LOC112438088 (keratin-associated protein 10-12) - Rat Genome Database

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Gene: LOC112438088 (keratin-associated protein 10-12) Pan paniscus
Analyze
Symbol: LOC112438088
Name: keratin-associated protein 10-12
RGD ID: 13579174
Description: ASSOCIATED WITH autistic disorder (ortholog); autoimmune polyendocrine syndrome type 1 (ortholog); autosomal recessive nonsyndromic deafness 98 (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22240,739,284 - 40,741,415 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12135,610,337 - 35,612,289 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02130,988,028 - 30,989,931 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12144,282,632 - 44,283,507 (+)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
LOC112438088
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22240,739,284 - 40,741,415 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12135,610,337 - 35,612,289 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02130,988,028 - 30,989,931 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12144,282,632 - 44,283,507 (+)NCBIpanpan1.1PanPan1.1panPan2
KRTAP10-12
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382144,697,172 - 44,698,044 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2144,697,172 - 44,698,044 (+)EnsemblGRCh38hg38GRCh38
GRCh372146,117,087 - 46,117,959 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362144,941,515 - 44,942,387 (+)NCBINCBI36Build 36hg18NCBI36
Build 342144,941,514 - 44,942,387NCBI
Celera2131,224,656 - 31,225,528 (+)NCBICelera
Cytogenetic Map21q22.3NCBI
HuRef2131,491,138 - 31,492,010 (+)NCBIHuRef
CHM1_12145,677,920 - 45,678,792 (+)NCBICHM1_1
T2T-CHM13v2.02143,057,612 - 43,058,484 (+)NCBIT2T-CHM13v2.0
LOC119619413
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_02366605416,555,483 - 16,556,156 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_024926995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_024926995   ⟹   XP_024782763
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22240,739,284 - 40,741,415 (+)NCBI
NHGRI_mPanPan12135,610,337 - 35,612,289 (+)NCBI
Mhudiblu_PPA_v02130,988,028 - 30,989,931 (+)NCBI
PanPan1.12144,282,632 - 44,283,507 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_024782763 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_024782763   ⟸   XM_024926995
- Sequence:


Additional Information

Database Acc Id Source(s)
NCBI Gene LOC112438088 ENTREZGENE