Cellular Component Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | endoplasmic reticulum | located_in | IEA | UniProtKB-SubCell:SL-0095 | 1600115 | GO_REF:0000044 | UniProt | GO_REF:0000044 | |
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Cellular Component Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | endoplasmic reticulum | located_in | IEA | UniProtKB-SubCell:SL-0095 | 1600115 | GO_REF:0000044 | UniProt | GO_REF:0000044 | |
# | Reference Title | Reference Citation |
1. | OMIM Disease Annotation Pipeline | OMIM Disease Annotation Pipeline |
2. | KEGG Annotation Import Pipeline | Pipeline to import KEGG annotations from KEGG into RGD |
3. | GOA pipeline | RGD automated data pipeline |
4. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
5. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
6. | Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. | Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11. |
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Variants in Alg13l1
28 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
RH132347 |
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RH142021 |
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alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
High | |||||||||||||
Medium | 4 | 10 | 4 | 6 | 4 | 63 | 14 | 34 | |||||
Low | 3 | 39 | 47 | 37 | 13 | 37 | 8 | 11 | 11 | 21 | 7 | 11 | 8 |
Below cutoff |
RefSeq Acc Id: | ENSRNOT00000007968 ⟹ ENSRNOP00000007969 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000075912 ⟹ ENSRNOP00000068280 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000076521 ⟹ ENSRNOP00000068197 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000076680 ⟹ ENSRNOP00000068463 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000077034 ⟹ ENSRNOP00000067947 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000087859 ⟹ ENSRNOP00000073949 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_001013951 ⟹ NP_001013973 | ||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017601953 ⟹ XP_017457442 | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_063279883 ⟹ XP_063135953 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NP_001013973 ⟸ NM_001013951 |
- UniProtKB: | Q5I0K7 (UniProtKB/Swiss-Prot), A6KG91 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_017457442 ⟸ XM_017601953 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A096MJN3 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSRNOP00000067947 ⟸ ENSRNOT00000077034 |
RefSeq Acc Id: | ENSRNOP00000073949 ⟸ ENSRNOT00000087859 |
RefSeq Acc Id: | ENSRNOP00000068280 ⟸ ENSRNOT00000075912 |
RefSeq Acc Id: | ENSRNOP00000007969 ⟸ ENSRNOT00000007968 |
RefSeq Acc Id: | ENSRNOP00000068463 ⟸ ENSRNOT00000076680 |
RefSeq Acc Id: | ENSRNOP00000068197 ⟸ ENSRNOT00000076521 |
RefSeq Acc Id: | XP_063135953 ⟸ XM_063279883 |
- Peptide Label: | isoform X2 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q5I0K7-F1-model_v2 | AlphaFold | Q5I0K7 | 1-165 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13701970 | ||||||||
Promoter ID: | EPDNEW_R12493 | ||||||||
Type: | multiple initiation site | ||||||||
Name: | LOC108349244_1 | ||||||||
Description: | putative bifunctional UDP-N-acetylglucosamine transferase anddeubiquitinase ALG13 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:1359416 | AgrOrtholog |
BioCyc Gene | G2FUF-1488 | BioCyc |
Ensembl Genes | ENSRNOG00000005753 | Ensembl, UniProtKB/TrEMBL |
ENSRNOG00000065758 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot | |
ENSRNOG00055025531 | UniProtKB/Swiss-Prot | |
ENSRNOG00060018681 | UniProtKB/Swiss-Prot | |
ENSRNOG00065026757 | UniProtKB/Swiss-Prot | |
Ensembl Transcript | ENSRNOT00000075912.3 | UniProtKB/TrEMBL |
ENSRNOT00000076680 | ENTREZGENE | |
ENSRNOT00000076680.3 | UniProtKB/Swiss-Prot | |
ENSRNOT00055044062 | UniProtKB/Swiss-Prot | |
ENSRNOT00060032167 | UniProtKB/Swiss-Prot | |
ENSRNOT00065046144 | UniProtKB/Swiss-Prot | |
Gene3D-CATH | Glycogen Phosphorylase B | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
IMAGE_CLONE | IMAGE:7324702 | IMAGE-MGC_LOAD |
InterPro | Alg13-like | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Glyco_trans_28_C | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Tudor | UniProtKB/TrEMBL | |
KEGG Report | rno:300284 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
MGC_CLONE | MGC:109002 | IMAGE-MGC_LOAD |
NCBI Gene | 300284 | ENTREZGENE |
PANTHER | GLYCOSYL TRANSFERASE-RELATED | UniProtKB/TrEMBL |
N-ACETYLGLUCOSAMINYLDIPHOSPHODOLICHOL N-ACETYLGLUCOSAMINYLTRANSFERASE | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PTHR12867 | UniProtKB/Swiss-Prot | |
Pfam | Glyco_tran_28_C | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PhenoGen | Alg13l1 | PhenoGen |
PROSITE | TUDOR | UniProtKB/TrEMBL |
RatGTEx | ENSRNOG00000005753 | RatGTEx |
ENSRNOG00000065758 | RatGTEx | |
ENSRNOG00055025531 | RatGTEx | |
ENSRNOG00060018681 | RatGTEx | |
ENSRNOG00065026757 | RatGTEx | |
Superfamily-SCOP | Tudor/PWWP/MBT | UniProtKB/TrEMBL |
UDP-Glycosyltransferase/glycogen phosphorylase | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
UniProt | A0A096MJN3 | ENTREZGENE |
A0A096MJV8_RAT | UniProtKB/TrEMBL | |
A6KG91 | ENTREZGENE, UniProtKB/TrEMBL | |
ALG13_RAT | UniProtKB/Swiss-Prot, ENTREZGENE |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2023-08-01 | Alg13l1 | ALG13, UDP-N-acetylglucosaminyltransferase subunit like 1 | Alg13 | ALG13, UDP-N-acetylglucosaminyltransferase subunit | Name and Symbol changed | 629549 | APPROVED |
2014-09-09 | Alg13 | ALG13, UDP-N-acetylglucosaminyltransferase subunit | Alg13 | asparagine-linked glycosylation 13 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2012-07-13 | Alg13 | asparagine-linked glycosylation 13 | Alg13 | asparagine-linked glycosylation 13 homolog (S. cerevisiae) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2008-03-04 | Alg13 | asparagine-linked glycosylation 13 homolog (S. cerevisiae) | LOC300284 | similar to RIKEN cDNA 4833435D08 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2005-07-29 | LOC300284 | similar to RIKEN cDNA 4833435D08 | Symbol and Name status set to provisional | 70820 | PROVISIONAL |