Vom1r1 (vomeronasal 1 receptor 1) - Rat Genome Database

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Gene: Vom1r1 (vomeronasal 1 receptor 1) Rattus norvegicus
Analyze
Symbol: Vom1r1
Name: vomeronasal 1 receptor 1
RGD ID: 1359116
Description: INTERACTS WITH Monobutylphthalate
Type: protein-coding
RefSeq Status: MODEL
Also known as: V1re5; vomernasal 1 receptor Vom1r1; vomeronasal 1 receptor, 1; vomeronasal 1 receptor, E5; vomeronasal type-1 receptor 4; vomeronasal V1r-type receptor V1re5
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2154,543,173 - 54,544,143 (-)NCBImRatBN7.2
Rnor_5.01176,374,471 - 176,375,367 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4149,437,215 - 49,438,111 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1149,440,159 - 49,441,056 (-)NCBI
Celera149,864,133 - 49,865,029 (+)NCBICelera
Cytogenetic Map1 NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:19952141  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:90
Count of miRNA genes:81
Interacting mature miRNAs:87
Transcripts:ENSRNOT00000049049
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_039101521   ⟹   XP_038957449
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2154,543,173 - 54,544,143 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038957449 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_038957449   ⟸   XM_039101521


Additional Information

Database Acc Id Source(s)
NCBI Gene 494234 ENTREZGENE
PhenoGen Vom1r1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2010-06-08 Vom1r1  vomeronasal 1 receptor, 1  V1re5  vomeronasal 1 receptor, E5  Symbol and Name updated 2325755 APPROVED
2008-03-07 V1re5  vomeronasal 1 receptor, E5  V1re5  vomeronasal V1r-type receptor V1re5  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-07-29 V1re5  vomeronasal V1r-type receptor V1re5      Symbol and Name status set to provisional 70820 PROVISIONAL