DNMT1 (DNA methyltransferase 1) - Rat Genome Database

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Gene: DNMT1 (DNA methyltransferase 1) Homo sapiens
Analyze
Symbol: DNMT1
Name: DNA methyltransferase 1
RGD ID: 1354178
HGNC Page HGNC
Description: Exhibits DNA (cytosine-5-)-methyltransferase activity; DNA binding activity; and promoter-specific chromatin binding activity. Involved in several processes, including maintenance of DNA methylation; regulation of chromatin organization; and regulation of gene expression. Localizes to nucleus. Implicated in Graves' disease; autosomal dominant cerebellar ataxia, deafness and narcolepsy; hereditary sensory neuropathy; and hereditary sensory neuropathy type 1E. Biomarker of several diseases, including autoimmune disease of musculoskeletal system (multiple); endometriosis (multiple); lung cancer (multiple); myeloid leukemia (multiple); and pancreatic ductal carcinoma.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: ADCADN; AIM; CXXC finger protein 9; CXXC-type zinc finger protein 9; CXXC9; DNA (cytosine-5)-methyltransferase 1; DNA (cytosine-5-)-methyltransferase 1; DNA methyltransferase HsaI; DNA MTase HsaI; DNMT; FLJ16293; HSN1E; m.HsaI; MCMT; MGC104992
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1910,133,342 - 10,231,286 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl1910,133,345 - 10,231,286 (-)EnsemblGRCh38hg38GRCh38
GRCh381910,133,346 - 10,194,953 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371910,244,022 - 10,305,629 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361910,105,022 - 10,166,811 (-)NCBINCBI36hg18NCBI36
Build 341910,105,022 - 10,166,811NCBI
Celera1910,139,454 - 10,201,147 (-)NCBI
Cytogenetic Map19p13.2NCBI
HuRef199,824,670 - 9,886,268 (-)NCBIHuRef
CHM1_11910,244,305 - 10,306,077 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
acute myeloid leukemia  (IEP)
adenocarcinoma  (EXP)
Alcoholic Fatty Liver  (ISO)
alopecia areata  (IEP)
anxiety disorder  (EXP)
asthma  (EXP,ISO)
Ataxia  (IAGP)
autoimmune disease  (ISO)
autosomal dominant cerebellar ataxia, deafness and narcolepsy  (IAGP)
Beckwith-Wiedemann syndrome  (IAGP)
Binge Drinking  (ISO)
Brain Injuries  (ISO)
Breast Neoplasms  (EXP)
bronchiolo-alveolar adenocarcinoma  (IEP)
Carcinogenesis  (ISO)
carcinoma  (EXP)
cerebellar ataxia  (IAGP)
Charcot-Marie-Tooth disease  (IAGP)
choline deficiency disease  (ISO)
chronic myeloid leukemia  (IEP)
clear cell renal cell carcinoma  (EXP)
Colonic Neoplasms  (EXP,ISO)
Colorectal Neoplasms  (ISO)
congenital heart disease  (ISO)
congestive heart failure  (ISO)
dementia  (EXP)
Endometrial Neoplasms  (IEP)
Endometrioid Carcinomas  (IEP)
endometriosis  (IEP)
endometriosis of uterus  (IEP)
Experimental Arthritis  (EXP)
Fetal Growth Retardation  (ISO)
Graves' disease  (IAGP)
Hearing Loss  (EXP)
hepatocellular carcinoma  (ISO)
hereditary sensory neuropathy  (EXP,IAGP)
hereditary sensory neuropathy type 1E  (IAGP)
Hyperalgesia  (ISO)
liver cirrhosis  (ISO)
lung cancer  (IEP)
lung carcinoma  (ISO)
medulloblastoma  (EXP)
meningioma  (IAGP)
middle cerebral artery infarction  (ISO)
mucoepidermoid carcinoma  (IEP)
Neoplasm Invasiveness  (EXP)
Oral Lichen Planus  (IEP)
Ovarian Neoplasms  (IAGP)
pancreatic ductal carcinoma  (EXP,IEP)
Pancreatic Intraepithelial Neoplasia  (IEP)
Peritoneal Fibrosis  (ISO)
Pituitary Stalk Interruption Syndrome  (IAGP)
prostate adenocarcinoma  (ISO)
prostate cancer  (IEP)
prostate carcinoma in situ  (EXP)
Prostatic Neoplasms  (EXP,ISO)
rheumatoid arthritis  (IEP)
schizophrenia  (IEP,ISO)
sleep disorder  (IAGP)
Stomach Neoplasms  (EXP)
systemic lupus erythematosus  (IEP)
type 2 diabetes mellitus  (ISO)
urinary bladder cancer  (IEP)
Uterine Cervical Neoplasms  (IEP)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (EXP)
(-)-epigallocatechin 3-gallate  (EXP)
(S)-nicotine  (ISO)
1,2-dimethylhydrazine  (ISO)
1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-1,3-dihydro-2-benzofuran-5-carbonitrile  (ISO)
1-chloro-2,4-dinitrobenzene  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-dinitrotoluene  (ISO)
3,3'-diindolylmethane  (EXP)
3,5-diethoxycarbonyl-1,4-dihydrocollidine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-methylcholanthrene  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-\{[4-(dimethylamino)phenyl]diazenyl\}phenyl-beta-lactoside  (EXP)
4-hydroxyphenyl retinamide  (ISO)
5-(hydroxymethyl)cytosine  (EXP)
5-aza-2'-deoxycytidine  (EXP,ISO)
5-azacytidine  (EXP,ISO)
6-prenylnaringenin  (EXP)
7,12-dimethyltetraphene  (ISO)
8-hydroxy-2'-deoxyguanosine  (EXP)
acetamide  (ISO)
acetic acid  (EXP)
acrylamide  (EXP)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (EXP)
all-trans-retinoic acid  (EXP)
allethrin  (ISO)
amitriptyline  (ISO)
amphetamine  (ISO)
anthra[1,9-cd]pyrazol-6(2H)-one  (ISO)
arsane  (EXP,ISO)
arsenic atom  (EXP,ISO)
arsenous acid  (EXP,ISO)
atrazine  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzophenanthridine  (EXP)
berberine  (EXP)
beta-naphthoflavone  (EXP)
bis(2-chloroethyl) sulfide  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bleomycin A2  (EXP)
Brodifacoum  (EXP)
buta-1,3-diene  (ISO)
butyric acid  (ISO)
cadmium atom  (EXP,ISO)
cadmium dichloride  (EXP)
caffeine  (ISO)
calciol  (EXP)
calcitriol  (EXP)
carbon nanotube  (ISO)
casticin  (EXP)
choline  (ISO)
chromium atom  (ISO)
cisplatin  (EXP,ISO)
citalopram  (ISO)
cladribine  (EXP)
clofibrate  (ISO)
cobalt dichloride  (EXP)
copper atom  (EXP)
copper(0)  (EXP)
coumestrol  (EXP)
crocidolite asbestos  (EXP)
curcumin  (EXP,ISO)
cyclophosphamide  (EXP)
cyclosporin A  (EXP,ISO)
cyhalothrin  (ISO)
cypermethrin  (ISO)
D-glucose  (EXP)
daidzein  (ISO)
daidzein 7-O-beta-D-glucoside  (ISO)
DDE  (ISO)
DDT  (ISO)
deoxynivalenol  (ISO)
desferrioxamine B  (EXP)
dexamethasone  (ISO)
diarsenic trioxide  (EXP,ISO)
dibutyl phthalate  (ISO)
dicrotophos  (EXP)
diethylstilbestrol  (ISO)
Difenacoum  (EXP)
dihydro-beta-erythroidine  (ISO)
dimethyl sulfate  (EXP)
dimethyl sulfoxide  (EXP)
dioxygen  (EXP)
disodium selenite  (EXP)
doxorubicin  (EXP,ISO)
elemental selenium  (ISO)
endosulfan  (EXP)
Enterolactone  (EXP)
entinostat  (ISO)
enzyme inhibitor  (EXP)
ethanol  (ISO)
etoposide  (EXP,ISO)
fenvalerate  (ISO)
fisetin  (EXP)
Flocoumafen  (EXP)
folic acid  (EXP,ISO)
formaldehyde  (EXP)
fulvestrant  (EXP,ISO)
fumonisin B1  (EXP)
gemcitabine  (EXP)
genistein  (EXP,ISO)
genistein 7-O-beta-D-glucoside  (ISO)
glucaric acid  (ISO)
glucose  (EXP)
glycine betaine  (ISO)
glycitein  (ISO)
glycitin  (ISO)
guggulsterone  (EXP)
hexadecanoic acid  (EXP)
hexane  (ISO)
homocysteine  (EXP)
hydrogen peroxide  (EXP,ISO)
hydroquinone  (EXP)
hydroxyurea  (EXP)
hypochlorous acid  (ISO)
ionomycin  (EXP)
L-methionine  (ISO)
lead diacetate  (ISO)
lead(0)  (EXP,ISO)
lead(2+)  (EXP,ISO)
leptomycin B  (EXP)
linsidomine  (ISO)
magnesium atom  (EXP)
methamphetamine  (ISO)
methyl methanesulfonate  (EXP)
methylarsonic acid  (ISO)
methylmercury chloride  (ISO)
mitomycin C  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
myricetin  (EXP)
N-acetyl-L-cysteine  (EXP)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (EXP,ISO)
N-ethyl-N-nitrosourea  (ISO)
N-nitrosodiethylamine  (ISO)
nickel atom  (EXP)
nicotinamide  (ISO)
nicotine  (ISO)
okadaic acid  (EXP)
oxaliplatin  (ISO)
ozone  (EXP)
paracetamol  (EXP,ISO)
paraquat  (EXP)
pelargonidin  (ISO)
pentachlorophenol  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (EXP,ISO)
phenobarbital  (ISO)
PhIP  (ISO)
phorbol 13-acetate 12-myristate  (EXP)
piperonyl butoxide  (ISO)
pirinixic acid  (ISO)
piroxicam  (EXP)
procyanidin B2  (EXP)
pterostilbene  (EXP)
Pyridostigmine bromide  (EXP)
quercetin  (EXP)
quinoline  (EXP,ISO)
resveratrol  (EXP,ISO)
rosmarinic acid  (EXP)
S-adenosyl-L-homocysteine  (EXP,ISO)
S-adenosyl-L-methioninate  (EXP)
S-adenosyl-L-methionine  (EXP)
selenium atom  (ISO)
silicon dioxide  (EXP)
sinefungin  (EXP)
sirolimus  (EXP)
sodium arsenite  (EXP,ISO)
sodium fluoride  (ISO)
Soman  (ISO)
streptozocin  (ISO)
sulforaphane  (EXP)
T-2 toxin  (ISO)
tamoxifen  (ISO)
testosterone  (EXP,ISO)
tetrachloromethane  (ISO)
thapsigargin  (ISO)
topotecan  (ISO)
Tributyltin oxide  (ISO)
trichloroethene  (ISO)
triclosan  (EXP)
trimellitic anhydride  (ISO)
trimethylarsine oxide  (ISO)
triptonide  (ISO)
troglitazone  (EXP,ISO)
tungsten  (ISO)
uranium atom  (ISO)
valproic acid  (ISO)
vancomycin  (ISO)
vinclozolin  (ISO)
vitamin E  (EXP)
withaferin A  (EXP)
zearalenone  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
aging  (ISO)
brain development  (ISO)
C-5 methylation of cytosine  (IEA)
cellular response to amino acid stimulus  (IEA,ISO)
cellular response to lead ion  (ISO)
cellular response to nerve growth factor stimulus  (ISO)
cellular response to platelet-derived growth factor stimulus  (ISO)
cellular response to transforming growth factor beta stimulus  (ISO)
chromatin organization  (IEA)
DNA hypermethylation  (ISO)
DNA methylation  (ISO,TAS)
DNA methylation involved in embryo development  (IEA,ISO)
DNA methylation on cytosine  (ISO)
DNA methylation on cytosine within a CG sequence  (ISO)
gene silencing  (IEA)
maintenance of DNA methylation  (IDA,ISO)
methylation  (IEA)
negative regulation of gene expression  (IMP,ISO)
negative regulation of gene expression, epigenetic  (TAS)
negative regulation of histone H3-K9 methylation  (IMP)
negative regulation of transcription by RNA polymerase II  (IEA,ISO)
negative regulation of transcription, DNA-templated  (ISO)
negative regulation of vascular associated smooth muscle cell apoptotic process  (IMP)
negative regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching  (IMP)
neuron differentiation  (ISO)
positive regulation of DNA methylation-dependent heterochromatin assembly  (IMP)
positive regulation of gene expression  (IMP)
positive regulation of histone H3-K4 methylation  (IMP)
positive regulation of vascular associated smooth muscle cell proliferation  (IMP)
Ras protein signal transduction  (IMP)
regulation of cell population proliferation  (ISO)
regulation of gene expression  (ISO)
response to activity  (ISO)
response to caffeine  (ISO)
response to drug  (ISO)
response to estradiol  (ISO)
response to ethanol  (ISO)
response to heat  (ISO)
response to ionizing radiation  (ISO)
response to lead ion  (ISO)
response to lipopolysaccharide  (ISO)
response to nutrient levels  (ISO)
response to organic substance  (ISO)
response to testosterone  (ISO)
response to toxic substance  (ISO)
response to vitamin A  (ISO)
S-adenosylmethionine metabolic process  (ISO)

Cellular Component

References

References - curated
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Additional References at PubMed
PMID:1594447   PMID:1968655   PMID:2014266   PMID:3210246   PMID:7760804   PMID:8917520   PMID:8940105   PMID:9302295   PMID:9333948   PMID:9449671   PMID:10325416   PMID:10444590  
PMID:10449766   PMID:10615135   PMID:10721735   PMID:10753866   PMID:10801130   PMID:10888872   PMID:10888886   PMID:10947852   PMID:11005794   PMID:11399088   PMID:11728338   PMID:11748221  
PMID:11834837   PMID:11847125   PMID:11932749   PMID:11940649   PMID:12145218   PMID:12171929   PMID:12354094   PMID:12473678   PMID:12477932   PMID:12496760   PMID:12530095   PMID:12538344  
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PMID:15735013   PMID:15755728   PMID:15762053   PMID:15790807   PMID:15799776   PMID:15870198   PMID:15956212   PMID:16053511   PMID:16085498   PMID:16169070   PMID:16227093   PMID:16314526  
PMID:16322686   PMID:16344560   PMID:16357870   PMID:16423997   PMID:16424002   PMID:16497664   PMID:16537562   PMID:16769694   PMID:16791210   PMID:16801630   PMID:16861352   PMID:16897079  
PMID:16916647   PMID:16960727   PMID:16963560   PMID:16983096   PMID:16998846   PMID:17015478   PMID:17030625   PMID:17053888   PMID:17067458   PMID:17081533   PMID:17081983   PMID:17085482  
PMID:17093909   PMID:17124180   PMID:17178861   PMID:17200670   PMID:17312023   PMID:17322882   PMID:17359920   PMID:17470536   PMID:17492476   PMID:17532557   PMID:17538945   PMID:17657744  
PMID:17673620   PMID:17698033   PMID:17707923   PMID:17716861   PMID:17893234   PMID:17931718   PMID:17934516   PMID:17965595   PMID:17967891   PMID:17972916   PMID:17991895   PMID:17994007  
PMID:18038118   PMID:18049164   PMID:18095639   PMID:18158899   PMID:18198215   PMID:18202356   PMID:18204201   PMID:18252747   PMID:18253830   PMID:18404674   PMID:18413740   PMID:18414412  
PMID:18499700   PMID:18505931   PMID:18563322   PMID:18567946   PMID:18680430   PMID:18754681   PMID:18829110   PMID:18931722   PMID:19016755   PMID:19019634   PMID:19064572   PMID:19124506  
PMID:19161160   PMID:19173286   PMID:19211935   PMID:19236003   PMID:19246518   PMID:19275888   PMID:19279403   PMID:19282482   PMID:19292979   PMID:19339266   PMID:19386473   PMID:19394279  
PMID:19399408   PMID:19399937   PMID:19450230   PMID:19465937   PMID:19468253   PMID:19531213   PMID:19531770   PMID:19539327   PMID:19615732   PMID:19763880   PMID:19798101   PMID:19798569  
PMID:19800870   PMID:19896490   PMID:19932585   PMID:19936946   PMID:19943104   PMID:19957555   PMID:20044957   PMID:20071334   PMID:20071580   PMID:20081831   PMID:20093774   PMID:20147412  
PMID:20192566   PMID:20192608   PMID:20228804   PMID:20301532   PMID:20335008   PMID:20354000   PMID:20381114   PMID:20398055   PMID:20428781   PMID:20570896   PMID:20588031   PMID:20592467  
PMID:20593030   PMID:20613874   PMID:20620135   PMID:20840813   PMID:20875141   PMID:20920981   PMID:20940144   PMID:20951977   PMID:20970125   PMID:20980350   PMID:21042757   PMID:21045206  
PMID:21078759   PMID:21151116   PMID:21163962   PMID:21229291   PMID:21266713   PMID:21268065   PMID:21282530   PMID:21296890   PMID:21311766   PMID:21321201   PMID:21347439   PMID:21353307  
PMID:21378168   PMID:21389349   PMID:21395176   PMID:21406692   PMID:21458988   PMID:21459093   PMID:21478913   PMID:21523767   PMID:21539677   PMID:21565170   PMID:21565830   PMID:21573703  
PMID:21592522   PMID:21619587   PMID:21628590   PMID:21636528   PMID:21654808   PMID:21670149   PMID:21735817   PMID:21745816   PMID:21756783   PMID:21757290   PMID:21791605   PMID:21826395  
PMID:21873635   PMID:21887463   PMID:21900206   PMID:21947282   PMID:21962230   PMID:21966451   PMID:21999220   PMID:22048249   PMID:22055183   PMID:22064703   PMID:22072770   PMID:22094255  
PMID:22110720   PMID:22135303   PMID:22167392   PMID:22219193   PMID:22264301   PMID:22274925   PMID:22278882   PMID:22295098   PMID:22301400   PMID:22317856   PMID:22323818   PMID:22328086  
PMID:22338191   PMID:22349384   PMID:22362755   PMID:22403725   PMID:22411829   PMID:22455563   PMID:22520950   PMID:22547080   PMID:22586326   PMID:22606318   PMID:22739025   PMID:22768205  
PMID:22795133   PMID:22879518   PMID:22894906   PMID:22898998   PMID:22942708   PMID:22975348   PMID:23038753   PMID:23041765   PMID:23049933   PMID:23064049   PMID:23072722   PMID:23079992  
PMID:23082233   PMID:23125218   PMID:23127209   PMID:23242655   PMID:23249948   PMID:23254386   PMID:23280764   PMID:23318422   PMID:23364257   PMID:23365052   PMID:23393137   PMID:23463006  
PMID:23478041   PMID:23545144   PMID:23549984   PMID:23624957   PMID:23652987   PMID:23658227   PMID:23671287   PMID:23706494   PMID:23708667   PMID:23771421   PMID:23775084   PMID:23820632  
PMID:23846337   PMID:23867713   PMID:23918800   PMID:23918933   PMID:23938174   PMID:23957506   PMID:23990460   PMID:24001151   PMID:24013172   PMID:24094292   PMID:24098518   PMID:24107992  
PMID:24204295   PMID:24247422   PMID:24292684   PMID:24311629   PMID:24368767   PMID:24389641   PMID:24434851   PMID:24441913   PMID:24449497   PMID:24459426   PMID:24464625   PMID:24475290  
PMID:24492612   PMID:24502362   PMID:24515776   PMID:24532244   PMID:24623306   PMID:24631383   PMID:24637615   PMID:24675762   PMID:24714841   PMID:24782312   PMID:24833086   PMID:24859147  
PMID:24875904   PMID:24911372   PMID:24913034   PMID:24947242   PMID:24958773   PMID:25004396   PMID:25015109   PMID:25033457   PMID:25038421   PMID:25107489   PMID:25184681   PMID:25189999  
PMID:25207720   PMID:25231260   PMID:25284287   PMID:25315069   PMID:25319390   PMID:25349215   PMID:25378232   PMID:25389112   PMID:25420499   PMID:25444908   PMID:25451918   PMID:25452147  
PMID:25455074   PMID:25461380   PMID:25476119   PMID:25512445   PMID:25544563   PMID:25547067   PMID:25550796   PMID:25595591   PMID:25596970   PMID:25665578   PMID:25678562   PMID:25700986  
PMID:25705251   PMID:25738352   PMID:25746661   PMID:25753001   PMID:25820252   PMID:25822089   PMID:25854163   PMID:25865490   PMID:25886188   PMID:25888794   PMID:25892014   PMID:25899090  
PMID:25908435   PMID:25921289   PMID:25927928   PMID:25948775   PMID:25950085   PMID:25960197   PMID:25982273   PMID:25990724   PMID:26056945   PMID:26065575   PMID:26070743   PMID:26085088  
PMID:26090723   PMID:26120002   PMID:26139044   PMID:26162541   PMID:26186194   PMID:26186941   PMID:26211580   PMID:26261487   PMID:26299326   PMID:26305882   PMID:26307088   PMID:26333125  
PMID:26337869   PMID:26344197   PMID:26362062   PMID:26416384   PMID:26454216   PMID:26496610   PMID:26497367   PMID:26527279   PMID:26530812   PMID:26602018   PMID:26638075   PMID:26676363  
PMID:26774342   PMID:26782424   PMID:26794444   PMID:26815200   PMID:26850336   PMID:26850594   PMID:26850820   PMID:26864203   PMID:26872375   PMID:26892683   PMID:26929335   PMID:26966018  
PMID:26980709   PMID:26983918   PMID:27021683   PMID:27030811   PMID:27045799   PMID:27049577   PMID:27071379   PMID:27087738   PMID:27114453   PMID:27142060   PMID:27165229   PMID:27169697  
PMID:27177222   PMID:27197203   PMID:27212035   PMID:27237591   PMID:27237979   PMID:27259275   PMID:27281235   PMID:27286455   PMID:27292127   PMID:27322146   PMID:27405758   PMID:27449289  
PMID:27475839   PMID:27530451   PMID:27533450   PMID:27543768   PMID:27582487   PMID:27602171   PMID:27609421   PMID:27634302   PMID:27637577   PMID:27651312   PMID:27659015   PMID:27666771  
PMID:27720955   PMID:27728808   PMID:27789275   PMID:27826836   PMID:27845898   PMID:27859417   PMID:27871462   PMID:27871469   PMID:27880917   PMID:27881579   PMID:27886214   PMID:27906180  
PMID:27922198   PMID:27926873   PMID:28036257   PMID:28036297   PMID:28067227   PMID:28068325   PMID:28093267   PMID:28100769   PMID:28102109   PMID:28112215   PMID:28143904   PMID:28215845  
PMID:28222434   PMID:28253728   PMID:28277545   PMID:28300471   PMID:28319085   PMID:28323001   PMID:28334952   PMID:28336124   PMID:28349196   PMID:28376405   PMID:28380423   PMID:28414276  
PMID:28427182   PMID:28459195   PMID:28472596   PMID:28473984   PMID:28484249   PMID:28515276   PMID:28533407   PMID:28542810   PMID:28544374   PMID:28561650   PMID:28578476   PMID:28627705  
PMID:28656724   PMID:28659310   PMID:28749461   PMID:28754593   PMID:28764788   PMID:28803780   PMID:28811844   PMID:28867761   PMID:28869603   PMID:28894282   PMID:28940947   PMID:28986522  
PMID:29053958   PMID:29074044   PMID:29137822   PMID:29221985   PMID:29223407   PMID:29247823   PMID:29268763   PMID:29297981   PMID:29313974   PMID:29336230   PMID:29338433   PMID:29400588  
PMID:29410709   PMID:29466247   PMID:29467282   PMID:29471350   PMID:29497996   PMID:29507755   PMID:29511261   PMID:29568061   PMID:29568927   PMID:29596883   PMID:29598829   PMID:29634367  
PMID:29673587   PMID:29685765   PMID:29691401   PMID:29693707   PMID:29709639   PMID:29710483   PMID:29758262   PMID:29759079   PMID:29795311   PMID:29854080   PMID:29901158   PMID:29905030  
PMID:29955894   PMID:29956566   PMID:29973691   PMID:29975921   PMID:29990858   PMID:30002361   PMID:30015946   PMID:30021884   PMID:30064482   PMID:30078217   PMID:30104358   PMID:30110565  
PMID:30111769   PMID:30146796   PMID:30165906   PMID:30178275   PMID:30196744   PMID:30226601   PMID:30230311   PMID:30273642   PMID:30287284   PMID:30301766   PMID:30353102   PMID:30359738  
PMID:30367141   PMID:30411123   PMID:30415952   PMID:30463901   PMID:30470842   PMID:30548403   PMID:30585266   PMID:30585729   PMID:30663502   PMID:30707290   PMID:30720097   PMID:30786140  
PMID:30804394   PMID:30804502   PMID:30938030   PMID:30940648   PMID:30948266   PMID:30950914   PMID:30982493   PMID:31059266   PMID:31073040   PMID:31091453   PMID:31097223   PMID:31114984  
PMID:31127647   PMID:31130994   PMID:31154022   PMID:31167695   PMID:31171909   PMID:31194977   PMID:31239290   PMID:31277942   PMID:31322780   PMID:31400111   PMID:31426844   PMID:31483543  
PMID:31515224   PMID:31601979   PMID:31615086   PMID:31628193   PMID:31713648   PMID:31746077   PMID:31755366   PMID:31804802   PMID:31931367   PMID:31974603   PMID:31980649   PMID:32051553  
PMID:32120844   PMID:32144273   PMID:32159363   PMID:32211850   PMID:32220303   PMID:32236621   PMID:32312426   PMID:32324272   PMID:32353859   PMID:32416067   PMID:32675241   PMID:32709850  
PMID:32786267   PMID:32819567   PMID:32855526   PMID:32861793   PMID:32990237   PMID:32999320   PMID:33005030   PMID:33039802   PMID:33060197   PMID:33170271   PMID:33527791  


Genomics

Comparative Map Data
DNMT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1910,133,342 - 10,231,286 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl1910,133,345 - 10,231,286 (-)EnsemblGRCh38hg38GRCh38
GRCh381910,133,346 - 10,194,953 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371910,244,022 - 10,305,629 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361910,105,022 - 10,166,811 (-)NCBINCBI36hg18NCBI36
Build 341910,105,022 - 10,166,811NCBI
Celera1910,139,454 - 10,201,147 (-)NCBI
Cytogenetic Map19p13.2NCBI
HuRef199,824,670 - 9,886,268 (-)NCBIHuRef
CHM1_11910,244,305 - 10,306,077 (-)NCBICHM1_1
Dnmt1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39920,818,501 - 20,871,184 (-)NCBIGRCm39mm39
GRCm39 Ensembl920,818,505 - 20,871,184 (-)Ensembl
GRCm38920,907,206 - 20,959,888 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl920,907,209 - 20,959,888 (-)EnsemblGRCm38mm10GRCm38
MGSCv37920,711,653 - 20,757,317 (-)NCBIGRCm37mm9NCBIm37
MGSCv36920,657,611 - 20,703,267 (-)NCBImm8
Celera918,175,907 - 18,221,569 (-)NCBICelera
Cytogenetic Map9A3NCBI
cM Map97.66NCBI
Dnmt1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2819,440,611 - 19,486,659 (-)NCBI
Rnor_6.0 Ensembl821,922,515 - 21,968,495 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0821,922,515 - 21,968,495 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0821,978,830 - 22,024,656 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4819,926,995 - 19,973,256 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1819,927,666 - 19,973,220 (-)NCBI
Celera820,835,612 - 20,881,380 (-)NCBICelera
Cytogenetic Map8q13NCBI
Dnmt1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554951,465,480 - 1,505,462 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554951,465,529 - 1,505,379 (-)NCBIChiLan1.0ChiLan1.0
DNMT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11910,342,478 - 10,390,397 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1910,342,478 - 10,406,972 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0199,681,847 - 9,745,334 (-)NCBIMhudiblu_PPA_v0panPan3
DNMT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12050,872,213 - 50,928,352 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2050,879,527 - 50,928,029 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2050,741,748 - 50,797,884 (+)NCBI
ROS_Cfam_1.02051,393,895 - 51,450,128 (+)NCBI
UMICH_Zoey_3.12050,599,735 - 50,657,798 (+)NCBI
UNSW_CanFamBas_1.02051,028,945 - 51,085,072 (+)NCBI
UU_Cfam_GSD_1.02051,269,676 - 51,325,956 (+)NCBI
Dnmt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118209,789,213 - 209,834,531 (+)NCBI
SpeTri2.0NW_004936659520,181 - 565,496 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNMT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl268,981,564 - 69,029,919 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1268,981,564 - 69,040,364 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2269,309,511 - 69,357,838 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DNMT1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.169,199,006 - 9,263,890 (-)NCBI
ChlSab1.1 Ensembl69,199,003 - 9,263,607 (-)Ensembl
Dnmt1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248282,316,042 - 2,358,866 (-)NCBI

Position Markers
D19S830  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371910,244,079 - 10,244,332UniSTSGRCh37
Build 361910,105,079 - 10,105,332RGDNCBI36
Celera1910,139,511 - 10,139,764RGD
Cytogenetic Map19p13.2UniSTS
HuRef199,824,727 - 9,824,980UniSTS
Stanford-G3 RH Map1958.0UniSTS
GeneMap99-GB4 RH Map1967.48UniSTS
Whitehead-RH Map1952.0UniSTS
NCBI RH Map1987.9UniSTS
GeneMap99-G3 RH Map1958.0UniSTS
RH18124  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371910,244,176 - 10,244,307UniSTSGRCh37
Build 361910,105,176 - 10,105,307RGDNCBI36
Celera1910,139,608 - 10,139,739RGD
Cytogenetic Map19p13.2UniSTS
HuRef199,824,824 - 9,824,955UniSTS
GeneMap99-GB4 RH Map1975.92UniSTS

miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
MIR152hsa-miR-152-3pMirtarbaseexternal_infoLuciferase reporter assayFunctional MTI20146264
MIR152hsa-miR-152-3pMirtarbaseexternal_infoLuciferase reporter assay//Microarray//qRT-PCR//WeFunctional MTI20841484
MIR152hsa-miR-152-3pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCR//Western blot//Functional MTI20578129
MIR152hsa-miR-152-3pMirtarbaseexternal_infoImmunoblot//Immunoprecipitaion//Luciferase reporteFunctional MTI23125218
MIR152hsa-miR-152-3pOncomiRDBexternal_infoNANA23318422
MIR152hsa-miR-152-3pOncomiRDBexternal_infoNANA22935141
MIR152hsa-miR-152-3pOncomiRDBexternal_infoNANA20841484
MIR152hsa-miR-152-3pOncomiRDBexternal_infoNANA20578129
MIR152hsa-miR-152-3pOncomiRDBexternal_infoNANA20146264
MIR152hsa-miR-152-5pTarbaseexternal_infoReporter GenePOSITIVE
MIR152hsa-miR-152-5pTarbaseexternal_infoqPCRPOSITIVE
MIR152hsa-miR-152-5pTarbaseexternal_infoWesternblitPOSITIVE
MIR152hsa-miR-152-5pMirecordsexternal_infoNANA20146264
MIR342hsa-miR-342-3pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCR//Western blotFunctional MTI21565830
MIR342hsa-miR-342-3pMirecordsexternal_info{changed}NA21565830
MIR342hsa-miR-342-3pOncomiRDBexternal_infoNANA21565830
MIR301Bhsa-miR-301bMirtarbaseexternal_infoLuciferase reporter assayNon-Functional MTI20146264
MIR126hsa-miR-126-3pMirtarbaseexternal_infoFlow//Luciferase reporter assay//Microarray//qRT-PFunctional MTI21165896
MIR126hsa-miR-126-3pMirtarbaseexternal_infoFlow//Luciferase reporter assay//qRT-PCR//Western Functional MTI21538319
MIR29B1hsa-miR-29b-3pMirtarbaseexternal_infoimmunoblot//Luciferase reporter assay//qRT-PCRNon-Functional MTI19211935
MIR140hsa-miR-140-5pMirtarbaseexternal_infoImmunohistochemistry//Luciferase reporter assay//MFunctional MTI22898998
MIR140hsa-miR-140-3pOncomiRDBexternal_infoNANA22898998
MIR185hsa-miR-185-5pOncomiRDBexternal_infoNANA23318422
MIR185hsa-miR-185-5pOncomiRDBexternal_infoNANA21962230
MIR29B2hsa-miR-29b-3pMirtarbaseexternal_infoimmunoblot//Luciferase reporter assay//qRT-PCRNon-Functional MTI19211935
MIR148Ahsa-miR-148a-3pMirtarbaseexternal_infoLuciferase reporter assayFunctional MTI20146264
MIR148Ahsa-miR-148a-3pMirtarbaseexternal_infoqRT-PCR//Luciferase reporter assay//Western blotFunctional MTI20483747
MIR148Ahsa-miR-148a-3pMirtarbaseexternal_infoFlow//qRT-PCR//Western blotFunctional MTI22167392
MIR148Ahsa-miR-148a-3pMirecordsexternal_infoNANA20146264
MIR148Ahsa-miR-148a-3pOncomiRDBexternal_infoNANA22935141
MIR148Ahsa-miR-148a-3pOncomiRDBexternal_infoNANA20146264
MIR185hsa-miR-185-5pMirtarbaseexternal_infoImmunoprecipitaion//Luciferase reporter assay//MicFunctional MTI21962230

Predicted Target Of
Summary Value
Count of predictions:9027
Count of miRNA genes:1353
Interacting mature miRNAs:1827
Transcripts:ENST00000340748, ENST00000359526, ENST00000540357, ENST00000585843, ENST00000585920, ENST00000586086, ENST00000586588, ENST00000586667, ENST00000586799, ENST00000586800, ENST00000586988, ENST00000587197, ENST00000587604, ENST00000588118, ENST00000588913, ENST00000588952, ENST00000589091, ENST00000589294, ENST00000589349, ENST00000589351, ENST00000589538, ENST00000590619, ENST00000591239, ENST00000591764, ENST00000591798, ENST00000592054, ENST00000592342, ENST00000592705, ENST00000593049
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 2192 1643 1278 244 1397 123 3518 965 2175 190 1420 1586 137 1170 1974 6
Low 247 1348 448 380 554 342 839 1232 1559 229 40 27 38 1 34 814 2
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_028016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001130823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001318730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001318731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB209413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC010077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC011511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC020931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF180682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF290894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH008119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH009674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY927518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC092517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC126227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC144093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX379258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA653750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HY245803 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT584038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X63692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000340748   ⟹   ENSP00000345739
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,346 - 10,195,135 (-)Ensembl
RefSeq Acc Id: ENST00000359526   ⟹   ENSP00000352516
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,346 - 10,194,953 (-)Ensembl
RefSeq Acc Id: ENST00000585843
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,154,664 - 10,160,263 (-)Ensembl
RefSeq Acc Id: ENST00000585920
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,160,207 - 10,162,983 (-)Ensembl
RefSeq Acc Id: ENST00000586086
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,180,463 - 10,184,559 (-)Ensembl
RefSeq Acc Id: ENST00000586588
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,345 - 10,144,754 (-)Ensembl
RefSeq Acc Id: ENST00000586667
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,148,925 - 10,151,697 (-)Ensembl
RefSeq Acc Id: ENST00000586799   ⟹   ENSP00000467260
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,149,948 - 10,154,977 (-)Ensembl
RefSeq Acc Id: ENST00000586800   ⟹   ENSP00000465555
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,180,355 - 10,201,197 (-)Ensembl
RefSeq Acc Id: ENST00000586988   ⟹   ENSP00000464958
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,168,330 - 10,194,904 (-)Ensembl
RefSeq Acc Id: ENST00000587197
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,137,888 - 10,140,195 (-)Ensembl
RefSeq Acc Id: ENST00000587604
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,140,529 - 10,142,074 (-)Ensembl
RefSeq Acc Id: ENST00000588118   ⟹   ENSP00000465223
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,175,540 - 10,201,192 (-)Ensembl
RefSeq Acc Id: ENST00000588913   ⟹   ENSP00000467125
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,367 - 10,140,130 (-)Ensembl
RefSeq Acc Id: ENST00000588952   ⟹   ENSP00000467050
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,173,090 - 10,231,286 (-)Ensembl
RefSeq Acc Id: ENST00000589091
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,140,689 - 10,141,446 (-)Ensembl
RefSeq Acc Id: ENST00000589294
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,137,467 - 10,138,470 (-)Ensembl
RefSeq Acc Id: ENST00000589349
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,159,912 - 10,166,671 (-)Ensembl
RefSeq Acc Id: ENST00000589351
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,140,254 - 10,141,572 (-)Ensembl
RefSeq Acc Id: ENST00000589538
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,140,030 - 10,143,901 (-)Ensembl
RefSeq Acc Id: ENST00000590619   ⟹   ENSP00000468062
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,177,319 - 10,180,381 (-)Ensembl
RefSeq Acc Id: ENST00000591239
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,141,697 - 10,143,791 (-)Ensembl
RefSeq Acc Id: ENST00000591764
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,159,944 - 10,166,666 (-)Ensembl
RefSeq Acc Id: ENST00000591798
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,351 - 10,135,517 (-)Ensembl
RefSeq Acc Id: ENST00000592054   ⟹   ENSP00000468359
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,175,563 - 10,194,626 (-)Ensembl
RefSeq Acc Id: ENST00000592342   ⟹   ENSP00000465993
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,175,542 - 10,231,273 (-)Ensembl
RefSeq Acc Id: ENST00000592705   ⟹   ENSP00000466657
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,346 - 10,194,934 (-)Ensembl
RefSeq Acc Id: ENST00000593049
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,140,280 - 10,142,896 (-)Ensembl
RefSeq Acc Id: ENST00000676604
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,357 - 10,179,734 (-)Ensembl
RefSeq Acc Id: ENST00000676610   ⟹   ENSP00000504236
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,360 - 10,194,955 (-)Ensembl
RefSeq Acc Id: ENST00000676820
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,357 - 10,194,955 (-)Ensembl
RefSeq Acc Id: ENST00000676868
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,357 - 10,164,887 (-)Ensembl
RefSeq Acc Id: ENST00000677013   ⟹   ENSP00000503135
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,357 - 10,194,953 (-)Ensembl
RefSeq Acc Id: ENST00000677038
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,358 - 10,139,231 (-)Ensembl
RefSeq Acc Id: ENST00000677135
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,394 - 10,134,561 (-)Ensembl
RefSeq Acc Id: ENST00000677250   ⟹   ENSP00000502894
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,357 - 10,194,953 (-)Ensembl
RefSeq Acc Id: ENST00000677616   ⟹   ENSP00000503055
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,357 - 10,180,856 (-)Ensembl
RefSeq Acc Id: ENST00000677634   ⟹   ENSP00000504246
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,357 - 10,194,955 (-)Ensembl
RefSeq Acc Id: ENST00000677685   ⟹   ENSP00000503407
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,357 - 10,194,932 (-)Ensembl
RefSeq Acc Id: ENST00000677783
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,357 - 10,164,673 (-)Ensembl
RefSeq Acc Id: ENST00000677946   ⟹   ENSP00000504202
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,424 - 10,194,955 (-)Ensembl
RefSeq Acc Id: ENST00000678024
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,357 - 10,177,949 (-)Ensembl
RefSeq Acc Id: ENST00000678107
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,357 - 10,140,618 (-)Ensembl
RefSeq Acc Id: ENST00000678239
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,135,245 - 10,140,467 (-)Ensembl
RefSeq Acc Id: ENST00000678647
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,358 - 10,151,747 (-)Ensembl
RefSeq Acc Id: ENST00000678694
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,357 - 10,162,947 (-)Ensembl
RefSeq Acc Id: ENST00000678804   ⟹   ENSP00000503853
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,370 - 10,194,955 (-)Ensembl
RefSeq Acc Id: ENST00000678851
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,360 - 10,138,118 (-)Ensembl
RefSeq Acc Id: ENST00000678957
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,357 - 10,141,934 (-)Ensembl
RefSeq Acc Id: ENST00000679100
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,357 - 10,152,005 (-)Ensembl
RefSeq Acc Id: ENST00000679103   ⟹   ENSP00000503151
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,357 - 10,194,955 (-)Ensembl
RefSeq Acc Id: ENST00000679313   ⟹   ENSP00000504512
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1910,133,370 - 10,194,955 (-)Ensembl
RefSeq Acc Id: NM_001130823   ⟹   NP_001124295
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381910,133,346 - 10,194,953 (-)NCBI
GRCh371910,244,021 - 10,305,783 (-)NCBI
HuRef199,824,670 - 9,886,268 (-)ENTREZGENE
CHM1_11910,244,305 - 10,306,077 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001318730   ⟹   NP_001305659
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381910,133,346 - 10,194,953 (-)NCBI
CHM1_11910,244,305 - 10,305,996 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001318731   ⟹   NP_001305660
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381910,133,346 - 10,194,953 (-)NCBI
CHM1_11910,244,305 - 10,305,996 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001379   ⟹   NP_001370
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381910,133,346 - 10,194,953 (-)NCBI
GRCh371910,244,021 - 10,305,783 (-)NCBI
Build 361910,105,022 - 10,166,811 (-)NCBI Archive
HuRef199,824,670 - 9,886,268 (-)ENTREZGENE
CHM1_11910,244,305 - 10,306,077 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_001370   ⟸   NM_001379
- Peptide Label: isoform b
- UniProtKB: P26358 (UniProtKB/Swiss-Prot),   I6L9H2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001124295   ⟸   NM_001130823
- Peptide Label: isoform a
- UniProtKB: P26358 (UniProtKB/Swiss-Prot),   I6L9H2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001305660   ⟸   NM_001318731
- Peptide Label: isoform d
- UniProtKB: P26358 (UniProtKB/Swiss-Prot),   I6L9H2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001305659   ⟸   NM_001318730
- Peptide Label: isoform c
- UniProtKB: P26358 (UniProtKB/Swiss-Prot),   I6L9H2 (UniProtKB/TrEMBL),   Q59FP7 (UniProtKB/TrEMBL)
- Sequence: