Amt (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 8 | 117,859,700 - 117,866,692 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 108,981,620 - 108,988,127 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 108,976,472 - 108,988,126 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 8 | 114,609,027 - 114,615,287 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 8 | 112,808,351 - 112,814,611 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 8 | 110,650,990 - 110,657,250 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 8 | 117,068,388 - 117,078,633 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 117,068,582 - 117,077,913 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 116,421,237 - 116,427,437 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Celera | 8 | 108,284,894 - 108,291,149 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | q32 | NCBI | | | | |
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AMT (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 3 | 49,416,778 - 49,422,473 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 49,416,778 - 49,422,685 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 49,454,211 - 49,459,906 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 49,429,215 - 49,435,016 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 49,429,215 - 49,435,016 | NCBI | | | | | Celera | 3 | 49,418,998 - 49,424,898 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | p21.31 | NCBI | | | | | HuRef | 3 | 49,513,933 - 49,519,839 (-) | NCBI | | HuRef | | | CHM1_1 | 3 | 49,406,978 - 49,412,879 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 49,446,157 - 49,451,857 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Amt (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 9 | 108,174,104 - 108,179,501 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 108,174,052 - 108,179,501 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 108,296,905 - 108,302,302 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 108,296,853 - 108,302,302 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 108,199,253 - 108,203,928 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 108,155,015 - 108,159,690 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 107,905,964 - 107,910,640 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | F2 | NCBI | | | | | cM Map | 9 | 59.19 | NCBI | | | | |
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Amt (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955532 | 1,351,743 - 1,358,220 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955532 | 1,351,743 - 1,358,220 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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AMT (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 49,398,956 - 49,404,963 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 49,403,728 - 49,409,743 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 49,344,590 - 49,350,383 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 50,589,193 - 50,594,968 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 50,589,193 - 50,594,968 (-) | Ensembl | panpan1.1 | | panPan2 | |
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AMT (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 20 | 39,815,449 - 39,820,907 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 20 | 39,815,814 - 39,820,506 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 20 | 39,734,265 - 39,738,979 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 20 | 40,171,089 - 40,177,135 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 20 | 40,166,889 - 40,177,126 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 20 | 39,539,587 - 39,544,295 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 20 | 39,943,207 - 39,947,921 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 20 | 40,222,791 - 40,227,505 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Amt (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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AMT (Sus scrofa - pig) |
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AMT (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 22 | 10,813,601 - 10,820,628 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 22 | 10,814,358 - 10,819,632 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 156,193,769 - 156,201,669 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Amt (Heterocephalus glaber - naked mole-rat) |
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