 ⟹ ENSRNOP00000002158

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	11	26,791,338 - 26,835,597 (+)	Ensembl
Rnor_6.0 Ensembl	11	27,208,564 - 27,251,794 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000084580 ⟹ ENSRNOP00000075139

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	11	26,791,316 - 26,835,602 (+)	Ensembl
Rnor_6.0 Ensembl	11	27,210,593 - 27,251,801 (+)	Ensembl

RefSeq Acc Id:

NM_001013979 ⟹ NP_001014001

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	40,277,581 - 40,321,843 (+)	NCBI
mRatBN7.2	11	26,791,338 - 26,835,600 (+)	NCBI
Rnor_6.0	11	27,208,564 - 27,251,797 (+)	NCBI
Rnor_5.0	11	30,833,713 - 30,877,235 (+)	NCBI
RGSC_v3.4	11	27,316,515 - 27,360,823 (+)	RGD
Celera	11	26,536,949 - 26,579,484 (+)	RGD

Sequence:

show sequence

GAGAGAGGCTATGCGAGGAAGCGGAACAGGGAGGTCCCGTGGGATGGGACGCTGGGGTCCGGGG
CAGAGCAGGTAGTGTGCCTGCTGGGCAGCTGTCTCTGCTCCTCAGAGTGTCCGTGGCTGTTATG
CAGCAGGTGCAGACTGCTCTCTCGCTGAGTCTTGACTCCACAAACCCAACGACTGGCCAAGGCA
GTGGCTGGCCCTGGATTACACAAGCGCAGACTCTCAACTAAGTGAGCTGGAAGACCCAGGAGAA
GGCCGGGCCTCAGGTGCCCACATGATCAGCACAGCCAGGGTACCTGCAGATAAGCCAGTACGCA
TCGCGTTTAGCCTCAATGATGCCCCAGATGATACACCGTCTGAAGAGGCCACTCCTTTGGTCTT
CCCAGAGTTAGAGCAACAGCTCCAGCCTTTGCCACCTTGTCACGACTCAGCAGAATCCATGCAG
GTGTTTAAACAGCACTGCCAAATAGCGGAAGAGTACCATGAAGTCAAAAAGGAGATCGCCTTGC
TTGAGGAAAGGAAGAAGGAGCTCATTGCCAAGCTGGACCAGGCAGAGAAGGAGAAGCTGGATGC
TGCTCAGCTGGTGAGGGAGTTTGAGGCCCTGACGGAGGAGAACCGGACGCTGAAGATGGCCCAG
TCTCAGTGTGTAGAGCAACTGGAAAAACTCAGAATCCAGTATCAGAAGAGGCAGGGCTCCTCCT
AACATCAGCCGATGAAATGTGAGCGAGGTTGCTGACTGCCATGTGCTGGCCAAAAGGATTTGCA
TCTTAAGGAACAGAGAGTAAAATCTATTGCTTCCCTTTATTACCCACATGGCAAATGTCTAGAG
TGAGTTTAGTGCCGCCTAGCTTCTAGCTCGAGAGGGGGATATTTTAAGCGAGGTCATTAATGCA
AAGCTATCGCCAGTATATATTTTCAGAGATCAAGAGTTCTTTTTTCCAAATATATACGTATATA
TATATATATCTTAGAAAGATATGATCATACTGTACATTATAGTAGAAAATAATAAAAATAGAAT
ATCGACTGGCCCCACCGAAAGTCATGCGCCATAAAACAAGCCAGTAGGGTGTTCACTGTAGTTT
CACATCTGTGCATCTAAAAATTCTATGCCTTTTCATATTGCAAGTCTGCTCAGCTACAAACCAT
GAAAACTAGCTGTGCTCGGTAGAGTCAGATGTAACTCTTCAGTGACTGACTGTCCTAAGAACAA
ATGGTTGTATAGCCTAAATGCTTTCTCGTGAAACTATCAGCAGTCGTGCGTCCTTGCCCAAAGC
TCACTGGCCAGCGCTGATTTGTGTAAGGAAGAATCAAGGCTGACCGTGCTTTCTTCCCTCTGGG
TTAACACGCAGTGGACACGTTTGCGTTGGCGGTGTGGGTCTTTGGGGTCTGGGCCCGGGGAAAG
TGGAAGCTATGGTTCAGACCCCACACACCATTGAGTGTCTGTAAGACCGGTGAGAGGATATAAC
TAGTGCTCGGGATCTCAGGAGATAGGTTAGACCAGTGAGGCTGACGGGAATGTGGCGCGAATGC
AGAATTAGAGAGCACGATCTCCCTTGGTTCCGGCTCCCACATCTTCCGCCGCCCATCTTTGTTT
TGTGTCTGTTTCCAGTCACGTGACTCCTTTTTCATTAAACGTGGATCCAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006248016 ⟹ XP_006248078

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	40,276,839 - 40,321,848 (+)	NCBI
mRatBN7.2	11	26,791,166 - 26,835,605 (+)	NCBI
Rnor_6.0	11	27,208,177 - 27,251,802 (+)	NCBI
Rnor_5.0	11	30,833,713 - 30,877,235 (+)	NCBI

Sequence:

show sequence

AAATGGATCGAGTCACCAAGCTCAAGTCCGGCTCAACCTCAAACCTCACCTTCTTAATGGGATC
ATCGCTGCCACGATCCAAGACTCAGCCAGTGGCCTGTCCAAGTTGGCTGGCTTTAGCTGAGCTG
ACATTTTTGCTGACTAGAGTCATGCTATCTTTGCCAGTTCGCTGGAATAGACACAGACACGGAT
TGGGTCACCACGAAGACATTCCTGTCTTGTGAAGCAAGTCTGTTTGTATTTTAGGTTTGCCAGG
ACTAATGAATTAAAACATTTGGACGCTCTACAACTTGCTGTTTATCAATGCTTCTGACAGGAGG
GGGGTTTTTCTTTTGCTCTTGCTTTTTCTAGAAACATGACAACATCCTGGCTGTGGCAAGGAAA
GGAGAGAGAGGCTATGCGAGGAAGCGGAACAGGGAGGTCCCGTGGGATGGGACGCTGGGGTCCG
GGGCAGAGCAGGTAGTGTGCCTGCTGGGCAGCTGTCTCTGCTCCTCAGAGTGTCCGTGGCTGTT
ATGCAGCAGGTGCAGACTGCTCTCTCGCTGAGTCTTGACTCCACAAACCCAACGACTGGCCAAG
GCAGTGGCTGGCCCTGGATTACACAAGCGCAGACTCTCAACTAAGTGAGGAGAGTTGATCTCAG
ATCCTCCTGCTTGGATGGCAAGCATTTGACCAGCTGGGCTCTCTCCCTAGCCCCTAAGCATGGA
AAACAGCATAGCCTGAAGCCATCTGACAGTCTATTGAATGGTTGTCCCCAATTAAAATTGGTAG
ATGACCCTCAAAACCAAGATTCAGCCGATCAATGGAGAGCAATATCGAAAATAGGAAGTAGGAG
TTTTAAAACCATATTTCATTCATTCTGGATGTCTATTACCAAAGAAAAAAATTTTTTTGTAGAA
GAGAGAAAAAAATTAAAATGGACCAGCTGGAAGACCCAGGAGAAGGCCGGGCCTCAGGTGCCCA
CATGATCAGCACAGCCAGGGTACCTGCAGATAAGCCAGTACGCATCGCGTTTAGCCTCAATGAT
GCCCCAGATGATACACCGTCTGAAGAGGCCACTCCTTTGGTCTTCCCAGAGTTAGAGCAACAGC
TCCAGCCTTTGCCACCTTGTCACGACTCAGCAGAATCCATGCAGGTGTTTAAACAGCACTGCCA
AATAGCGGAAGAGTACCATGAAGTCAAAAAGGAGATCGCCTTGCTTGAGGAAAGGAAGAAGGAG
CTCATTGCCAAGCTGGACCAGGCAGAGAAGGAGAAGCTGGATGCTGCTCAGCTGGTGAGGGAGT
TTGAGGCCCTGACGGAGGAGAACCGGACGCTGAAGATGGCCCAGTCTCAGTGTGTAGAGCAACT
GGAAAAACTCAGAATCCAGTATCAGAAGAGGCAGGGCTCCTCCTAACATCAGCCGATGAAATGT
GAGCGAGGTTGCTGACTGCCATGTGCTGGCCAAAAGGATTTGCATCTTAAGGAACAGAGAGTAA
AATCTATTGCTTCCCTTTATTACCCACATGGCAAATGTCTAGAGTGAGTTTAGTGCCGCCTAGC
TTCTAGCTCGAGAGGGGGATATTTTAAGCGAGGTCATTAATGCAAAGCTATCGCCAGTATATAT
TTTCAGAGATCAAGAGTTCTTTTTTCCAAATATATACGTATATATATATATATCTTAGAAAGAT
ATGATCATACTGTACATTATAGTAGAAAATAATAAAAATAGAATATCGACTGGCCCCACCGAAA
GTCATGCGCCATAAAACAAGCCAGTAGGGTGTTCACTGTAGTTTCACATCTGTGCATCTAAAAA
TTCTATGCCTTTTCATATTGCAAGTCTGCTCAGCTACAAACCATGAAAACTAGCTGTGCTCGGT
AGAGTCAGATGTAACTCTTCAGTGACTGACTGTCCTAAGAACAAATGGTTGTATAGCCTAAATG
CTTTCTCGTGAAACTATCAGCAGTCGTGCGTCCTTGCCCAAAGCTCACTGGCCAGCGCTGATTT
GTGTAAGGAAGAATCAAGGCTGACCGTGCTTTCTTCCCTCTGGGTTAACACGCAGTGGACACGT
TTGCGTTGGCGGTGTGGGTCTTTGGGGTCTGGGCCCGGGGAAAGTGGAAGCTATGGTTCAGACC
CCACACACCATTGAGTGTCTGTAAGACCGGTGAGAGGATATAACTAGTGCTCGGGATCTCAGGA
GATAGGTTAGACCAGTGAGGCTGACGGGAATGTGGCGCGAATGCAGAATTAGAGAGCACGATCT
CCCTTGGTTCCGGCTCCCACATCTTCCGCCGCCCATCTTTGTTTTGTGTCTGTTTCCAGTCACG
TGACTCCTTTTTCATTAAACGTGGATCCAAAGTGCG

hide sequence

RefSeq Acc Id:

XM_039088440 ⟹ XP_038944368

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	40,276,839 - 40,321,848 (+)	NCBI
mRatBN7.2	11	26,791,044 - 26,835,605 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001014001	(Get FASTA)	NCBI Sequence Viewer
	XP_006248078	(Get FASTA)	NCBI Sequence Viewer
	XP_038944368	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH76389	(Get FASTA)	NCBI Sequence Viewer
	EDM10644	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000002158
	ENSRNOP00000002158.4
	ENSRNOP00000075139
	ENSRNOP00000075139.1

RefSeq Acc Id:	NP_001014001 ⟸ NM_001013979
- UniProtKB:	Q6DGF7 (UniProtKB/TrEMBL), F7FAX9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MISTARVPADKPVRIAFSLNDAPDDTPSEEATPLVFPELEQQLQPLPPCHDSAESMQVFKQHCQ IAEEYHEVKKEIALLEERKKELIAKLDQAEKEKLDAAQLVREFEALTEENRTLKMAQSQCVEQL EKLRIQYQKRQGSS hide sequence

RefSeq Acc Id:	XP_006248078 ⟸ XM_006248016
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K9U9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDQLEDPGEGRASGAHMISTARVPADKPVRIAFSLNDAPDDTPSEEATPLVFPELEQQLQPLPP CHDSAESMQVFKQHCQIAEEYHEVKKEIALLEERKKELIAKLDQAEKEKLDAAQLVREFEALTE ENRTLKMAQSQCVEQLEKLRIQYQKRQGSS hide sequence

RefSeq Acc Id:

ENSRNOP00000075139 ⟸ ENSRNOT00000084580

RefSeq Acc Id:

ENSRNOP00000002158 ⟸ ENSRNOT00000002158

RefSeq Acc Id:	XP_038944368 ⟸ XM_039088440
- Peptide Label:	isoform X2

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K9U9-F1-model_v2	AlphaFold	A0A0G2K9U9	1-158	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13698025

Promoter ID:

EPDNEW_R8549

Type:

initiation region

Name:

Map3k7cl_1

Description:

MAP3K7 C-terminal like

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	11	27,208,540 - 27,208,600	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1359474	AgrOrtholog
BioCyc Gene	G2FUF-22046	BioCyc
Ensembl Genes	ENSRNOG00000001584	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000002158	ENTREZGENE
	ENSRNOT00000002158.7	UniProtKB/TrEMBL
	ENSRNOT00000084580.2	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7110014	IMAGE-MGC_LOAD
InterPro	Map3k7cl	UniProtKB/TrEMBL
KEGG Report	rno:304131	UniProtKB/TrEMBL
MGC_CLONE	MGC:93801	IMAGE-MGC_LOAD
NCBI Gene	304131	ENTREZGENE
PANTHER	MAP3K7 C-TERMINAL-LIKE PROTEIN	UniProtKB/TrEMBL
	PTHR47140	UniProtKB/TrEMBL
PhenoGen	Map3k7cl	PhenoGen
RatGTEx	ENSRNOG00000001584	RatGTEx
UniProt	A0A0G2K9U9	ENTREZGENE, UniProtKB/TrEMBL
	F7FAX9	ENTREZGENE, UniProtKB/TrEMBL
	Q6DGF7	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2014-02-04	Map3k7cl	MAP3K7 C-terminal like	LOC304131	similar to C21ORF7	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-07-29	LOC304131	similar to C21ORF7			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar