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Gene: Xkr5 (XK related 5) Rattus norvegicus
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Symbol: Xkr5
Name: XK related 5
RGD ID: 1359335
Description: Predicted to be involved in apoptotic process involved in development; engulfment of apoptotic cell; and phosphatidylserine exposure on apoptotic cell surface. Predicted to localize to plasma membrane. Orthologous to human XKR5 (XK related 5); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; acetamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC497083; X Kell blood group precursor-related family, member 5; X-linked Kx blood group related 5; XK, Kell blood group complex subunit-related family, member 5; XK-related protein 5
Orthologs:
Homo sapiens (human) : XKR5 (XK related 5)  HGNC  Alliance
Mus musculus (house mouse) : Xkr5 (X-linked Kx blood group related 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Xkr5 (XK related 5)
Pan paniscus (bonobo/pygmy chimpanzee) : XKR5 (XK related 5)
Canis lupus familiaris (dog) : XKR5 (XK related 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Xkr5 (XK related 5)
Sus scrofa (pig) : XKR5 (XK related 5)
Chlorocebus sabaeus (African green monkey) : XKR5 (XK related 5)
Heterocephalus glaber (naked mole-rat) : Xkr5 (XK related 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01675,744,786 - 75,762,694 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1675,744,786 - 75,762,693 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01675,349,398 - 75,367,306 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41675,677,746 - 75,695,654 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11675,678,010 - 75,695,918 (+)NCBI
Celera1668,721,107 - 68,739,005 (+)NCBICelera
Cytogenetic Map16q12.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Xkr5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359335
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.