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Gene: Ccdc172 (coiled-coil domain containing 172) Rattus norvegicus
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Symbol: Ccdc172
Name: coiled-coil domain containing 172
Description: Localizes to the sperm midpiece. Orthologous to human CCDC172 (coiled-coil domain containing 172); INTERACTS WITH bisphenol A; trichostatin A (ortholog); valproic acid (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: coiled-coil domain-containing protein 172; hypothetical protein LOC361776; LOC361776; TEKT2-binding protein 1; UPF0628 protein C10orf96 homolog
Orthologs:
Homo sapiens (human) : CCDC172 (coiled-coil domain containing 172)  HGNC  Alliance
Mus musculus (house mouse) : Ccdc172 (coiled-coil domain containing 172)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ccdc172 (coiled-coil domain containing 172)
Pan paniscus (bonobo/pygmy chimpanzee) : CCDC172 (coiled-coil domain containing 172)
Canis lupus familiaris (dog) : CCDC172 (coiled-coil domain containing 172)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ccdc172 (coiled-coil domain containing 172)
Sus scrofa (pig) : CCDC172 (coiled-coil domain containing 172)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01279,633,655 - 279,699,234 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01286,995,694 - 287,041,588 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41264,938,299 - 264,981,620 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11265,149,399 - 265,192,664 (+)NCBI
Celera1253,289,322 - 253,332,261 (+)NCBICelera
Cytogenetic Map1q55NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ccdc172
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359412
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.