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Gene: Pacc1 (proton activated chloride channel 1) Rattus norvegicus
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Symbol: Pacc1
Name: proton activated chloride channel 1
Description: Predicted to have pH-gated chloride channel activity. Predicted to be involved in chloride transport. Predicted to localize to the integral component of plasma membrane. Orthologous to human PACC1 (proton activated chloride channel 1); INTERACTS WITH bisphenol A; furan; phenylephrine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC95217; PAC; proton-activated chloride channel; RGD1359339; similar to RIKEN cDNA 2310028N02; Tmem206; transmembrane protein 206
Orthologs:
Homo sapiens (human) : PACC1 (proton activated chloride channel 1)  HGNC  Alliance
Mus musculus (house mouse) : Pacc1 (proton activated chloride channel 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pacc1 (proton activated chloride channel 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PACC1 (proton activated chloride channel 1)
Canis lupus familiaris (dog) : PACC1 (proton activated chloride channel 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pacc1 (proton activated chloride channel 1)
Sus scrofa (pig) : PACC1 (proton activated chloride channel 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.013110,006,975 - 110,032,790 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl13110,007,010 - 110,031,895 (+)Ensembl
Rnor_5.013114,572,868 - 114,597,637 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.413107,387,221 - 107,412,108 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.113107,576,324 - 107,601,210 (+)NCBI
Celera13102,343,772 - 102,368,659 (+)NCBICelera
Cytogenetic Map13q27NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pacc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359339
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.