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Gene: Cxxc5 (CXXC finger protein 5) Rattus norvegicus
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Symbol: Cxxc5
Name: CXXC finger protein 5
Description: Predicted to have methyl-CpG binding activity; transcription factor binding activity; and zinc ion binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to localize to cytosol and nucleoplasm. Orthologous to human CXXC5 (CXXC finger protein 5); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 3H-1,2-dithiole-3-thione.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: CXXC finger 5; CXXC-type zinc finger protein 5; MGC94398
Orthologs:
Homo sapiens (human) : CXXC5 (CXXC finger protein 5)  HGNC  Alliance
Mus musculus (house mouse) : Cxxc5 (CXXC finger 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cxxc5 (CXXC finger protein 5)
Pan paniscus (bonobo/pygmy chimpanzee) : CXXC5 (CXXC finger protein 5)
Canis lupus familiaris (dog) : CXXC5 (CXXC finger protein 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cxxc5 (CXXC finger protein 5)
Sus scrofa (pig) : CXXC5 (CXXC finger protein 5)
Chlorocebus sabaeus (African green monkey) : CXXC5 (CXXC finger protein 5)
Heterocephalus glaber (naked mole-rat) : Cxxc5 (CXXC finger protein 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01828,626,386 - 28,656,916 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1828,653,592 - 28,656,937 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01828,337,800 - 28,368,326 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41828,484,230 - 28,487,485 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11828,510,875 - 28,514,133 (+)NCBI
Celera1827,186,377 - 27,189,632 (+)NCBICelera
Cytogenetic Map18p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cxxc5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359466
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.