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Gene: Amt (aminomethyltransferase) Rattus norvegicus
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Symbol: Amt
Name: aminomethyltransferase
Description: Predicted to have aminomethyltransferase activity. Predicted to be involved in glycine decarboxylation via glycine cleavage system. Predicted to localize to the mitochondrion and nucleoplasm. Human ortholog(s) of this gene implicated in glycine encephalopathy. Orthologous to human AMT (aminomethyltransferase); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate cycle metabolic pathway; INTERACTS WITH (+)-schisandrin B; 3-chloropropane-1,2-diol; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: aminomethyltransferase (glycine cleavage system protein T); aminomethyltransferase, mitochondrial; LOC306586; similar to aminomethyltransferase
Orthologs:
Homo sapiens (human) : AMT (aminomethyltransferase)  HGNC  Alliance
Mus musculus (house mouse) : Amt (aminomethyltransferase)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Amt (aminomethyltransferase)
Pan paniscus (bonobo/pygmy chimpanzee) : AMT (aminomethyltransferase)
Canis lupus familiaris (dog) : AMT (aminomethyltransferase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Amt (aminomethyltransferase)
Sus scrofa (pig) : AMT (aminomethyltransferase)
more info ...
Related Pseudogenes: LOC100362233  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08117,068,388 - 117,078,633 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8117,068,582 - 117,077,913 (+)Ensembl
Rnor_5.08116,421,237 - 116,427,437 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera8108,284,894 - 108,291,149 (+)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Amt
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359408
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.