Tram1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 5 | 10,425,710 - 10,450,669 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 5,642,579 - 5,667,666 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 5,642,546 - 5,686,971 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 7,780,736 - 7,805,759 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 9,419,625 - 9,444,647 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 9,110,778 - 9,135,758 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 5,215,196 - 5,297,337 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 5,215,196 - 5,316,685 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 10,062,171 - 10,062,451 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Rnor_5.0 | 5 | 10,121,579 - 10,138,210 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 4,844,208 - 4,869,207 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 5 | 4,844,207 - 4,869,206 (+) | NCBI | | | | | Celera | 5 | 5,235,381 - 5,252,006 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | q11 | NCBI | | | | |
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TRAM1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 8 | 70,573,218 - 70,608,416 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 8 | 70,573,218 - 70,608,416 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 8 | 71,485,453 - 71,520,651 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 8 | 71,648,227 - 71,683,158 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 8 | 71,648,226 - 71,683,158 | NCBI | | | | | Celera | 8 | 67,483,078 - 67,518,322 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | q13.3 | NCBI | | | | | HuRef | 8 | 66,978,304 - 67,013,532 (-) | NCBI | | HuRef | | | CHM1_1 | 8 | 71,541,019 - 71,576,230 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 8 | 71,003,150 - 71,038,323 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Tram1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 1 | 13,634,917 - 13,660,134 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 1 | 13,634,922 - 13,660,134 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 1 | 13,564,693 - 13,589,910 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 1 | 13,564,698 - 13,589,910 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 1 | 13,554,783 - 13,579,945 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 1 | 13,549,916 - 13,575,078 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 1 | 13,514,581 - 13,539,714 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | A3 | NCBI | | | | | cM Map | 1 | 4.18 | NCBI | | | | |
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Tram1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955444 | 9,110,807 - 9,152,125 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955444 | 9,110,533 - 9,153,585 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TRAM1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 7 | 86,306,766 - 86,342,548 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 8 | 61,936,216 - 61,972,011 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 8 | 67,098,588 - 67,133,511 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 8 | 68,759,038 - 68,793,750 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 8 | 68,759,040 - 68,794,303 (-) | Ensembl | panpan1.1 | | panPan2 | |
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TRAM1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 29 | 19,669,622 - 19,703,707 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 29 | 19,669,628 - 19,703,669 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 29 | 19,929,189 - 19,963,216 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 29 | 19,766,644 - 19,800,987 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 29 | 19,766,644 - 19,800,983 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 29 | 19,804,740 - 19,838,512 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 29 | 19,871,008 - 19,905,124 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 29 | 20,151,950 - 20,186,017 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Tram1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405303 | 59,528,340 - 59,551,780 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936496 | 15,233,631 - 15,257,140 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936496 | 15,233,692 - 15,257,085 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TRAM1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 4 | 64,768,698 - 64,800,508 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 4 | 64,768,600 - 64,800,513 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 4 | 70,399,155 - 70,431,001 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TRAM1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 8 | 66,312,103 - 66,344,738 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 8 | 66,311,614 - 66,344,840 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666039 | 75,081,633 - 75,114,264 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Tram1 (Heterocephalus glaber - naked mole-rat) |
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