TMEM74B (transmembrane protein 74B) - Rat Genome Database

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Gene: TMEM74B (transmembrane protein 74B) Homo sapiens
Analyze
Symbol: TMEM74B
Name: transmembrane protein 74B
RGD ID: 1354046
HGNC Page HGNC:15893
Description: Predicted to be located in membrane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: C20orf46; FLJ11190; transmembrane protein C20orf46
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38201,180,570 - 1,189,409 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl201,180,561 - 1,185,415 (-)EnsemblGRCh38hg38GRCh38
GRCh37201,161,214 - 1,166,564 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36201,109,215 - 1,113,117 (-)NCBINCBI36Build 36hg18NCBI36
Build 34201,109,214 - 1,113,117NCBI
Celera201,257,551 - 1,261,455 (-)NCBICelera
Cytogenetic Map20p13NCBI
HuRef201,112,988 - 1,116,894 (-)NCBIHuRef
CHM1_1201,161,233 - 1,165,135 (-)NCBICHM1_1
T2T-CHM13v2.0201,227,788 - 1,236,631 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11780052   PMID:12477932   PMID:14702039   PMID:17474147   PMID:20944657   PMID:32393512  


Genomics

Comparative Map Data
TMEM74B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38201,180,570 - 1,189,409 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl201,180,561 - 1,185,415 (-)EnsemblGRCh38hg38GRCh38
GRCh37201,161,214 - 1,166,564 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36201,109,215 - 1,113,117 (-)NCBINCBI36Build 36hg18NCBI36
Build 34201,109,214 - 1,113,117NCBI
Celera201,257,551 - 1,261,455 (-)NCBICelera
Cytogenetic Map20p13NCBI
HuRef201,112,988 - 1,116,894 (-)NCBIHuRef
CHM1_1201,161,233 - 1,165,135 (-)NCBICHM1_1
T2T-CHM13v2.0201,227,788 - 1,236,631 (-)NCBIT2T-CHM13v2.0
Tmem74b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392151,543,294 - 151,558,665 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2151,543,928 - 151,554,077 (+)EnsemblGRCm39 Ensembl
GRCm382151,701,805 - 151,716,745 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2151,702,008 - 151,712,157 (+)EnsemblGRCm38mm10GRCm38
MGSCv372151,527,744 - 151,533,046 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362151,393,287 - 151,398,751 (+)NCBIMGSCv36mm8
Celera2157,518,887 - 157,524,197 (+)NCBICelera
Cytogenetic Map2G3NCBI
cM Map274.83NCBI
Tmem74b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83160,679,964 - 160,684,580 (+)NCBIGRCr8
mRatBN7.23140,219,592 - 140,224,208 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3140,219,412 - 140,235,872 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3144,124,133 - 144,128,749 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03152,707,940 - 152,712,556 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03150,448,291 - 150,452,897 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03147,219,442 - 147,226,949 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3147,226,004 - 147,226,702 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03153,575,272 - 153,579,554 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43142,043,961 - 142,047,717 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera3138,978,306 - 138,982,741 (+)NCBICelera
Cytogenetic Map3q41NCBI
Tmem74b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955596424,771 - 427,694 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955596424,771 - 427,694 (-)NCBIChiLan1.0ChiLan1.0
TMEM74B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2212,218,171 - 2,223,528 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1202,215,000 - 2,220,357 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0201,334,191 - 1,342,982 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1201,105,487 - 1,110,241 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl201,105,492 - 1,110,041 (-)Ensemblpanpan1.1panPan2
TMEM74B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12419,801,268 - 19,807,157 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2419,801,215 - 19,806,879 (+)NCBICanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2419,455,186 - 19,461,450 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02420,491,458 - 20,498,234 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2420,490,969 - 20,498,315 (+)EnsemblROS_Cfam_1.0 Ensembl
Tmem74b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640169,036,434 - 169,049,577 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648517,470,871 - 17,471,569 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648517,467,626 - 17,478,749 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM74B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1734,101,109 - 34,103,994 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11734,099,511 - 34,107,077 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21738,648,381 - 38,653,743 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM74B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_0236660871,779,400 - 1,780,140 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmem74b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247412,455,466 - 2,460,243 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247412,443,929 - 2,460,264 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in TMEM74B
14 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 20p13(chr20:89939-1360110)x1 copy number loss See cases [RCV000050841] Chr20:89939..1360110 [GRCh38]
Chr20:70580..1340754 [GRCh37]
Chr20:18580..1288754 [NCBI36]
Chr20:20p13
pathogenic
GRCh38/hg38 20p13(chr20:89939-1852477)x1 copy number loss See cases [RCV000050373] Chr20:89939..1852477 [GRCh38]
Chr20:70580..1833123 [GRCh37]
Chr20:18580..1781123 [NCBI36]
Chr20:20p13
pathogenic
GRCh38/hg38 20p13-11.21(chr20:89939-25697564)x3 copy number gain See cases [RCV000051227] Chr20:89939..25697564 [GRCh38]
Chr20:70580..25678200 [GRCh37]
Chr20:18580..25626200 [NCBI36]
Chr20:20p13-11.21
pathogenic
GRCh38/hg38 20p13-11.23(chr20:89939-19146279)x3 copy number gain See cases [RCV000051041] Chr20:89939..19146279 [GRCh38]
Chr20:70580..19126923 [GRCh37]
Chr20:18580..19074923 [NCBI36]
Chr20:20p13-11.23
pathogenic
GRCh38/hg38 20p13(chr20:828964-1241192)x3 copy number gain See cases [RCV000052732] Chr20:828964..1241192 [GRCh38]
Chr20:809607..1221836 [GRCh37]
Chr20:757607..1169836 [NCBI36]
Chr20:20p13
uncertain significance
GRCh38/hg38 20p13(chr20:89939-1939218)x1 copy number loss See cases [RCV000052735] Chr20:89939..1939218 [GRCh38]
Chr20:70580..1919864 [GRCh37]
Chr20:18580..1867864 [NCBI36]
Chr20:20p13
pathogenic
GRCh38/hg38 20p13(chr20:89939-1770567)x1 copy number loss See cases [RCV000052736] Chr20:89939..1770567 [GRCh38]
Chr20:70580..1751213 [GRCh37]
Chr20:18580..1699213 [NCBI36]
Chr20:20p13
pathogenic
GRCh38/hg38 20p13(chr20:89939-1668795)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052737]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052737]|See cases [RCV000052737] Chr20:89939..1668795 [GRCh38]
Chr20:70580..1649441 [GRCh37]
Chr20:18580..1597441 [NCBI36]
Chr20:20p13
pathogenic
GRCh38/hg38 20p13(chr20:121781-2290194)x1 copy number loss See cases [RCV000052738] Chr20:121781..2290194 [GRCh38]
Chr20:102422..2270840 [GRCh37]
Chr20:50422..2218840 [NCBI36]
Chr20:20p13
pathogenic
GRCh38/hg38 20p13-11.23(chr20:89939-19071495)x3 copy number gain See cases [RCV000052995] Chr20:89939..19071495 [GRCh38]
Chr20:70580..19052139 [GRCh37]
Chr20:18580..19000139 [NCBI36]
Chr20:20p13-11.23
pathogenic
GRCh38/hg38 20p13-11.22(chr20:89939-21787252)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052996]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052996]|See cases [RCV000052996] Chr20:89939..21787252 [GRCh38]
Chr20:70580..21767890 [GRCh37]
Chr20:18580..21715890 [NCBI36]
Chr20:20p13-11.22
pathogenic
GRCh38/hg38 20p13-12.1(chr20:89939-14818511)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052997]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052997]|See cases [RCV000052997] Chr20:89939..14818511 [GRCh38]
Chr20:70580..14799157 [GRCh37]
Chr20:18580..14747157 [NCBI36]
Chr20:20p13-12.1
pathogenic
NM_018354.2(TMEM74B):c.134G>A (p.Arg45Lys) single nucleotide variant Malignant melanoma [RCV000072526] Chr20:1181485 [GRCh38]
Chr20:1162129 [GRCh37]
Chr20:1110129 [NCBI36]
Chr20:20p13
not provided
GRCh37/hg19 20p13(chr20:71023-2129746)x1 copy number loss See cases [RCV000184090] Chr20:71023..2129746 [GRCh37]
Chr20:20p13
pathogenic
GRCh38/hg38 20p13-q11.1(chr20:80106-30227427)x3 copy number gain See cases [RCV000133996] Chr20:80106..30227427 [GRCh38]
Chr20:60747..29462103 [GRCh37]
Chr20:8747..28075764 [NCBI36]
Chr20:20p13-q11.1
pathogenic
GRCh38/hg38 20p13(chr20:89939-1494113)x1 copy number loss See cases [RCV000135804] Chr20:89939..1494113 [GRCh38]
Chr20:70580..1474759 [GRCh37]
Chr20:18580..1422759 [NCBI36]
Chr20:20p13
pathogenic
GRCh38/hg38 20p13(chr20:89939-1246891)x3 copy number gain See cases [RCV000135794] Chr20:89939..1246891 [GRCh38]
Chr20:70580..1227535 [GRCh37]
Chr20:18580..1175535 [NCBI36]
Chr20:20p13
uncertain significance
GRCh38/hg38 20p13-q13.33(chr20:99557-64277321)x3 copy number gain See cases [RCV000135859] Chr20:99557..64277321 [GRCh38]
Chr20:80198..62908674 [GRCh37]
Chr20:28198..62379118 [NCBI36]
Chr20:20p13-q13.33
pathogenic
GRCh38/hg38 20p13-12.1(chr20:80106-13029401)x3 copy number gain See cases [RCV000138677] Chr20:80106..13029401 [GRCh38]
Chr20:60747..13010049 [GRCh37]
Chr20:8747..12958049 [NCBI36]
Chr20:20p13-12.1
pathogenic
GRCh38/hg38 20p13(chr20:80093-1246766)x1 copy number loss See cases [RCV000139403] Chr20:80093..1246766 [GRCh38]
Chr20:60734..1227410 [GRCh37]
Chr20:8734..1175410 [NCBI36]
Chr20:20p13
pathogenic
GRCh38/hg38 20p13-12.3(chr20:80093-6386012)x3 copy number gain See cases [RCV000139597] Chr20:80093..6386012 [GRCh38]
Chr20:60734..6366659 [GRCh37]
Chr20:8734..6314659 [NCBI36]
Chr20:20p13-12.3
pathogenic
GRCh38/hg38 20p13-12.3(chr20:84402-6159078)x3 copy number gain See cases [RCV000141348] Chr20:84402..6159078 [GRCh38]
Chr20:65043..6139725 [GRCh37]
Chr20:13043..6087725 [NCBI36]
Chr20:20p13-12.3
pathogenic
GRCh38/hg38 20p13(chr20:209424-1852477)x3 copy number gain See cases [RCV000140876] Chr20:209424..1852477 [GRCh38]
Chr20:190065..1833123 [GRCh37]
Chr20:138065..1781123 [NCBI36]
Chr20:20p13
uncertain significance
GRCh38/hg38 20p13-11.1(chr20:80927-26324843)x3 copy number gain See cases [RCV000142017] Chr20:80927..26324843 [GRCh38]
Chr20:61568..26305479 [GRCh37]
Chr20:9568..26253479 [NCBI36]
Chr20:20p13-11.1
pathogenic
GRCh38/hg38 20p13-12.3(chr20:80927-5447679)x3 copy number gain See cases [RCV000142285] Chr20:80927..5447679 [GRCh38]
Chr20:61568..5428325 [GRCh37]
Chr20:9568..5376325 [NCBI36]
Chr20:20p13-12.3
uncertain significance
GRCh38/hg38 20p13(chr20:80106-1246891)x1 copy number loss See cases [RCV000142919] Chr20:80106..1246891 [GRCh38]
Chr20:60747..1227535 [GRCh37]
Chr20:8747..1175535 [NCBI36]
Chr20:20p13
likely pathogenic
GRCh38/hg38 20p13-11.23(chr20:80928-18688031)x3 copy number gain See cases [RCV000143426] Chr20:80928..18688031 [GRCh38]
Chr20:61569..18668675 [GRCh37]
Chr20:9569..18616675 [NCBI36]
Chr20:20p13-11.23
pathogenic
GRCh38/hg38 20p13(chr20:80927-1806080)x1 copy number loss See cases [RCV000143700] Chr20:80927..1806080 [GRCh38]
Chr20:61568..1786726 [GRCh37]
Chr20:9568..1734726 [NCBI36]
Chr20:20p13
likely pathogenic|uncertain significance
GRCh38/hg38 20p13(chr20:89939-1852477)x1 copy number loss See cases [RCV000148279] Chr20:89939..1852477 [GRCh38]
Chr20:70580..1833123 [GRCh37]
Chr20:18580..1781123 [NCBI36]
Chr20:20p13
pathogenic
GRCh37/hg19 20p13-12.3(chr20:121521-5564937)x3 copy number gain See cases [RCV000239772] Chr20:121521..5564937 [GRCh37]
Chr20:20p13-12.3
pathogenic
GRCh37/hg19 20p13-11.1(chr20:80198-26075841)x3 copy number gain See cases [RCV000239954] Chr20:80198..26075841 [GRCh37]
Chr20:20p13-11.1
pathogenic
GRCh37/hg19 20p13(chr20:61568-4914872)x3 copy number gain See cases [RCV000446883] Chr20:61568..4914872 [GRCh37]
Chr20:20p13
pathogenic
GRCh37/hg19 20p13(chr20:61568-1823540)x1 copy number loss See cases [RCV000446902] Chr20:61568..1823540 [GRCh37]
Chr20:20p13
pathogenic
GRCh37/hg19 20p13(chr20:121521-2073612)x1 copy number loss See cases [RCV000446640] Chr20:121521..2073612 [GRCh37]
Chr20:20p13
pathogenic
GRCh37/hg19 20p13(chr20:61568-1513319)x1 copy number loss See cases [RCV000445920] Chr20:61568..1513319 [GRCh37]
Chr20:20p13
pathogenic
GRCh37/hg19 20p13(chr20:61568-4904599)x3 copy number gain See cases [RCV000448397] Chr20:61568..4904599 [GRCh37]
Chr20:20p13
pathogenic
GRCh37/hg19 20p13(chr20:1164613-1229292)x3 copy number gain See cases [RCV000447748] Chr20:1164613..1229292 [GRCh37]
Chr20:20p13
uncertain significance
GRCh37/hg19 20p13-q11.21(chr20:80198-26208081)x3 copy number gain not provided [RCV000487461] Chr20:80198..26208081 [GRCh37]
Chr20:20p13-q11.21
pathogenic
GRCh37/hg19 20p13-12.3(chr20:213423-5483406)x3 copy number gain See cases [RCV000510531] Chr20:213423..5483406 [GRCh37]
Chr20:20p13-12.3
uncertain significance
GRCh37/hg19 20p13(chr20:381794-1268103)x3 copy number gain See cases [RCV000510434] Chr20:381794..1268103 [GRCh37]
Chr20:20p13
uncertain significance
GRCh37/hg19 20p13(chr20:61568-1651420)x1 copy number loss See cases [RCV000510423] Chr20:61568..1651420 [GRCh37]
Chr20:20p13
likely pathogenic
GRCh37/hg19 20p13(chr20:61568-2824960)x3 copy number gain See cases [RCV000511991] Chr20:61568..2824960 [GRCh37]
Chr20:20p13
uncertain significance
GRCh37/hg19 20p13-q13.33(chr20:61569-62915555)x3 copy number gain See cases [RCV000510832] Chr20:61569..62915555 [GRCh37]
Chr20:20p13-q13.33
pathogenic
NM_001304748.2(TMEM74B):c.89G>C (p.Gly30Ala) single nucleotide variant Inborn genetic diseases [RCV003288210] Chr20:1181530 [GRCh38]
Chr20:1162174 [GRCh37]
Chr20:20p13
uncertain significance
GRCh37/hg19 20p13-q13.33(chr20:61569-62915555) copy number gain See cases [RCV000512450] Chr20:61569..62915555 [GRCh37]
Chr20:20p13-q13.33
pathogenic
GRCh37/hg19 20p13-12.2(chr20:61568-10486106)x3 copy number gain See cases [RCV000512556] Chr20:61568..10486106 [GRCh37]
Chr20:20p13-12.2
likely pathogenic
GRCh37/hg19 20p13(chr20:61568-2010334)x1 copy number loss not provided [RCV000684132] Chr20:61568..2010334 [GRCh37]
Chr20:20p13
likely pathogenic
GRCh37/hg19 20p13-q13.33(chr20:63244-62948788)x3 copy number gain not provided [RCV000741058] Chr20:63244..62948788 [GRCh37]
Chr20:20p13-q13.33
pathogenic
GRCh37/hg19 20p13-q13.33(chr20:63244-62961294)x3 copy number gain not provided [RCV000741059] Chr20:63244..62961294 [GRCh37]
Chr20:20p13-q13.33
pathogenic
GRCh37/hg19 20p13-q13.33(chr20:63244-62912463)x3 copy number gain not provided [RCV000741057] Chr20:63244..62912463 [GRCh37]
Chr20:20p13-q13.33
pathogenic
NM_001304748.2(TMEM74B):c.631G>A (p.Val211Ile) single nucleotide variant Inborn genetic diseases [RCV003244862] Chr20:1180988 [GRCh38]
Chr20:1161632 [GRCh37]
Chr20:20p13
uncertain significance
GRCh37/hg19 20p13(chr20:61568-2269777)x1 copy number loss not provided [RCV001007065] Chr20:61568..2269777 [GRCh37]
Chr20:20p13
pathogenic
GRCh37/hg19 20p13(chr20:728577-1237670)x4 copy number gain not provided [RCV000849650] Chr20:728577..1237670 [GRCh37]
Chr20:20p13
uncertain significance
GRCh37/hg19 20p13(chr20:61568-1305971)x1 copy number loss not provided [RCV001007067] Chr20:61568..1305971 [GRCh37]
Chr20:20p13
pathogenic
NM_001304748.2(TMEM74B):c.617G>A (p.Arg206His) single nucleotide variant Inborn genetic diseases [RCV003248645] Chr20:1181002 [GRCh38]
Chr20:1161646 [GRCh37]
Chr20:20p13
uncertain significance
GRCh37/hg19 20p13(chr20:989820-1216980)x3 copy number gain not provided [RCV001007070] Chr20:989820..1216980 [GRCh37]
Chr20:20p13
uncertain significance
GRCh37/hg19 20p13-11.1(chr20:61568-26305479)x3 copy number gain not provided [RCV001007068] Chr20:61568..26305479 [GRCh37]
Chr20:20p13-11.1
pathogenic
GRCh37/hg19 20p13(chr20:61568-1823540) copy number loss not specified [RCV002052695] Chr20:61568..1823540 [GRCh37]
Chr20:20p13
pathogenic
NM_001304748.2(TMEM74B):c.52G>A (p.Glu18Lys) single nucleotide variant Inborn genetic diseases [RCV003286468] Chr20:1181567 [GRCh38]
Chr20:1162211 [GRCh37]
Chr20:20p13
uncertain significance
GRCh37/hg19 20p13(chr20:1015167-1403720)x3 copy number gain not provided [RCV002473606] Chr20:1015167..1403720 [GRCh37]
Chr20:20p13
uncertain significance
NM_001304748.2(TMEM74B):c.356T>C (p.Val119Ala) single nucleotide variant Inborn genetic diseases [RCV002731843] Chr20:1181263 [GRCh38]
Chr20:1161907 [GRCh37]
Chr20:20p13
uncertain significance
NM_001304748.2(TMEM74B):c.607G>A (p.Glu203Lys) single nucleotide variant Inborn genetic diseases [RCV002749870] Chr20:1181012 [GRCh38]
Chr20:1161656 [GRCh37]
Chr20:20p13
uncertain significance
NM_001304748.2(TMEM74B):c.470G>A (p.Arg157Gln) single nucleotide variant Inborn genetic diseases [RCV002749605] Chr20:1181149 [GRCh38]
Chr20:1161793 [GRCh37]
Chr20:20p13
uncertain significance
GRCh37/hg19 20p13(chr20:992980-1481478)x4 copy number gain not provided [RCV002475623] Chr20:992980..1481478 [GRCh37]
Chr20:20p13
uncertain significance
NM_001304748.2(TMEM74B):c.382G>A (p.Val128Ile) single nucleotide variant Inborn genetic diseases [RCV002733903] Chr20:1181237 [GRCh38]
Chr20:1161881 [GRCh37]
Chr20:20p13
uncertain significance
NM_001304748.2(TMEM74B):c.225C>G (p.Asn75Lys) single nucleotide variant Inborn genetic diseases [RCV002818701] Chr20:1181394 [GRCh38]
Chr20:1162038 [GRCh37]
Chr20:20p13
uncertain significance
NM_001304748.2(TMEM74B):c.350G>A (p.Arg117His) single nucleotide variant Inborn genetic diseases [RCV003000922] Chr20:1181269 [GRCh38]
Chr20:1161913 [GRCh37]
Chr20:20p13
uncertain significance
NM_001304748.2(TMEM74B):c.709G>T (p.Ala237Ser) single nucleotide variant Inborn genetic diseases [RCV002897174] Chr20:1180910 [GRCh38]
Chr20:1161554 [GRCh37]
Chr20:20p13
uncertain significance
NM_001304748.2(TMEM74B):c.554C>T (p.Thr185Met) single nucleotide variant Inborn genetic diseases [RCV002674782] Chr20:1181065 [GRCh38]
Chr20:1161709 [GRCh37]
Chr20:20p13
uncertain significance
NM_001304748.2(TMEM74B):c.205C>T (p.His69Tyr) single nucleotide variant Inborn genetic diseases [RCV003265446] Chr20:1181414 [GRCh38]
Chr20:1162058 [GRCh37]
Chr20:20p13
uncertain significance
GRCh38/hg38 20p13-11.21(chr20:87153-23635465)x3 copy number gain Renal agenesis [RCV003327640] Chr20:87153..23635465 [GRCh38]
Chr20:20p13-11.21
pathogenic
Single allele deletion not provided [RCV003448677] Chr20:61001..2316914 [GRCh37]
Chr20:20p13
pathogenic
GRCh37/hg19 20p13(chr20:61569-1794919)x3 copy number gain not provided [RCV003485206] Chr20:61569..1794919 [GRCh37]
Chr20:20p13
uncertain significance
GRCh37/hg19 20p13-12.2(chr20:61569-9542361)x3 copy number gain not provided [RCV003485207] Chr20:61569..9542361 [GRCh37]
Chr20:20p13-12.2
pathogenic
GRCh37/hg19 20p13-12.1(chr20:68351-16142323)x3 copy number gain not provided [RCV003885494] Chr20:68351..16142323 [GRCh37]
Chr20:20p13-12.1
pathogenic
GRCh37/hg19 20p13-11.21(chr20:68351-23860313)x3 copy number gain not provided [RCV003885495] Chr20:68351..23860313 [GRCh37]
Chr20:20p13-11.21
pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:733
Count of miRNA genes:497
Interacting mature miRNAs:540
Transcripts:ENST00000381894, ENST00000429036, ENST00000481747
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
G59692  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37201,162,516 - 1,162,641UniSTSGRCh37
Build 36201,110,516 - 1,110,641RGDNCBI36
Celera201,258,852 - 1,258,977RGD
Cytogenetic Map20p13UniSTS
HuRef201,114,289 - 1,114,414UniSTS
TNG Radiation Hybrid Map20760.0UniSTS
WIAF-2129  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37201,162,512 - 1,162,656UniSTSGRCh37
Build 36201,110,512 - 1,110,656RGDNCBI36
Celera201,258,848 - 1,258,992RGD
Cytogenetic Map20p13UniSTS
HuRef201,114,285 - 1,114,429UniSTS
GeneMap99-GB4 RH Map2011.04UniSTS
NCBI RH Map2010.0UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 285 96 352 57 132 37 982 78 1776 45 129 692 20 290 660 1
Low 2118 1925 1345 558 553 418 3150 2075 1914 339 1276 859 152 1 914 1965 3 2
Below cutoff 30 935 23 9 1020 10 208 37 39 31 47 52 2 163

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001304748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001304749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001387329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001387330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001387331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001387332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001387333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001387334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_018354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011529281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011529282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011529283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011529284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017027923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017027924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017027925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047440257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054323618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054323619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054323620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054323621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054323622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054323623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054323624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA861530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK126837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL031665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW628999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AX405830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AX878080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM545116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000381894   ⟹   ENSP00000371318
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl201,180,561 - 1,184,473 (-)Ensembl
RefSeq Acc Id: ENST00000429036   ⟹   ENSP00000400552
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl201,180,570 - 1,184,981 (-)Ensembl
RefSeq Acc Id: ENST00000481747
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl201,181,284 - 1,185,415 (-)Ensembl
RefSeq Acc Id: NM_001304748   ⟹   NP_001291677
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,180,570 - 1,184,981 (-)NCBI
CHM1_1201,161,223 - 1,165,337 (-)NCBI
T2T-CHM13v2.0201,227,788 - 1,232,203 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001304749   ⟹   NP_001291678
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,180,570 - 1,185,920 (-)NCBI
CHM1_1201,161,223 - 1,166,095 (-)NCBI
T2T-CHM13v2.0201,227,788 - 1,233,142 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001387329   ⟹   NP_001374258
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,180,570 - 1,185,920 (-)NCBI
T2T-CHM13v2.0201,227,788 - 1,233,142 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001387330   ⟹   NP_001374259
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,180,570 - 1,185,920 (-)NCBI
T2T-CHM13v2.0201,227,788 - 1,233,142 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001387331   ⟹   NP_001374260
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,180,570 - 1,185,920 (-)NCBI
T2T-CHM13v2.0201,227,788 - 1,233,142 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001387332   ⟹   NP_001374261
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,180,570 - 1,185,920 (-)NCBI
T2T-CHM13v2.0201,227,788 - 1,233,142 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001387333   ⟹   NP_001374262
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,180,570 - 1,185,920 (-)NCBI
T2T-CHM13v2.0201,227,788 - 1,233,142 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001387334   ⟹   NP_001374263
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,180,570 - 1,185,920 (-)NCBI
T2T-CHM13v2.0201,227,788 - 1,233,142 (-)NCBI
Sequence:
RefSeq Acc Id: NM_018354   ⟹   NP_060824
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,180,570 - 1,184,981 (-)NCBI
GRCh37201,161,213 - 1,166,077 (-)NCBI
Build 36201,109,215 - 1,113,117 (-)NCBI Archive
Celera201,257,551 - 1,261,455 (-)RGD
HuRef201,112,988 - 1,116,894 (-)RGD
CHM1_1201,161,223 - 1,165,135 (-)NCBI
T2T-CHM13v2.0201,227,788 - 1,232,203 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011529281   ⟹   XP_011527583
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,180,570 - 1,189,409 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017027923   ⟹   XP_016883412
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,180,570 - 1,186,460 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017027924   ⟹   XP_016883413
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,180,570 - 1,185,920 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017027925   ⟹   XP_016883414
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,180,570 - 1,184,981 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047440257   ⟹   XP_047296213
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,180,570 - 1,185,070 (-)NCBI
RefSeq Acc Id: XM_054323618   ⟹   XP_054179593
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0201,227,788 - 1,236,631 (-)NCBI
RefSeq Acc Id: XM_054323619   ⟹   XP_054179594
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0201,227,788 - 1,233,903 (-)NCBI
RefSeq Acc Id: XM_054323620   ⟹   XP_054179595
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0201,227,788 - 1,233,682 (-)NCBI
RefSeq Acc Id: XM_054323621   ⟹   XP_054179596
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0201,227,788 - 1,233,436 (-)NCBI
RefSeq Acc Id: XM_054323622   ⟹   XP_054179597
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0201,227,788 - 1,232,292 (-)NCBI
RefSeq Acc Id: XM_054323623   ⟹   XP_054179598
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0201,227,788 - 1,233,142 (-)NCBI
RefSeq Acc Id: XM_054323624   ⟹   XP_054179599
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0201,227,788 - 1,232,203 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001291677 (Get FASTA)   NCBI Sequence Viewer  
  NP_001291678 (Get FASTA)   NCBI Sequence Viewer  
  NP_001374258 (Get FASTA)   NCBI Sequence Viewer  
  NP_001374259 (Get FASTA)   NCBI Sequence Viewer  
  NP_001374260 (Get FASTA)   NCBI Sequence Viewer  
  NP_001374261 (Get FASTA)   NCBI Sequence Viewer  
  NP_001374262 (Get FASTA)   NCBI Sequence Viewer  
  NP_001374263 (Get FASTA)   NCBI Sequence Viewer  
  NP_060824 (Get FASTA)   NCBI Sequence Viewer  
  XP_011527583 (Get FASTA)   NCBI Sequence Viewer  
  XP_016883412 (Get FASTA)   NCBI Sequence Viewer  
  XP_016883413 (Get FASTA)   NCBI Sequence Viewer  
  XP_016883414 (Get FASTA)   NCBI Sequence Viewer  
  XP_047296213 (Get FASTA)   NCBI Sequence Viewer  
  XP_054179593 (Get FASTA)   NCBI Sequence Viewer  
  XP_054179594 (Get FASTA)   NCBI Sequence Viewer  
  XP_054179595 (Get FASTA)   NCBI Sequence Viewer  
  XP_054179596 (Get FASTA)   NCBI Sequence Viewer  
  XP_054179597 (Get FASTA)   NCBI Sequence Viewer  
  XP_054179598 (Get FASTA)   NCBI Sequence Viewer  
  XP_054179599 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein BAA92058 (Get FASTA)   NCBI Sequence Viewer  
  CAD34937 (Get FASTA)   NCBI Sequence Viewer  
  CAE90001 (Get FASTA)   NCBI Sequence Viewer  
  EAX10647 (Get FASTA)   NCBI Sequence Viewer  
  EAX10648 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000371318
  ENSP00000371318.3
  ENSP00000400552
  ENSP00000400552.2
GenBank Protein Q9NUR3 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_060824   ⟸   NM_018354
- Peptide Label: isoform 1
- UniProtKB: D3DVW5 (UniProtKB/Swiss-Prot),   Q9NUR3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001291678   ⟸   NM_001304749
- Peptide Label: isoform 2
- UniProtKB: Q9NUR3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001291677   ⟸   NM_001304748
- Peptide Label: isoform 1
- UniProtKB: D3DVW5 (UniProtKB/Swiss-Prot),   Q9NUR3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011527583   ⟸   XM_011529281
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_016883412   ⟸   XM_017027923
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_016883413   ⟸   XM_017027924
- Peptide Label: isoform X3
- UniProtKB: D3DVW5 (UniProtKB/Swiss-Prot),   Q9NUR3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_016883414   ⟸   XM_017027925
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: ENSP00000400552   ⟸   ENST00000429036
RefSeq Acc Id: ENSP00000371318   ⟸   ENST00000381894
RefSeq Acc Id: NP_001374258   ⟸   NM_001387329
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001374261   ⟸   NM_001387332
- Peptide Label: isoform 1
- UniProtKB: Q9NUR3 (UniProtKB/Swiss-Prot),   D3DVW5 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001374262   ⟸   NM_001387333
- Peptide Label: isoform 1
- UniProtKB: Q9NUR3 (UniProtKB/Swiss-Prot),   D3DVW5 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001374263   ⟸   NM_001387334
- Peptide Label: isoform 1
- UniProtKB: Q9NUR3 (UniProtKB/Swiss-Prot),   D3DVW5 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001374260   ⟸   NM_001387331
- Peptide Label: isoform 1
- UniProtKB: Q9NUR3 (UniProtKB/Swiss-Prot),   D3DVW5 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001374259   ⟸   NM_001387330
- Peptide Label: isoform 1
- UniProtKB: Q9NUR3 (UniProtKB/Swiss-Prot),   D3DVW5 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047296213   ⟸   XM_047440257
- Peptide Label: isoform X3
- UniProtKB: Q9NUR3 (UniProtKB/Swiss-Prot),   D3DVW5 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054179593   ⟸   XM_054323618
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054179594   ⟸   XM_054323619
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054179595   ⟸   XM_054323620
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054179596   ⟸   XM_054323621
- Peptide Label: isoform X3
- UniProtKB: Q9NUR3 (UniProtKB/Swiss-Prot),   D3DVW5 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054179598   ⟸   XM_054323623
- Peptide Label: isoform X3
- UniProtKB: Q9NUR3 (UniProtKB/Swiss-Prot),   D3DVW5 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054179597   ⟸   XM_054323622
- Peptide Label: isoform X3
- UniProtKB: Q9NUR3 (UniProtKB/Swiss-Prot),   D3DVW5 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054179599   ⟸   XM_054323624
- Peptide Label: isoform X4

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9NUR3-F1-model_v2 AlphaFold Q9NUR3 1-256 view protein structure

Promoters
RGD ID:6798585
Promoter ID:HG_KWN:38318
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562
Transcripts:OTTHUMT00000077497
Position:
Human AssemblyChrPosition (strand)Source
Build 36201,113,811 - 1,114,312 (-)MPROMDB
RGD ID:13206103
Promoter ID:EPDNEW_H26632
Type:initiation region
Name:TMEM74B_2
Description:transmembrane protein 74B
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H26633  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,184,418 - 1,184,478EPDNEW
RGD ID:13206105
Promoter ID:EPDNEW_H26633
Type:initiation region
Name:TMEM74B_1
Description:transmembrane protein 74B
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H26632  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,185,515 - 1,185,575EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:15893 AgrOrtholog
COSMIC TMEM74B COSMIC
Ensembl Genes ENSG00000125895 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000381894 ENTREZGENE
  ENST00000381894.3 UniProtKB/Swiss-Prot
  ENST00000429036 ENTREZGENE, UniProtKB/TrEMBL
  ENST00000429036.2 UniProtKB/Swiss-Prot
GTEx ENSG00000125895 GTEx
HGNC ID HGNC:15893 ENTREZGENE
Human Proteome Map TMEM74B Human Proteome Map
InterPro TMEM74-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:55321 UniProtKB/Swiss-Prot
NCBI Gene 55321 ENTREZGENE
PANTHER PTHR16125 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TRANSMEMBRANE PROTEIN 74B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA25759 PharmGKB
UniProt D3DVW5 ENTREZGENE
  Q5QPM3_HUMAN UniProtKB/TrEMBL
  Q9NUR3 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary D3DVW5 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-11-29 TMEM74B  transmembrane protein 74B  C20orf46  chromosome 20 open reading frame 46  Symbol and/or name change 5135510 APPROVED