DRD5P2 (dopamine receptor D5 pseudogene 2) - Rat Genome Database

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Gene: DRD5P2 (dopamine receptor D5 pseudogene 2) Homo sapiens
Analyze
Symbol: DRD5P2
Name: dopamine receptor D5 pseudogene 2
RGD ID: 1354254
HGNC Page HGNC:3028
Description: INTERACTS WITH aflatoxin B1; benzo[a]pyrene; N-Nitrosopyrrolidine
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: VALIDATED
Related Functional Gene: DRD5  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381144,689,614 - 144,691,842 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1144,274,892 - 144,277,993 (-)EnsemblGRCh38hg38GRCh38
GRCh371148,901,845 - 148,904,072 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361147,168,815 - 147,171,063 (+)NCBINCBI36Build 36hg18NCBI36
Cytogenetic Map1q21.1NCBI
CHM1_11146,057,841 - 146,060,238 (+)NCBICHM1_1
T2T-CHM13v2.01143,375,499 - 143,377,727 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:1387108   PMID:1765268   PMID:7890157   PMID:8125298   PMID:32513696  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:761
Count of miRNA genes:523
Interacting mature miRNAs:606
Transcripts:ENST00000309892, ENST00000421395, ENST00000535197
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 2
Low 8 5 3 16 3 1 6 11 2 16 15 1 1
Below cutoff 202 85 65 23 131 18 204 86 238 16 195 94 7 39 97 2

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000421395
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1144,274,892 - 144,277,993 (-)Ensembl
RefSeq Acc Id: NR_111001
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381144,689,614 - 144,691,842 (+)NCBI
CHM1_11146,057,740 - 146,059,968 (+)NCBI
T2T-CHM13v2.01143,375,499 - 143,377,727 (-)NCBI
Sequence:
Protein Sequences
GenBank Protein BAC05819 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences


Additional Information

Database Acc Id Source(s)
COSMIC DRD5P2 COSMIC
Ensembl Genes ENSG00000175658 Ensembl
GTEx ENSG00000175658 GTEx
HGNC ID HGNC:3028 ENTREZGENE
Human Proteome Map DRD5P2 Human Proteome Map
NCBI Gene 1818 ENTREZGENE
PharmGKB PA27482 PharmGKB